RNA–Protein interactions for RNA: ENST00000558146.1

SPPL2A-202, Transcript of signal peptide peptidase like 2A, humanhuman

TSL 3

Gene SPPL2A, Length 328 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-202ENST00000558146 PTPREP23469 700 aa16.35■□□□□ 0.21
SPPL2A-202ENST00000558146 EPAS1Q99814 870 aa16.35■□□□□ 0.21
SPPL2A-202ENST00000558146 GRXCR2A6NFK2 248 aa16.32■□□□□ 0.2
SPPL2A-202ENST00000558146 VSIG10Q8N0Z9 540 aa16.32■□□□□ 0.2
SPPL2A-202ENST00000558146 RBM33Q96EV2 1170 aaKnown RBP16.32■□□□□ 0.2
SPPL2A-202ENST00000558146 MMRN1Q13201 1228 aa16.3■□□□□ 0.2
SPPL2A-202ENST00000558146 ADGRD1Q6QNK2 874 aa16.3■□□□□ 0.2
SPPL2A-202ENST00000558146 EN1Q05925 392 aaPredicted RBP16.28■□□□□ 0.2
SPPL2A-202ENST00000558146 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
SPPL2A-202ENST00000558146 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
SPPL2A-202ENST00000558146 TK2O00142 265 aa16.25■□□□□ 0.19
SPPL2A-202ENST00000558146 MAP3K7O43318 606 aa16.25■□□□□ 0.19
SPPL2A-202ENST00000558146 COL9A1P20849 921 aa16.25■□□□□ 0.19
SPPL2A-202ENST00000558146 MLLT3P42568 568 aaPredicted RBP16.24■□□□□ 0.19
SPPL2A-202ENST00000558146 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
SPPL2A-202ENST00000558146 C6orf132Q5T0Z8 1188 aa16.23■□□□□ 0.19
SPPL2A-202ENST00000558146 ZBED2Q9BTP6 218 aa16.23■□□□□ 0.19
SPPL2A-202ENST00000558146 OSBPP22059 807 aa16.21■□□□□ 0.19
SPPL2A-202ENST00000558146 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
SPPL2A-202ENST00000558146 VPS9D1Q9Y2B5 631 aa16.21■□□□□ 0.19
SPPL2A-202ENST00000558146 SEMA3EO15041 775 aa16.19■□□□□ 0.18
SPPL2A-202ENST00000558146 SLC4A5Q9BY07 1137 aa16.19■□□□□ 0.18
SPPL2A-202ENST00000558146 HRO43593 1189 aa16.18■□□□□ 0.18
SPPL2A-202ENST00000558146 PROX2Q3B8N5 592 aa16.16■□□□□ 0.18
SPPL2A-202ENST00000558146 RNF166Q96A37 237 aaPredicted RBP16.16■□□□□ 0.18
SPPL2A-202ENST00000558146 CDHR5Q9HBB8 845 aa16.15■□□□□ 0.18
SPPL2A-202ENST00000558146 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
SPPL2A-202ENST00000558146 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
SPPL2A-202ENST00000558146 BHMG1C9JSJ3 638 aaPredicted RBP16.06■□□□□ 0.16
SPPL2A-202ENST00000558146 STAC3Q96MF2 364 aa16.06■□□□□ 0.16
SPPL2A-202ENST00000558146 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
SPPL2A-202ENST00000558146 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
SPPL2A-202ENST00000558146 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
SPPL2A-202ENST00000558146 MRPL50Q8N5N7 158 aaKnown RBP16.01■□□□□ 0.15
SPPL2A-202ENST00000558146 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
SPPL2A-202ENST00000558146 KIAA1468Q9P260 1216 aa16.01■□□□□ 0.15
SPPL2A-202ENST00000558146 TSKSQ9UJT2 592 aa16.01■□□□□ 0.15
SPPL2A-202ENST00000558146 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
SPPL2A-202ENST00000558146 PRSS12P56730 875 aa15.98■□□□□ 0.15
SPPL2A-202ENST00000558146 NPDC1Q9NQX5 325 aaPredicted RBP15.98■□□□□ 0.15
SPPL2A-202ENST00000558146 ONECUT3O60422 494 aaPredicted RBP15.97■□□□□ 0.15
SPPL2A-202ENST00000558146 KCTD12Q96CX2 325 aaKnown RBP15.97■□□□□ 0.15
SPPL2A-202ENST00000558146 FAM198AQ9UFP1 575 aa15.96■□□□□ 0.15
SPPL2A-202ENST00000558146 SEPT9Q9UHD8 586 aaPredicted RBP15.96■□□□□ 0.15
SPPL2A-202ENST00000558146 NUTM2FA1L443 756 aa15.95■□□□□ 0.14
SPPL2A-202ENST00000558146 RBM26Q5T8P6 1007 aaKnown RBP15.94■□□□□ 0.14
SPPL2A-202ENST00000558146 SMYD5Q6GMV2 418 aa15.94■□□□□ 0.14
SPPL2A-202ENST00000558146 PADI6Q6TGC4 694 aa15.93■□□□□ 0.14
SPPL2A-202ENST00000558146 RBM27Q9P2N5 1060 aaKnown RBP15.93■□□□□ 0.14
SPPL2A-202ENST00000558146 GOLGA8CPA6NN73 597 aa15.92■□□□□ 0.14
SPPL2A-202ENST00000558146 PTGDRQ13258 359 aa15.92■□□□□ 0.14
SPPL2A-202ENST00000558146 PACS2Q86VP3 889 aa15.91■□□□□ 0.14
SPPL2A-202ENST00000558146 LAPTM4BQ86VI4 370 aa15.89■□□□□ 0.13
SPPL2A-202ENST00000558146 WNT2BQ93097 391 aa15.89■□□□□ 0.13
SPPL2A-202ENST00000558146 C3orf80F5H4A9 247 aa15.88■□□□□ 0.13
SPPL2A-202ENST00000558146 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
SPPL2A-202ENST00000558146 SMAPO00193 183 aa15.87■□□□□ 0.13
SPPL2A-202ENST00000558146 FAM98CQ17RN3 349 aaKnown RBP15.86■□□□□ 0.13
SPPL2A-202ENST00000558146 TTC13Q8NBP0 860 aa15.86■□□□□ 0.13
SPPL2A-202ENST00000558146 THSD4Q6ZMP0 1018 aa15.85■□□□□ 0.13
SPPL2A-202ENST00000558146 FCHSD2O94868 740 aa15.84■□□□□ 0.13
SPPL2A-202ENST00000558146 ZFRQ96KR1 1074 aaKnown RBP15.84■□□□□ 0.13
SPPL2A-202ENST00000558146 PNMA3Q9UL41 463 aa15.84■□□□□ 0.13
SPPL2A-202ENST00000558146 ANKK1Q8NFD2 765 aa15.83■□□□□ 0.12
SPPL2A-202ENST00000558146 TATDN2Q93075 761 aa15.83■□□□□ 0.12
SPPL2A-202ENST00000558146 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
SPPL2A-202ENST00000558146 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
SPPL2A-202ENST00000558146 NUDT18Q6ZVK8 323 aa15.81■□□□□ 0.12
SPPL2A-202ENST00000558146 HCSTQ9UBK5 93 aa15.81■□□□□ 0.12
SPPL2A-202ENST00000558146 GPR37O15354 613 aa15.8■□□□□ 0.12
SPPL2A-202ENST00000558146 BCAMP50895 628 aa15.79■□□□□ 0.12
SPPL2A-202ENST00000558146 PTPN5P54829 565 aa15.79■□□□□ 0.12
SPPL2A-202ENST00000558146 TULP1O00294 542 aaPredicted RBP15.78■□□□□ 0.12
SPPL2A-202ENST00000558146 GPIHBP1Q8IV16 184 aa15.78■□□□□ 0.12
SPPL2A-202ENST00000558146 NACADO15069 1562 aa15.75■□□□□ 0.11
SPPL2A-202ENST00000558146 HIC1Q14526 733 aa15.75■□□□□ 0.11
SPPL2A-202ENST00000558146 SOWAHBA6NEL2 793 aa15.74■□□□□ 0.11
SPPL2A-202ENST00000558146 LRCH3Q96II8 777 aa15.73■□□□□ 0.11
SPPL2A-202ENST00000558146 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
SPPL2A-202ENST00000558146 ADGRG1Q9Y653 693 aa15.72■□□□□ 0.11
SPPL2A-202ENST00000558146 SAMD7Q7Z3H4 446 aa15.71■□□□□ 0.11
SPPL2A-202ENST00000558146 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.71■□□□□ 0.11
SPPL2A-202ENST00000558146 EYA1Q99502 592 aa15.7■□□□□ 0.1
SPPL2A-202ENST00000558146 GNPATO15228 680 aa15.69■□□□□ 0.1
SPPL2A-202ENST00000558146 FECHP22830 423 aa15.69■□□□□ 0.1
SPPL2A-202ENST00000558146 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
SPPL2A-202ENST00000558146 BICRAQ9NZM4 1560 aa15.68■□□□□ 0.1
SPPL2A-202ENST00000558146 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
SPPL2A-202ENST00000558146 HPS5Q9UPZ3 1129 aa15.66■□□□□ 0.1
SPPL2A-202ENST00000558146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.65■□□□□ 0.1
SPPL2A-202ENST00000558146 RBM46Q8TBY0 533 aaKnown RBP15.65■□□□□ 0.1
SPPL2A-202ENST00000558146 WBP1LQ9NX94 342 aa15.64■□□□□ 0.09
SPPL2A-202ENST00000558146 RNF40O75150 1001 aa15.63■□□□□ 0.09
SPPL2A-202ENST00000558146 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
SPPL2A-202ENST00000558146 SWT1Q5T5J6 900 aaKnown RBP15.62■□□□□ 0.09
SPPL2A-202ENST00000558146 TSR3Q9UJK0 312 aaKnown RBP15.62■□□□□ 0.09
SPPL2A-202ENST00000558146 DNAJB2P25686 324 aa15.6■□□□□ 0.09
SPPL2A-202ENST00000558146 PXYLP1Q8TE99 480 aa15.58■□□□□ 0.08
SPPL2A-202ENST00000558146 RCCD1A6NED2 376 aa15.57■□□□□ 0.08
SPPL2A-202ENST00000558146 HDGFP51858 240 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms