RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RCAN3Q9UKA8 241 aa15.77■□□□□ 0.11
VIPAS39-211ENST00000557658 KDM2AQ9Y2K7 1162 aa15.77■□□□□ 0.11
VIPAS39-211ENST00000557658 NLRP13Q86W25 1043 aa15.75■□□□□ 0.11
VIPAS39-211ENST00000557658 EXOC6Q8TAG9 804 aa15.75■□□□□ 0.11
VIPAS39-211ENST00000557658 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
VIPAS39-211ENST00000557658 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
VIPAS39-211ENST00000557658 CARMIL2Q6F5E8 1435 aa15.74■□□□□ 0.11
VIPAS39-211ENST00000557658 TSPY4P0CV99 314 aa15.74■□□□□ 0.11
VIPAS39-211ENST00000557658 TSPY10P0CW01 314 aa15.74■□□□□ 0.11
VIPAS39-211ENST00000557658 PTPRGP23470 1445 aa15.73■□□□□ 0.11
VIPAS39-211ENST00000557658 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
VIPAS39-211ENST00000557658 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
VIPAS39-211ENST00000557658 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
VIPAS39-211ENST00000557658 MS4A1P11836 297 aa15.71■□□□□ 0.1
VIPAS39-211ENST00000557658 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
VIPAS39-211ENST00000557658 PDE4AP27815 886 aa15.7■□□□□ 0.1
VIPAS39-211ENST00000557658 TRPM1Q7Z4N2 1603 aa15.69■□□□□ 0.1
VIPAS39-211ENST00000557658 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
VIPAS39-211ENST00000557658 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
VIPAS39-211ENST00000557658 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
VIPAS39-211ENST00000557658 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
VIPAS39-211ENST00000557658 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
VIPAS39-211ENST00000557658 INSRP06213 1382 aa15.67■□□□□ 0.1
VIPAS39-211ENST00000557658 PRAG1Q86YV5 1406 aa15.67■□□□□ 0.1
VIPAS39-211ENST00000557658 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
VIPAS39-211ENST00000557658 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
VIPAS39-211ENST00000557658 ZMYM4Q5VZL5 1548 aa15.66■□□□□ 0.1
VIPAS39-211ENST00000557658 ABCA8O94911 1581 aa15.66■□□□□ 0.1
VIPAS39-211ENST00000557658 FAM135AQ9P2D6 1515 aa15.66■□□□□ 0.1
VIPAS39-211ENST00000557658 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
VIPAS39-211ENST00000557658 PER1O15534 1290 aaPredicted RBP15.65■□□□□ 0.1
VIPAS39-211ENST00000557658 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
VIPAS39-211ENST00000557658 ATP10BO94823 1461 aa15.64■□□□□ 0.09
VIPAS39-211ENST00000557658 LAMC1P11047 1609 aa15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 COL17A1Q9UMD9 1497 aaPredicted RBP15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 BLMP54132 1417 aaPredicted RBP15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 GPRASP1Q5JY77 1395 aa15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
VIPAS39-211ENST00000557658 PLEKHH2Q8IVE3 1493 aa15.62■□□□□ 0.09
VIPAS39-211ENST00000557658 CCDC141Q6ZP82 1450 aa15.62■□□□□ 0.09
VIPAS39-211ENST00000557658 NUP160Q12769 1436 aa15.62■□□□□ 0.09
VIPAS39-211ENST00000557658 FBLN2P98095 1184 aa15.6■□□□□ 0.09
VIPAS39-211ENST00000557658 PRDM15P57071 1507 aaPredicted RBP15.6■□□□□ 0.09
VIPAS39-211ENST00000557658 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
VIPAS39-211ENST00000557658 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
VIPAS39-211ENST00000557658 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
VIPAS39-211ENST00000557658 RSPH4AQ5TD94 716 aa15.59■□□□□ 0.09
VIPAS39-211ENST00000557658 NEFMP07197 916 aa15.59■□□□□ 0.09
VIPAS39-211ENST00000557658 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
VIPAS39-211ENST00000557658 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.09
VIPAS39-211ENST00000557658 CRBNQ96SW2 442 aa15.58■□□□□ 0.09
VIPAS39-211ENST00000557658 A2MP01023 1474 aa15.58■□□□□ 0.08
VIPAS39-211ENST00000557658 EIF2AK4Q9P2K8 1649 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-211ENST00000557658 PLIN1O60240 522 aa15.58■□□□□ 0.08
VIPAS39-211ENST00000557658 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
VIPAS39-211ENST00000557658 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.08
VIPAS39-211ENST00000557658 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
VIPAS39-211ENST00000557658 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
VIPAS39-211ENST00000557658 TESK2Q96S53 571 aa15.57■□□□□ 0.08
VIPAS39-211ENST00000557658 UNC13BO14795 1591 aa15.56■□□□□ 0.08
VIPAS39-211ENST00000557658 PANK3Q9H999 370 aa15.56■□□□□ 0.08
VIPAS39-211ENST00000557658 CDC42BPBQ9Y5S2 1711 aa15.56■□□□□ 0.08
VIPAS39-211ENST00000557658 PREX2Q70Z35 1606 aa15.56■□□□□ 0.08
VIPAS39-211ENST00000557658 MYO5CQ9NQX4 1742 aa15.56■□□□□ 0.08
VIPAS39-211ENST00000557658 TMF1P82094 1093 aa15.56■□□□□ 0.08
VIPAS39-211ENST00000557658 PLA2R1Q13018 1463 aa15.55■□□□□ 0.08
VIPAS39-211ENST00000557658 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
VIPAS39-211ENST00000557658 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.07
VIPAS39-211ENST00000557658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.074e-6■■■■□ 19.8
VIPAS39-211ENST00000557658 SYCP2Q9BX26 1530 aa15.5■□□□□ 0.07
VIPAS39-211ENST00000557658 CENPQQ7L2Z9 268 aaPredicted RBP15.49■□□□□ 0.07
VIPAS39-211ENST00000557658 KDM2BQ8NHM5 1336 aa15.49■□□□□ 0.07
VIPAS39-211ENST00000557658 ADAMTS8Q9UP79 889 aa15.49■□□□□ 0.07
VIPAS39-211ENST00000557658 RNF17Q9BXT8 1623 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-211ENST00000557658 ATP10AO60312 1499 aa15.48■□□□□ 0.07
VIPAS39-211ENST00000557658 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
VIPAS39-211ENST00000557658 C20orf194Q5TEA3 1177 aa15.48■□□□□ 0.07
VIPAS39-211ENST00000557658 SKAP1Q86WV1 359 aa15.48■□□□□ 0.07
VIPAS39-211ENST00000557658 PLXNC1O60486 1568 aa15.48■□□□□ 0.07
VIPAS39-211ENST00000557658 WDR43Q15061 677 aaKnown RBP eCLIP15.47■□□□□ 0.07
VIPAS39-211ENST00000557658 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
VIPAS39-211ENST00000557658 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
VIPAS39-211ENST00000557658 ARHGAP5Q13017 1502 aa15.46■□□□□ 0.07
VIPAS39-211ENST00000557658 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
VIPAS39-211ENST00000557658 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
VIPAS39-211ENST00000557658 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
VIPAS39-211ENST00000557658 IL27Q8NEV9 243 aa15.45■□□□□ 0.06
VIPAS39-211ENST00000557658 PLEKHH1Q9ULM0 1364 aa15.45■□□□□ 0.06
VIPAS39-211ENST00000557658 WDR7Q9Y4E6 1490 aa15.44■□□□□ 0.06
VIPAS39-211ENST00000557658 GOLGA2Q08379 1002 aa15.44■□□□□ 0.06
VIPAS39-211ENST00000557658 MAGI2Q86UL8 1455 aa15.43■□□□□ 0.06
VIPAS39-211ENST00000557658 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
VIPAS39-211ENST00000557658 DUOX2Q9NRD8 1548 aa15.43■□□□□ 0.06
VIPAS39-211ENST00000557658 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
VIPAS39-211ENST00000557658 ZNF521Q96K83 1311 aa15.42■□□□□ 0.06
VIPAS39-211ENST00000557658 TTC37Q6PGP7 1564 aa15.42■□□□□ 0.06
VIPAS39-211ENST00000557658 CDCA8Q53HL2 280 aa15.42■□□□□ 0.06
VIPAS39-211ENST00000557658 IQGAP1P46940 1657 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms