RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRPM1-207ENST00000558445 CRBNQ96SW2 442 aa12.6□□□□□ -0.39
TRPM1-207ENST00000558445 CCDC39Q9UFE4 941 aa12.6□□□□□ -0.39
TRPM1-207ENST00000558445 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
TRPM1-207ENST00000558445 GOLGA6L6A8MZA4 724 aa12.6□□□□□ -0.39
TRPM1-207ENST00000558445 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
TRPM1-207ENST00000558445 CNPY4Q8N129 248 aa12.59□□□□□ -0.39
TRPM1-207ENST00000558445 PDCL2Q8N4E4 241 aa12.59□□□□□ -0.39
TRPM1-207ENST00000558445 ZBTB7CA1YPR0 619 aa12.59□□□□□ -0.39
TRPM1-207ENST00000558445 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
TRPM1-207ENST00000558445 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
TRPM1-207ENST00000558445 MCM5P33992 734 aa12.58□□□□□ -0.4
TRPM1-207ENST00000558445 SOGA1O94964 1423 aa12.57□□□□□ -0.4
TRPM1-207ENST00000558445 HS1BP3Q53T59 392 aa12.57□□□□□ -0.4
TRPM1-207ENST00000558445 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
TRPM1-207ENST00000558445 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
TRPM1-207ENST00000558445 MAPK8IP3Q9UPT6 1336 aa12.56□□□□□ -0.4
TRPM1-207ENST00000558445 DDX49Q9Y6V7 483 aaKnown RBP12.55□□□□□ -0.4
TRPM1-207ENST00000558445 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
TRPM1-207ENST00000558445 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
TRPM1-207ENST00000558445 DIAPH3Q9NSV4 1193 aa12.55□□□□□ -0.4
TRPM1-207ENST00000558445 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
TRPM1-207ENST00000558445 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
TRPM1-207ENST00000558445 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
TRPM1-207ENST00000558445 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
TRPM1-207ENST00000558445 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
TRPM1-207ENST00000558445 RALBP1Q15311 655 aa12.53□□□□□ -0.4
TRPM1-207ENST00000558445 CALRP27797 417 aaKnown RBP12.53□□□□□ -0.4
TRPM1-207ENST00000558445 PLIN1O60240 522 aa12.52□□□□□ -0.41
TRPM1-207ENST00000558445 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
TRPM1-207ENST00000558445 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
TRPM1-207ENST00000558445 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
TRPM1-207ENST00000558445 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
TRPM1-207ENST00000558445 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
TRPM1-207ENST00000558445 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
TRPM1-207ENST00000558445 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
TRPM1-207ENST00000558445 GTF2A1P52655 376 aaPredicted RBP12.49□□□□□ -0.41
TRPM1-207ENST00000558445 GABPB1Q06547 395 aaPredicted RBP12.49□□□□□ -0.41
TRPM1-207ENST00000558445 C8orf34Q49A92 452 aa12.49□□□□□ -0.41
TRPM1-207ENST00000558445 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
TRPM1-207ENST00000558445 IGSF3O75054 1194 aa12.48□□□□□ -0.41
TRPM1-207ENST00000558445 ZKSCAN5Q9Y2L8 839 aa12.48□□□□□ -0.41
TRPM1-207ENST00000558445 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
TRPM1-207ENST00000558445 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
TRPM1-207ENST00000558445 CTR9Q6PD62 1173 aa12.48□□□□□ -0.41
TRPM1-207ENST00000558445 SKAP1Q86WV1 359 aa12.48□□□□□ -0.41
TRPM1-207ENST00000558445 NOL7Q9UMY1 257 aaKnown RBP12.48□□□□□ -0.41
TRPM1-207ENST00000558445 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
TRPM1-207ENST00000558445 FEZ1Q99689 392 aa12.48□□□□□ -0.41
TRPM1-207ENST00000558445 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
TRPM1-207ENST00000558445 PPP1R9BQ96SB3 815 aa12.47□□□□□ -0.41
TRPM1-207ENST00000558445 CCDC9Q9Y3X0 531 aaKnown RBP12.47□□□□□ -0.41
TRPM1-207ENST00000558445 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
TRPM1-207ENST00000558445 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
TRPM1-207ENST00000558445 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.41
TRPM1-207ENST00000558445 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
TRPM1-207ENST00000558445 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
TRPM1-207ENST00000558445 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
TRPM1-207ENST00000558445 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
TRPM1-207ENST00000558445 ZBTB22O15209 634 aa12.45□□□□□ -0.42
TRPM1-207ENST00000558445 TEX35Q5T0J7 233 aa12.45□□□□□ -0.42
TRPM1-207ENST00000558445 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
TRPM1-207ENST00000558445 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
TRPM1-207ENST00000558445 OGFRQ9NZT2 677 aa12.44□□□□□ -0.42
TRPM1-207ENST00000558445 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-207ENST00000558445 CUX2O14529 1486 aa12.43□□□□□ -0.42
TRPM1-207ENST00000558445 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
TRPM1-207ENST00000558445 CWC15Q9P013 229 aaKnown RBP12.43□□□□□ -0.42
TRPM1-207ENST00000558445 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
TRPM1-207ENST00000558445 SLC20A2Q08357 652 aa12.42□□□□□ -0.42
TRPM1-207ENST00000558445 TRERF1Q96PN7 1200 aa12.42□□□□□ -0.42
TRPM1-207ENST00000558445 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
TRPM1-207ENST00000558445 MYCBPQ99417 103 aaPredicted RBP12.42□□□□□ -0.42
TRPM1-207ENST00000558445 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
TRPM1-207ENST00000558445 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
TRPM1-207ENST00000558445 GPS2Q13227 327 aa12.41□□□□□ -0.42
TRPM1-207ENST00000558445 MAPKBP1O60336 1514 aa12.41□□□□□ -0.42
TRPM1-207ENST00000558445 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
TRPM1-207ENST00000558445 CNKSR2Q8WXI2 1034 aa12.41□□□□□ -0.42
TRPM1-207ENST00000558445 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRPM1-207ENST00000558445 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.42
TRPM1-207ENST00000558445 PLCD4Q9BRC7 762 aa12.4□□□□□ -0.42
TRPM1-207ENST00000558445 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
TRPM1-207ENST00000558445 FOXD1Q16676 465 aa12.4□□□□□ -0.42
TRPM1-207ENST00000558445 YY1AP1Q9H869 796 aa12.4□□□□□ -0.42
TRPM1-207ENST00000558445 PLCB2Q00722 1185 aa12.4□□□□□ -0.43
TRPM1-207ENST00000558445 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
TRPM1-207ENST00000558445 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
TRPM1-207ENST00000558445 GEMIN8Q9NWZ8 242 aaKnown RBP12.39□□□□□ -0.43
TRPM1-207ENST00000558445 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
TRPM1-207ENST00000558445 PNISRQ8TF01 805 aaKnown RBP12.37□□□□□ -0.43
TRPM1-207ENST00000558445 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
TRPM1-207ENST00000558445 CAVIN1Q6NZI2 390 aaKnown RBP12.37□□□□□ -0.43
TRPM1-207ENST00000558445 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
TRPM1-207ENST00000558445 PHF14O94880 888 aa12.37□□□□□ -0.43
TRPM1-207ENST00000558445 PMFBP1Q8TBY8 1022 aa12.37□□□□□ -0.43
TRPM1-207ENST00000558445 KRT222Q8N1A0 295 aa12.36□□□□□ -0.43
TRPM1-207ENST00000558445 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRPM1-207ENST00000558445 TDO2P48775 406 aa12.35□□□□□ -0.43
TRPM1-207ENST00000558445 ANTXR1Q9H6X2 564 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms