RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC00639-205ENST00000557440 RALBP1Q15311 655 aa18.19■□□□□ 0.5
LINC00639-205ENST00000557440 TARBP1Q13395 1621 aaKnown RBP18.19■□□□□ 0.5
LINC00639-205ENST00000557440 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
LINC00639-205ENST00000557440 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
LINC00639-205ENST00000557440 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
LINC00639-205ENST00000557440 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
LINC00639-205ENST00000557440 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
LINC00639-205ENST00000557440 FRAT1Q92837 279 aaPredicted RBP18.14■□□□□ 0.49
LINC00639-205ENST00000557440 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
LINC00639-205ENST00000557440 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
LINC00639-205ENST00000557440 ATP10BO94823 1461 aa18.14■□□□□ 0.49
LINC00639-205ENST00000557440 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
LINC00639-205ENST00000557440 STK26Q9P289 416 aa18.13■□□□□ 0.49
LINC00639-205ENST00000557440 LRRIQ1Q96JM4 1722 aa18.13■□□□□ 0.49
LINC00639-205ENST00000557440 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
LINC00639-205ENST00000557440 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
LINC00639-205ENST00000557440 PZPP20742 1482 aa18.13■□□□□ 0.49
LINC00639-205ENST00000557440 KIAA0556O60303 1618 aa18.11■□□□□ 0.49
LINC00639-205ENST00000557440 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
LINC00639-205ENST00000557440 ARHGAP5Q13017 1502 aa18.11■□□□□ 0.49
LINC00639-205ENST00000557440 RAPGEF6Q8TEU7 1601 aa18.11■□□□□ 0.49
LINC00639-205ENST00000557440 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
LINC00639-205ENST00000557440 KIF14Q15058 1648 aa18.09■□□□□ 0.49
LINC00639-205ENST00000557440 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
LINC00639-205ENST00000557440 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
LINC00639-205ENST00000557440 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
LINC00639-205ENST00000557440 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.49
LINC00639-205ENST00000557440 PBRM1Q86U86 1689 aa18.08■□□□□ 0.49
LINC00639-205ENST00000557440 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.49
LINC00639-205ENST00000557440 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.48
LINC00639-205ENST00000557440 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
LINC00639-205ENST00000557440 APAF1O14727 1248 aa18.07■□□□□ 0.48
LINC00639-205ENST00000557440 DHX29Q7Z478 1369 aaKnown RBP18.06■□□□□ 0.48
LINC00639-205ENST00000557440 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
LINC00639-205ENST00000557440 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
LINC00639-205ENST00000557440 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
LINC00639-205ENST00000557440 KDM5BQ9UGL1 1544 aa18.05■□□□□ 0.48
LINC00639-205ENST00000557440 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
LINC00639-205ENST00000557440 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
LINC00639-205ENST00000557440 MLECQ14165 292 aa18.03■□□□□ 0.48
LINC00639-205ENST00000557440 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
LINC00639-205ENST00000557440 DEKP35659 375 aaKnown RBP18.01■□□□□ 0.47
LINC00639-205ENST00000557440 ARXQ96QS3 562 aa18.01■□□□□ 0.47
LINC00639-205ENST00000557440 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
LINC00639-205ENST00000557440 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
LINC00639-205ENST00000557440 SPATA31E1Q6ZUB1 1445 aa18.01■□□□□ 0.47
LINC00639-205ENST00000557440 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
LINC00639-205ENST00000557440 MORC1Q86VD1 984 aa18■□□□□ 0.47
LINC00639-205ENST00000557440 PDE4AP27815 886 aa17.98■□□□□ 0.47
LINC00639-205ENST00000557440 RTN4Q9NQC3 1192 aaKnown RBP17.98■□□□□ 0.47
LINC00639-205ENST00000557440 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
LINC00639-205ENST00000557440 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
LINC00639-205ENST00000557440 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
LINC00639-205ENST00000557440 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
LINC00639-205ENST00000557440 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
LINC00639-205ENST00000557440 PPP2R1AP30153 589 aa17.97■□□□□ 0.47
LINC00639-205ENST00000557440 SMG6Q86US8 1419 aaKnown RBP17.97■□□□□ 0.47
LINC00639-205ENST00000557440 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
LINC00639-205ENST00000557440 NEFMP07197 916 aa17.96■□□□□ 0.47
LINC00639-205ENST00000557440 IPO9Q96P70 1041 aaKnown RBP17.96■□□□□ 0.47
LINC00639-205ENST00000557440 KANK1Q14678 1352 aa17.96■□□□□ 0.47
LINC00639-205ENST00000557440 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
LINC00639-205ENST00000557440 SRPK2P78362 688 aaKnown RBP17.95■□□□□ 0.46
LINC00639-205ENST00000557440 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
LINC00639-205ENST00000557440 SLC12A5Q9H2X9 1139 aa17.94■□□□□ 0.46
LINC00639-205ENST00000557440 TESK2Q96S53 571 aa17.94■□□□□ 0.46
LINC00639-205ENST00000557440 WASHC2CQ9Y4E1 1318 aa17.94■□□□□ 0.46
LINC00639-205ENST00000557440 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
LINC00639-205ENST00000557440 BCAR3O75815 825 aa17.92■□□□□ 0.46
LINC00639-205ENST00000557440 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
LINC00639-205ENST00000557440 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC00639-205ENST00000557440 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
LINC00639-205ENST00000557440 SYCP2Q9BX26 1530 aa17.91■□□□□ 0.46
LINC00639-205ENST00000557440 PER1O15534 1290 aaPredicted RBP17.91■□□□□ 0.46
LINC00639-205ENST00000557440 ERBINQ96RT1 1412 aa17.9■□□□□ 0.46
LINC00639-205ENST00000557440 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
LINC00639-205ENST00000557440 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
LINC00639-205ENST00000557440 PDE3BQ13370 1112 aa17.9■□□□□ 0.46
LINC00639-205ENST00000557440 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.46
LINC00639-205ENST00000557440 POGKQ9P215 609 aa17.89■□□□□ 0.45
LINC00639-205ENST00000557440 SOX12O15370 315 aa17.89■□□□□ 0.45
LINC00639-205ENST00000557440 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
LINC00639-205ENST00000557440 SPRYD3Q8NCJ5 442 aa17.87■□□□□ 0.45
LINC00639-205ENST00000557440 TCERG1O14776 1098 aaKnown RBP17.87■□□□□ 0.45
LINC00639-205ENST00000557440 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
LINC00639-205ENST00000557440 NUP160Q12769 1436 aa17.86■□□□□ 0.45
LINC00639-205ENST00000557440 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
LINC00639-205ENST00000557440 CABP2Q9NPB3 220 aa17.86■□□□□ 0.45
LINC00639-205ENST00000557440 FAM135AQ9P2D6 1515 aa17.84■□□□□ 0.45
LINC00639-205ENST00000557440 RALGAPBQ86X10 1494 aa17.84■□□□□ 0.45
LINC00639-205ENST00000557440 NUTM2FA1L443 756 aa17.84■□□□□ 0.45
LINC00639-205ENST00000557440 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
LINC00639-205ENST00000557440 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.45
LINC00639-205ENST00000557440 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
LINC00639-205ENST00000557440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC00639-205ENST00000557440 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
LINC00639-205ENST00000557440 GGNBP2Q9H3C7 697 aa17.81■□□□□ 0.44
LINC00639-205ENST00000557440 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
LINC00639-205ENST00000557440 BCORL1Q5H9F3 1711 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms