RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
ATXN3-241ENST00000556374 PDIA6Q15084 440 aa8.83□□□□□ -1
ATXN3-241ENST00000556374 NBPF3Q9H094 633 aa8.83□□□□□ -1
ATXN3-241ENST00000556374 E2F4Q16254 413 aa8.82□□□□□ -1
ATXN3-241ENST00000556374 PAXIP1Q6ZW49 1069 aaPredicted RBP8.82□□□□□ -1
ATXN3-241ENST00000556374 DPYSL4O14531 572 aa8.81□□□□□ -1
ATXN3-241ENST00000556374 WDR70Q9NW82 654 aa8.81□□□□□ -1
ATXN3-241ENST00000556374 RABGEF1Q9UJ41 708 aa8.8□□□□□ -1
ATXN3-241ENST00000556374 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
ATXN3-241ENST00000556374 CFAP44Q96MT7 982 aa8.79□□□□□ -1
ATXN3-241ENST00000556374 LAPTM4BQ86VI4 370 aa8.78□□□□□ -1
ATXN3-241ENST00000556374 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
ATXN3-241ENST00000556374 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
ATXN3-241ENST00000556374 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
ATXN3-241ENST00000556374 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
ATXN3-241ENST00000556374 CERKQ8TCT0 537 aa8.75□□□□□ -1.01
ATXN3-241ENST00000556374 EN1Q05925 392 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-241ENST00000556374 THSD4Q6ZMP0 1018 aa8.73□□□□□ -1.01
ATXN3-241ENST00000556374 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
ATXN3-241ENST00000556374 COL9A1P20849 921 aa8.71□□□□□ -1.02
ATXN3-241ENST00000556374 PTPN5P54829 565 aa8.71□□□□□ -1.02
ATXN3-241ENST00000556374 WNT2BQ93097 391 aa8.71□□□□□ -1.02
ATXN3-241ENST00000556374 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
ATXN3-241ENST00000556374 NBR1Q14596 966 aa8.68□□□□□ -1.02
ATXN3-241ENST00000556374 ANKK1Q8NFD2 765 aa8.68□□□□□ -1.02
ATXN3-241ENST00000556374 DDX12PQ92771 950 aa8.68□□□□□ -1.02
ATXN3-241ENST00000556374 ARHGEF1Q92888 912 aaKnown RBP8.68□□□□□ -1.02
ATXN3-241ENST00000556374 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
ATXN3-241ENST00000556374 RGS20O76081 388 aa8.67□□□□□ -1.02
ATXN3-241ENST00000556374 PROX2Q3B8N5 592 aa8.67□□□□□ -1.02
ATXN3-241ENST00000556374 KIAA1468Q9P260 1216 aa8.67□□□□□ -1.02
ATXN3-241ENST00000556374 MAP3K7O43318 606 aa8.66□□□□□ -1.02
ATXN3-241ENST00000556374 PACS2Q86VP3 889 aa8.66□□□□□ -1.02
ATXN3-241ENST00000556374 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
ATXN3-241ENST00000556374 FAM98CQ17RN3 349 aaKnown RBP8.65□□□□□ -1.02
ATXN3-241ENST00000556374 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
ATXN3-241ENST00000556374 RBM33Q96EV2 1170 aaKnown RBP8.63□□□□□ -1.03
ATXN3-241ENST00000556374 OSBPP22059 807 aa8.62□□□□□ -1.03
ATXN3-241ENST00000556374 PRSS12P56730 875 aa8.62□□□□□ -1.03
ATXN3-241ENST00000556374 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
ATXN3-241ENST00000556374 CCDC180Q9P1Z9 1646 aa8.62□□□□□ -1.03
ATXN3-241ENST00000556374 TSR1Q2NL82 804 aaKnown RBP8.6□□□□□ -1.03
ATXN3-241ENST00000556374 CDCA7LQ96GN5 454 aa8.6□□□□□ -1.03
ATXN3-241ENST00000556374 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
ATXN3-241ENST00000556374 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-241ENST00000556374 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-241ENST00000556374 TSKSQ9UJT2 592 aa8.59□□□□□ -1.03
ATXN3-241ENST00000556374 TSHZ2Q9NRE2 1034 aa8.58□□□□□ -1.04
ATXN3-241ENST00000556374 NBPF26B4DH59 902 aa8.57□□□□□ -1.04
ATXN3-241ENST00000556374 NECTIN2Q92692 538 aa8.57□□□□□ -1.04
ATXN3-241ENST00000556374 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
ATXN3-241ENST00000556374 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-241ENST00000556374 TSR3Q9UJK0 312 aaKnown RBP8.57□□□□□ -1.04
ATXN3-241ENST00000556374 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
ATXN3-241ENST00000556374 TATDN2Q93075 761 aa8.54□□□□□ -1.04
ATXN3-241ENST00000556374 SEPT9Q9UHD8 586 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-241ENST00000556374 A0A0G2JS52 829 aa8.53□□□□□ -1.04
ATXN3-241ENST00000556374 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
ATXN3-241ENST00000556374 BCAMP50895 628 aa8.53□□□□□ -1.04
ATXN3-241ENST00000556374 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
ATXN3-241ENST00000556374 KCNV2Q8TDN2 545 aa8.53□□□□□ -1.04
ATXN3-241ENST00000556374 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
ATXN3-241ENST00000556374 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-241ENST00000556374 WBP1LQ9NX94 342 aa8.51□□□□□ -1.05
ATXN3-241ENST00000556374 PNMA3Q9UL41 463 aa8.5□□□□□ -1.05
ATXN3-241ENST00000556374 PPP4CP60510 307 aa8.49□□□□□ -1.05
ATXN3-241ENST00000556374 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
ATXN3-241ENST00000556374 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
ATXN3-241ENST00000556374 KCNC4Q03721 635 aa8.48□□□□□ -1.05
ATXN3-241ENST00000556374 CDHR5Q9HBB8 845 aa8.48□□□□□ -1.05
ATXN3-241ENST00000556374 SLC4A3P48751 1232 aa8.47□□□□□ -1.05
ATXN3-241ENST00000556374 NUDT18Q6ZVK8 323 aa8.46□□□□□ -1.06
ATXN3-241ENST00000556374 SAMD7Q7Z3H4 446 aa8.46□□□□□ -1.06
ATXN3-241ENST00000556374 PTGDRQ13258 359 aa8.45□□□□□ -1.06
ATXN3-241ENST00000556374 SLF2Q8IX21 1173 aa8.45□□□□□ -1.06
ATXN3-241ENST00000556374 MLLT3P42568 568 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-241ENST00000556374 SMYD5Q6GMV2 418 aa8.44□□□□□ -1.06
ATXN3-241ENST00000556374 PADI6Q6TGC4 694 aa8.44□□□□□ -1.06
ATXN3-241ENST00000556374 EYA1Q99502 592 aa8.44□□□□□ -1.06
ATXN3-241ENST00000556374 SMAPO00193 183 aa8.43□□□□□ -1.06
ATXN3-241ENST00000556374 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
ATXN3-241ENST00000556374 Q6ZNB5 142 aa8.42□□□□□ -1.06
ATXN3-241ENST00000556374 RBM46Q8TBY0 533 aaKnown RBP8.41□□□□□ -1.06
ATXN3-241ENST00000556374 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
ATXN3-241ENST00000556374 FCHSD2O94868 740 aa8.4□□□□□ -1.06
ATXN3-241ENST00000556374 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
ATXN3-241ENST00000556374 DNAJB2P25686 324 aa8.39□□□□□ -1.07
ATXN3-241ENST00000556374 TJAP1Q5JTD0 557 aa8.39□□□□□ -1.07
ATXN3-241ENST00000556374 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-241ENST00000556374 HIC1Q14526 733 aa8.37□□□□□ -1.07
ATXN3-241ENST00000556374 SEMA3EO15041 775 aa8.36□□□□□ -1.07
ATXN3-241ENST00000556374 OATP04181 439 aa8.36□□□□□ -1.07
ATXN3-241ENST00000556374 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
ATXN3-241ENST00000556374 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
ATXN3-241ENST00000556374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.35□□□□□ -1.07
ATXN3-241ENST00000556374 NUTM2FA1L443 756 aa8.35□□□□□ -1.07
ATXN3-241ENST00000556374 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
ATXN3-241ENST00000556374 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
ATXN3-241ENST00000556374 MTRQ99707 1265 aa8.34□□□□□ -1.07
ATXN3-241ENST00000556374 TMUB1Q9BVT8 246 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms