RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 AMHR2Q16671 573 aa16.64■□□□□ 0.25
MARK3-213ENST00000558611 GRIN2BQ13224 1484 aa16.63■□□□□ 0.25
MARK3-213ENST00000558611 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
MARK3-213ENST00000558611 IRF6O14896 467 aa16.63■□□□□ 0.25
MARK3-213ENST00000558611 CCDC102AQ96A19 550 aa16.63■□□□□ 0.25
MARK3-213ENST00000558611 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
MARK3-213ENST00000558611 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
MARK3-213ENST00000558611 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
MARK3-213ENST00000558611 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
MARK3-213ENST00000558611 GRXCR2A6NFK2 248 aa16.61■□□□□ 0.25
MARK3-213ENST00000558611 MAP3K9P80192 1104 aa16.61■□□□□ 0.25
MARK3-213ENST00000558611 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
MARK3-213ENST00000558611 KIF3CO14782 793 aa16.59■□□□□ 0.25
MARK3-213ENST00000558611 PDCD7Q8N8D1 485 aaKnown RBP16.59■□□□□ 0.25
MARK3-213ENST00000558611 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
MARK3-213ENST00000558611 GNPATO15228 680 aa16.58■□□□□ 0.24
MARK3-213ENST00000558611 C2orf72A6NCS6 295 aa16.57■□□□□ 0.24
MARK3-213ENST00000558611 OSBPP22059 807 aa16.56■□□□□ 0.24
MARK3-213ENST00000558611 HIC1Q14526 733 aa16.56■□□□□ 0.24
MARK3-213ENST00000558611 PTGER2P43116 358 aa16.55■□□□□ 0.24
MARK3-213ENST00000558611 PARP9Q8IXQ6 854 aa16.55■□□□□ 0.24
MARK3-213ENST00000558611 FCHSD2O94868 740 aa16.54■□□□□ 0.24
MARK3-213ENST00000558611 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
MARK3-213ENST00000558611 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
MARK3-213ENST00000558611 GOPCQ9HD26 462 aa16.53■□□□□ 0.24
MARK3-213ENST00000558611 BOLA1Q9Y3E2 137 aa16.53■□□□□ 0.24
MARK3-213ENST00000558611 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
MARK3-213ENST00000558611 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
MARK3-213ENST00000558611 FLIIQ13045 1269 aa16.52■□□□□ 0.24
MARK3-213ENST00000558611 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
MARK3-213ENST00000558611 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
MARK3-213ENST00000558611 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
MARK3-213ENST00000558611 G3V3G9 751 aa16.48■□□□□ 0.23
MARK3-213ENST00000558611 IRX5P78411 483 aaPredicted RBP16.48■□□□□ 0.23
MARK3-213ENST00000558611 OCEL1Q9H607 264 aa16.48■□□□□ 0.23
MARK3-213ENST00000558611 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
MARK3-213ENST00000558611 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
MARK3-213ENST00000558611 CLCN6P51797 869 aa16.46■□□□□ 0.23
MARK3-213ENST00000558611 OXER1Q8TDS5 423 aa16.46■□□□□ 0.23
MARK3-213ENST00000558611 IER5LQ5T953 404 aa16.45■□□□□ 0.22
MARK3-213ENST00000558611 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
MARK3-213ENST00000558611 CUL7Q14999 1698 aa16.43■□□□□ 0.22
MARK3-213ENST00000558611 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
MARK3-213ENST00000558611 FECHP22830 423 aa16.43■□□□□ 0.22
MARK3-213ENST00000558611 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
MARK3-213ENST00000558611 TBC1D12O60347 775 aa16.42■□□□□ 0.22
MARK3-213ENST00000558611 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
MARK3-213ENST00000558611 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
MARK3-213ENST00000558611 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
MARK3-213ENST00000558611 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
MARK3-213ENST00000558611 DDX12PQ92771 950 aa16.4■□□□□ 0.22
MARK3-213ENST00000558611 CEP170Q5SW79 1584 aa16.39■□□□□ 0.21
MARK3-213ENST00000558611 ATN1P54259 1190 aaPredicted RBP16.39■□□□□ 0.21
MARK3-213ENST00000558611 PTGDRQ13258 359 aa16.39■□□□□ 0.21
MARK3-213ENST00000558611 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
MARK3-213ENST00000558611 PODXL2Q9NZ53 605 aa16.37■□□□□ 0.21
MARK3-213ENST00000558611 ONECUT3O60422 494 aaPredicted RBP16.36■□□□□ 0.21
MARK3-213ENST00000558611 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
MARK3-213ENST00000558611 GIGYF2Q6Y7W6 1299 aaKnown RBP16.35■□□□□ 0.21
MARK3-213ENST00000558611 NUP160Q12769 1436 aa16.35■□□□□ 0.21
MARK3-213ENST00000558611 EVI5O60447 810 aa16.33■□□□□ 0.2
MARK3-213ENST00000558611 PCMTD1Q96MG8 357 aaPredicted RBP16.33■□□□□ 0.2
MARK3-213ENST00000558611 ATMINO43313 823 aaPredicted RBP16.32■□□□□ 0.2
MARK3-213ENST00000558611 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
MARK3-213ENST00000558611 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
MARK3-213ENST00000558611 ASTLQ6HA08 431 aaPredicted RBP16.32■□□□□ 0.2
MARK3-213ENST00000558611 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
MARK3-213ENST00000558611 PLCG2P16885 1265 aa16.31■□□□□ 0.2
MARK3-213ENST00000558611 ARID3AQ99856 593 aa16.31■□□□□ 0.2
MARK3-213ENST00000558611 IGF1RP08069 1367 aa16.3■□□□□ 0.2
MARK3-213ENST00000558611 MS4A1P11836 297 aa16.3■□□□□ 0.2
MARK3-213ENST00000558611 TMEM92Q6UXU6 159 aa16.3■□□□□ 0.2
MARK3-213ENST00000558611 A6NJR5 290 aa16.29■□□□□ 0.2
MARK3-213ENST00000558611 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
MARK3-213ENST00000558611 APBB1O00213 710 aa16.28■□□□□ 0.2
MARK3-213ENST00000558611 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
MARK3-213ENST00000558611 TMUB1Q9BVT8 246 aa16.25■□□□□ 0.19
MARK3-213ENST00000558611 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
MARK3-213ENST00000558611 PTCD2Q8WV60 388 aaKnown RBP16.24■□□□□ 0.19
MARK3-213ENST00000558611 REPIN1Q9BWE0 567 aaKnown RBP16.24■□□□□ 0.19
MARK3-213ENST00000558611 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
MARK3-213ENST00000558611 CLCN1P35523 988 aa16.23■□□□□ 0.19
MARK3-213ENST00000558611 ANO8Q9HCE9 1232 aaPredicted RBP16.23■□□□□ 0.19
MARK3-213ENST00000558611 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
MARK3-213ENST00000558611 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
MARK3-213ENST00000558611 EPAS1Q99814 870 aa16.2■□□□□ 0.18
MARK3-213ENST00000558611 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
MARK3-213ENST00000558611 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
MARK3-213ENST00000558611 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
MARK3-213ENST00000558611 NPDC1Q9NQX5 325 aaPredicted RBP16.19■□□□□ 0.18
MARK3-213ENST00000558611 TRAK2O60296 914 aa16.18■□□□□ 0.18
MARK3-213ENST00000558611 PHF14O94880 888 aa16.18■□□□□ 0.18
MARK3-213ENST00000558611 KIAA0586Q9BVV6 1533 aa16.17■□□□□ 0.18
MARK3-213ENST00000558611 SLC34A2O95436 690 aa16.16■□□□□ 0.18
MARK3-213ENST00000558611 MCM6Q14566 821 aa16.16■□□□□ 0.18
MARK3-213ENST00000558611 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
MARK3-213ENST00000558611 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
MARK3-213ENST00000558611 SKIV2LQ15477 1246 aaKnown RBP16.15■□□□□ 0.18
MARK3-213ENST00000558611 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
MARK3-213ENST00000558611 CDHR5Q9HBB8 845 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms