RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 PROX2Q3B8N5 592 aa10.16□□□□□ -0.78
FCF1-208ENST00000556814 WBP1LQ9NX94 342 aa10.16□□□□□ -0.78
FCF1-208ENST00000556814 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
FCF1-208ENST00000556814 ZNF787Q6DD87 383 aa10.15□□□□□ -0.78
FCF1-208ENST00000556814 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
FCF1-208ENST00000556814 WDR70Q9NW82 654 aa10.14□□□□□ -0.79
FCF1-208ENST00000556814 KCNC4Q03721 635 aa10.13□□□□□ -0.79
FCF1-208ENST00000556814 PDE4AP27815 886 aa10.12□□□□□ -0.79
FCF1-208ENST00000556814 NBPF3Q9H094 633 aa10.12□□□□□ -0.79
FCF1-208ENST00000556814 COL9A1P20849 921 aa10.11□□□□□ -0.79
FCF1-208ENST00000556814 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
FCF1-208ENST00000556814 SOWAHBA6NEL2 793 aa10.1□□□□□ -0.79
FCF1-208ENST00000556814 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
FCF1-208ENST00000556814 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
FCF1-208ENST00000556814 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
FCF1-208ENST00000556814 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
FCF1-208ENST00000556814 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
FCF1-208ENST00000556814 PRKD2Q9BZL6 878 aa10.06□□□□□ -0.8
FCF1-208ENST00000556814 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
FCF1-208ENST00000556814 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
FCF1-208ENST00000556814 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
FCF1-208ENST00000556814 JPH4Q96JJ6 628 aa10.05□□□□□ -0.8
FCF1-208ENST00000556814 ZFRQ96KR1 1074 aaKnown RBP10.04□□□□□ -0.8
FCF1-208ENST00000556814 MFSD10Q14728 455 aa10.03□□□□□ -0.8
FCF1-208ENST00000556814 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
FCF1-208ENST00000556814 POTECB2RU33 542 aa10.01□□□□□ -0.81
FCF1-208ENST00000556814 EVI5O60447 810 aa10.01□□□□□ -0.81
FCF1-208ENST00000556814 BCANQ96GW7 911 aa10.01□□□□□ -0.81
FCF1-208ENST00000556814 KIAA1468Q9P260 1216 aa10.01□□□□□ -0.81
FCF1-208ENST00000556814 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
FCF1-208ENST00000556814 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
FCF1-208ENST00000556814 E2F4Q16254 413 aa9.99□□□□□ -0.81
FCF1-208ENST00000556814 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
FCF1-208ENST00000556814 PCDHGA10Q9Y5H3 936 aa9.97□□□□□ -0.81
FCF1-208ENST00000556814 NBR1Q14596 966 aa9.96□□□□□ -0.82
FCF1-208ENST00000556814 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
FCF1-208ENST00000556814 TJAP1Q5JTD0 557 aa9.95□□□□□ -0.82
FCF1-208ENST00000556814 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
FCF1-208ENST00000556814 PPP1R18Q6NYC8 613 aa9.94□□□□□ -0.82
FCF1-208ENST00000556814 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
FCF1-208ENST00000556814 HPS5Q9UPZ3 1129 aa9.94□□□□□ -0.82
FCF1-208ENST00000556814 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
FCF1-208ENST00000556814 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
FCF1-208ENST00000556814 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
FCF1-208ENST00000556814 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
FCF1-208ENST00000556814 TSR3Q9UJK0 312 aaKnown RBP9.91□□□□□ -0.82
FCF1-208ENST00000556814 ZNF516Q92618 1163 aa9.88□□□□□ -0.83
FCF1-208ENST00000556814 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.88□□□□□ -0.83
FCF1-208ENST00000556814 ARIH1Q9Y4X5 557 aaPredicted RBP9.88□□□□□ -0.83
FCF1-208ENST00000556814 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
FCF1-208ENST00000556814 TRIM67Q6ZTA4 783 aa9.86□□□□□ -0.83
FCF1-208ENST00000556814 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
FCF1-208ENST00000556814 FAM98CQ17RN3 349 aaKnown RBP9.83□□□□□ -0.84
FCF1-208ENST00000556814 LRCH3Q96II8 777 aa9.83□□□□□ -0.84
FCF1-208ENST00000556814 MTRQ99707 1265 aa9.83□□□□□ -0.84
FCF1-208ENST00000556814 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
FCF1-208ENST00000556814 MYT1Q01538 1121 aa9.81□□□□□ -0.84
FCF1-208ENST00000556814 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
FCF1-208ENST00000556814 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
FCF1-208ENST00000556814 SPDYE16A6NNV3 312 aaPredicted RBP9.79□□□□□ -0.84
FCF1-208ENST00000556814 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
FCF1-208ENST00000556814 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
FCF1-208ENST00000556814 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
FCF1-208ENST00000556814 TREML4Q6UXN2 200 aa9.79□□□□□ -0.84
FCF1-208ENST00000556814 DPYSL4O14531 572 aa9.78□□□□□ -0.84
FCF1-208ENST00000556814 ONECUT3O60422 494 aaPredicted RBP9.78□□□□□ -0.84
FCF1-208ENST00000556814 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
FCF1-208ENST00000556814 EMID1Q96A84 441 aaPredicted RBP9.78□□□□□ -0.84
FCF1-208ENST00000556814 PPP4CP60510 307 aa9.77□□□□□ -0.85
FCF1-208ENST00000556814 LOC100996750A0A140TA64 210 aa9.76□□□□□ -0.85
FCF1-208ENST00000556814 C3orf80F5H4A9 247 aa9.76□□□□□ -0.85
FCF1-208ENST00000556814 PDIA6Q15084 440 aa9.76□□□□□ -0.85
FCF1-208ENST00000556814 KRTAP4-6Q9BYQ5 205 aa9.76□□□□□ -0.85
FCF1-208ENST00000556814 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
FCF1-208ENST00000556814 PHF14O94880 888 aa9.74□□□□□ -0.85
FCF1-208ENST00000556814 SMYD5Q6GMV2 418 aa9.74□□□□□ -0.85
FCF1-208ENST00000556814 IL21Q9HBE4 155 aa9.74□□□□□ -0.85
FCF1-208ENST00000556814 SMAPO00193 183 aa9.73□□□□□ -0.85
FCF1-208ENST00000556814 SEMA3EO15041 775 aa9.73□□□□□ -0.85
FCF1-208ENST00000556814 SAMD7Q7Z3H4 446 aa9.73□□□□□ -0.85
FCF1-208ENST00000556814 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
FCF1-208ENST00000556814 TESPA1A2RU30 521 aaPredicted RBP9.72□□□□□ -0.85
FCF1-208ENST00000556814 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.86
FCF1-208ENST00000556814 APLP1P51693 650 aa9.69□□□□□ -0.86
FCF1-208ENST00000556814 FAM198AQ9UFP1 575 aa9.69□□□□□ -0.86
FCF1-208ENST00000556814 ST8SIA5O15466 376 aa9.68□□□□□ -0.86
FCF1-208ENST00000556814 PKDCCQ504Y2 493 aa9.66□□□□□ -0.86
FCF1-208ENST00000556814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.66□□□□□ -0.86
FCF1-208ENST00000556814 TSR1Q2NL82 804 aaKnown RBP9.64□□□□□ -0.87
FCF1-208ENST00000556814 DGAT1O75907 488 aa9.63□□□□□ -0.87
FCF1-208ENST00000556814 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
FCF1-208ENST00000556814 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
FCF1-208ENST00000556814 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
FCF1-208ENST00000556814 DACH1Q9UI36 760 aa9.63□□□□□ -0.87
FCF1-208ENST00000556814 COPS2P61201 443 aa9.62□□□□□ -0.87
FCF1-208ENST00000556814 GRXCR2A6NFK2 248 aa9.61□□□□□ -0.87
FCF1-208ENST00000556814 SLC19A1P41440 591 aa9.6□□□□□ -0.87
FCF1-208ENST00000556814 AAASQ9NRG9 546 aa9.6□□□□□ -0.87
FCF1-208ENST00000556814 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
FCF1-208ENST00000556814 PACS2Q86VP3 889 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms