RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 TMEM121BQ9BXQ6 578 aaPredicted RBP12.32□□□□□ -0.44
SUPT16H-204ENST00000555943 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
SUPT16H-204ENST00000555943 KIF13AQ9H1H9 1805 aa12.32□□□□□ -0.44
SUPT16H-204ENST00000555943 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
SUPT16H-204ENST00000555943 PRXQ9BXM0 1461 aa12.3□□□□□ -0.44
SUPT16H-204ENST00000555943 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
SUPT16H-204ENST00000555943 C7P10643 843 aa12.3□□□□□ -0.44
SUPT16H-204ENST00000555943 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
SUPT16H-204ENST00000555943 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
SUPT16H-204ENST00000555943 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
SUPT16H-204ENST00000555943 G3V3G9 751 aa12.28□□□□□ -0.44
SUPT16H-204ENST00000555943 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
SUPT16H-204ENST00000555943 ADCY10Q96PN6 1610 aa12.28□□□□□ -0.44
SUPT16H-204ENST00000555943 ABCC10Q5T3U5 1492 aa12.27□□□□□ -0.44
SUPT16H-204ENST00000555943 IQGAP2Q13576 1575 aa12.27□□□□□ -0.44
SUPT16H-204ENST00000555943 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
SUPT16H-204ENST00000555943 ARHGEF1Q92888 912 aaKnown RBP12.26□□□□□ -0.45
SUPT16H-204ENST00000555943 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
SUPT16H-204ENST00000555943 KIF21BO75037 1637 aa12.26□□□□□ -0.45
SUPT16H-204ENST00000555943 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
SUPT16H-204ENST00000555943 PTPRGP23470 1445 aa12.25□□□□□ -0.45
SUPT16H-204ENST00000555943 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
SUPT16H-204ENST00000555943 PRKCSHP14314 528 aaPredicted RBP12.24□□□□□ -0.45
SUPT16H-204ENST00000555943 PPP1R15BQ5SWA1 713 aa12.24□□□□□ -0.45
SUPT16H-204ENST00000555943 DIP2BQ9P265 1576 aa12.23□□□□□ -0.45
SUPT16H-204ENST00000555943 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
SUPT16H-204ENST00000555943 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
SUPT16H-204ENST00000555943 FAM69CQ0P6D2 419 aa12.22□□□□□ -0.45
SUPT16H-204ENST00000555943 DSG2Q14126 1118 aa12.22□□□□□ -0.45
SUPT16H-204ENST00000555943 UGGT2Q9NYU1 1516 aa12.21□□□□□ -0.46
SUPT16H-204ENST00000555943 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
SUPT16H-204ENST00000555943 TPRNQ4KMQ1 711 aa12.2□□□□□ -0.46
SUPT16H-204ENST00000555943 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
SUPT16H-204ENST00000555943 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
SUPT16H-204ENST00000555943 KIF3CO14782 793 aa12.19□□□□□ -0.46
SUPT16H-204ENST00000555943 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
SUPT16H-204ENST00000555943 DISP1Q96F81 1524 aa12.18□□□□□ -0.46
SUPT16H-204ENST00000555943 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-204ENST00000555943 FOXK1P85037 733 aa12.18□□□□□ -0.46
SUPT16H-204ENST00000555943 CTTNBP2Q8WZ74 1663 aa12.17□□□□□ -0.46
SUPT16H-204ENST00000555943 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
SUPT16H-204ENST00000555943 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-204ENST00000555943 UACAQ9BZF9 1416 aa12.17□□□□□ -0.46
SUPT16H-204ENST00000555943 KDM6BO15054 1643 aa12.16□□□□□ -0.46
SUPT16H-204ENST00000555943 KIAA0556O60303 1618 aa12.15□□□□□ -0.46
SUPT16H-204ENST00000555943 GLI2P10070 1586 aa12.14□□□□□ -0.47
SUPT16H-204ENST00000555943 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
SUPT16H-204ENST00000555943 EMILIN3Q9NT22 766 aa12.14□□□□□ -0.47
SUPT16H-204ENST00000555943 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
SUPT16H-204ENST00000555943 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
SUPT16H-204ENST00000555943 ASXL2Q76L83 1435 aa12.12□□□□□ -0.47
SUPT16H-204ENST00000555943 SEMA3EO15041 775 aa12.12□□□□□ -0.47
SUPT16H-204ENST00000555943 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
SUPT16H-204ENST00000555943 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
SUPT16H-204ENST00000555943 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
SUPT16H-204ENST00000555943 ZCCHC11Q5TAX3 1644 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-204ENST00000555943 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
SUPT16H-204ENST00000555943 DPYSL4O14531 572 aa12.08□□□□□ -0.48
SUPT16H-204ENST00000555943 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
SUPT16H-204ENST00000555943 MAP3K4Q9Y6R4 1608 aa12.06□□□□□ -0.48
SUPT16H-204ENST00000555943 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-204ENST00000555943 CLIP1P30622 1438 aa12.05□□□□□ -0.48
SUPT16H-204ENST00000555943 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
SUPT16H-204ENST00000555943 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
SUPT16H-204ENST00000555943 TEX14Q8IWB6 1497 aa12.05□□□□□ -0.48
SUPT16H-204ENST00000555943 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
SUPT16H-204ENST00000555943 ABCA8O94911 1581 aa12.04□□□□□ -0.48
SUPT16H-204ENST00000555943 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
SUPT16H-204ENST00000555943 TULP1O00294 542 aaPredicted RBP12.02□□□□□ -0.49
SUPT16H-204ENST00000555943 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-204ENST00000555943 PDIA6Q15084 440 aa12.01□□□□□ -0.49
SUPT16H-204ENST00000555943 ADGRL1O94910 1474 aa12.01□□□□□ -0.49
SUPT16H-204ENST00000555943 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
SUPT16H-204ENST00000555943 CFAP43Q8NDM7 1665 aa12□□□□□ -0.49
SUPT16H-204ENST00000555943 POTEJP0CG39 1038 aa12□□□□□ -0.49
SUPT16H-204ENST00000555943 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
SUPT16H-204ENST00000555943 SPDYE16A6NNV3 312 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-204ENST00000555943 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
SUPT16H-204ENST00000555943 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
SUPT16H-204ENST00000555943 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
SUPT16H-204ENST00000555943 SAMD9Q5K651 1589 aa11.98□□□□□ -0.49
SUPT16H-204ENST00000555943 FHOD3Q2V2M9 1422 aa11.98□□□□□ -0.49
SUPT16H-204ENST00000555943 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
SUPT16H-204ENST00000555943 MAGI3Q5TCQ9 1506 aa11.97□□□□□ -0.49
SUPT16H-204ENST00000555943 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
SUPT16H-204ENST00000555943 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
SUPT16H-204ENST00000555943 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
SUPT16H-204ENST00000555943 CD109Q6YHK3 1445 aa11.95□□□□□ -0.5
SUPT16H-204ENST00000555943 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
SUPT16H-204ENST00000555943 HECW2Q9P2P5 1572 aa11.93□□□□□ -0.5
SUPT16H-204ENST00000555943 RAPGEF6Q8TEU7 1601 aa11.93□□□□□ -0.5
SUPT16H-204ENST00000555943 COL17A1Q9UMD9 1497 aaPredicted RBP11.92□□□□□ -0.5
SUPT16H-204ENST00000555943 PTCD2Q8WV60 388 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-204ENST00000555943 ATP10BO94823 1461 aa11.91□□□□□ -0.5
SUPT16H-204ENST00000555943 SLC34A2O95436 690 aa11.91□□□□□ -0.5
SUPT16H-204ENST00000555943 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
SUPT16H-204ENST00000555943 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
SUPT16H-204ENST00000555943 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
SUPT16H-204ENST00000555943 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
SUPT16H-204ENST00000555943 ARAP3Q8WWN8 1544 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms