RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 DPYSL4O14531 572 aa10.05□□□□□ -0.8
FOXN3-215ENST00000557261 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
FOXN3-215ENST00000557261 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
FOXN3-215ENST00000557261 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
FOXN3-215ENST00000557261 APBB1O00213 710 aa10.03□□□□□ -0.8
FOXN3-215ENST00000557261 PRDM2Q13029 1718 aa10.02□□□□□ -0.81
FOXN3-215ENST00000557261 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
FOXN3-215ENST00000557261 CDAN1Q8IWY9 1227 aa10.01□□□□□ -0.81
FOXN3-215ENST00000557261 MICALL2Q8IY33 904 aa10□□□□□ -0.81
FOXN3-215ENST00000557261 MARVELD3Q96A59 401 aa10□□□□□ -0.81
FOXN3-215ENST00000557261 NPM2Q86SE8 214 aaKnown RBP9.99□□□□□ -0.81
FOXN3-215ENST00000557261 CCDC102AQ96A19 550 aa9.97□□□□□ -0.81
FOXN3-215ENST00000557261 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
FOXN3-215ENST00000557261 EMP3P54852 163 aa9.95□□□□□ -0.82
FOXN3-215ENST00000557261 CLUAP1Q96AJ1 413 aa9.95□□□□□ -0.82
FOXN3-215ENST00000557261 FECHP22830 423 aa9.94□□□□□ -0.82
FOXN3-215ENST00000557261 DSG2Q14126 1118 aa9.94□□□□□ -0.82
FOXN3-215ENST00000557261 PDIA6Q15084 440 aa9.94□□□□□ -0.82
FOXN3-215ENST00000557261 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
FOXN3-215ENST00000557261 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
FOXN3-215ENST00000557261 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
FOXN3-215ENST00000557261 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
FOXN3-215ENST00000557261 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
FOXN3-215ENST00000557261 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
FOXN3-215ENST00000557261 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
FOXN3-215ENST00000557261 CUX2O14529 1486 aa9.9□□□□□ -0.83
FOXN3-215ENST00000557261 CFTRP13569 1480 aa9.9□□□□□ -0.83
FOXN3-215ENST00000557261 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-215ENST00000557261 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
FOXN3-215ENST00000557261 IRF6O14896 467 aa9.89□□□□□ -0.83
FOXN3-215ENST00000557261 AMHR2Q16671 573 aa9.89□□□□□ -0.83
FOXN3-215ENST00000557261 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
FOXN3-215ENST00000557261 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
FOXN3-215ENST00000557261 MAP2K5Q13163 448 aa9.88□□□□□ -0.83
FOXN3-215ENST00000557261 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
FOXN3-215ENST00000557261 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
FOXN3-215ENST00000557261 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
FOXN3-215ENST00000557261 FLIIQ13045 1269 aa9.86□□□□□ -0.83
FOXN3-215ENST00000557261 HS3ST6Q96QI5 342 aa9.86□□□□□ -0.83
FOXN3-215ENST00000557261 LAMC3Q9Y6N6 1575 aa9.86□□□□□ -0.83
FOXN3-215ENST00000557261 TRAK2O60296 914 aa9.85□□□□□ -0.83
FOXN3-215ENST00000557261 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
FOXN3-215ENST00000557261 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
FOXN3-215ENST00000557261 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
FOXN3-215ENST00000557261 MS4A1P11836 297 aa9.84□□□□□ -0.83
FOXN3-215ENST00000557261 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
FOXN3-215ENST00000557261 POTEBQ6S5H4 581 aa9.84□□□□□ -0.83
FOXN3-215ENST00000557261 REPIN1Q9BWE0 567 aaKnown RBP9.84□□□□□ -0.83
FOXN3-215ENST00000557261 HOXB1P14653 301 aaPredicted RBP9.83□□□□□ -0.84
FOXN3-215ENST00000557261 BIVM-ERCC5R4GMW8 1640 aa9.82□□□□□ -0.84
FOXN3-215ENST00000557261 OSBPP22059 807 aa9.82□□□□□ -0.84
FOXN3-215ENST00000557261 CADPSQ9ULU8 1353 aa9.81□□□□□ -0.84
FOXN3-215ENST00000557261 GNPATO15228 680 aa9.81□□□□□ -0.84
FOXN3-215ENST00000557261 TTLL12Q14166 644 aaPredicted RBP9.81□□□□□ -0.84
FOXN3-215ENST00000557261 A6NJR5 290 aa9.8□□□□□ -0.84
FOXN3-215ENST00000557261 TOP2BQ02880 1626 aa9.8□□□□□ -0.84
FOXN3-215ENST00000557261 POM121Q96HA1 1249 aa9.79□□□□□ -0.84
FOXN3-215ENST00000557261 ZNF777Q9ULD5 760 aaPredicted RBP9.79□□□□□ -0.84
FOXN3-215ENST00000557261 ABCC8Q09428 1581 aa9.79□□□□□ -0.84
FOXN3-215ENST00000557261 MCM6Q14566 821 aa9.78□□□□□ -0.84
FOXN3-215ENST00000557261 GIGYF2Q6Y7W6 1299 aaKnown RBP9.78□□□□□ -0.84
FOXN3-215ENST00000557261 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
FOXN3-215ENST00000557261 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
FOXN3-215ENST00000557261 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
FOXN3-215ENST00000557261 FOXK1P85037 733 aa9.77□□□□□ -0.85
FOXN3-215ENST00000557261 DDX12PQ92771 950 aa9.77□□□□□ -0.85
FOXN3-215ENST00000557261 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
FOXN3-215ENST00000557261 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
FOXN3-215ENST00000557261 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
FOXN3-215ENST00000557261 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
FOXN3-215ENST00000557261 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
FOXN3-215ENST00000557261 GOPCQ9HD26 462 aa9.76□□□□□ -0.85
FOXN3-215ENST00000557261 ERBB3P21860 1342 aa9.76□□□□□ -0.85
FOXN3-215ENST00000557261 C2orf72A6NCS6 295 aa9.75□□□□□ -0.85
FOXN3-215ENST00000557261 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
FOXN3-215ENST00000557261 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-215ENST00000557261 KIF3CO14782 793 aa9.74□□□□□ -0.85
FOXN3-215ENST00000557261 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
FOXN3-215ENST00000557261 OXER1Q8TDS5 423 aa9.74□□□□□ -0.85
FOXN3-215ENST00000557261 FCHSD2O94868 740 aa9.73□□□□□ -0.85
FOXN3-215ENST00000557261 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
FOXN3-215ENST00000557261 HIC1Q14526 733 aa9.73□□□□□ -0.85
FOXN3-215ENST00000557261 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
FOXN3-215ENST00000557261 GPR153Q6NV75 609 aa9.73□□□□□ -0.85
FOXN3-215ENST00000557261 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
FOXN3-215ENST00000557261 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
FOXN3-215ENST00000557261 PROCA1Q8NCQ7 364 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-215ENST00000557261 EEA1Q15075 1411 aa9.72□□□□□ -0.85
FOXN3-215ENST00000557261 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
FOXN3-215ENST00000557261 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.86
FOXN3-215ENST00000557261 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
FOXN3-215ENST00000557261 PROSER2Q86WR7 435 aaPredicted RBP9.7□□□□□ -0.86
FOXN3-215ENST00000557261 CUX1P39880 1505 aa9.7□□□□□ -0.86
FOXN3-215ENST00000557261 DNMBPQ6XZF7 1577 aa9.7□□□□□ -0.86
FOXN3-215ENST00000557261 PTGDRQ13258 359 aa9.69□□□□□ -0.86
FOXN3-215ENST00000557261 FNBP4Q8N3X1 1017 aaPredicted RBP9.69□□□□□ -0.86
FOXN3-215ENST00000557261 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
FOXN3-215ENST00000557261 PHOX2BQ99453 314 aa9.69□□□□□ -0.86
FOXN3-215ENST00000557261 PDS5BQ9NTI5 1447 aa9.69□□□□□ -0.86
FOXN3-215ENST00000557261 KIF21AQ7Z4S6 1674 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms