RNA–Protein interactions for RNA: ENST00000555846.1

SOCS4-204, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-204ENST00000555846 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
SOCS4-204ENST00000555846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.53□□□□□ -0.24
SOCS4-204ENST00000555846 PZPP20742 1482 aa13.52□□□□□ -0.24
SOCS4-204ENST00000555846 CCER2I3L3R5 266 aa13.52□□□□□ -0.24
SOCS4-204ENST00000555846 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
SOCS4-204ENST00000555846 MBD5Q9P267 1494 aa13.5□□□□□ -0.25
SOCS4-204ENST00000555846 TMF1P82094 1093 aa13.5□□□□□ -0.25
SOCS4-204ENST00000555846 TTC37Q6PGP7 1564 aa13.5□□□□□ -0.25
SOCS4-204ENST00000555846 STK26Q9P289 416 aa13.49□□□□□ -0.25
SOCS4-204ENST00000555846 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
SOCS4-204ENST00000555846 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
SOCS4-204ENST00000555846 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
SOCS4-204ENST00000555846 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
SOCS4-204ENST00000555846 TRAK1Q9UPV9 953 aa13.47□□□□□ -0.25
SOCS4-204ENST00000555846 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
SOCS4-204ENST00000555846 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
SOCS4-204ENST00000555846 CCDC184Q52MB2 194 aa13.45□□□□□ -0.26
SOCS4-204ENST00000555846 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
SOCS4-204ENST00000555846 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
SOCS4-204ENST00000555846 SHANK2Q9UPX8 1470 aa13.45□□□□□ -0.26
SOCS4-204ENST00000555846 ZCCHC11Q5TAX3 1644 aaKnown RBP13.45□□□□□ -0.26
SOCS4-204ENST00000555846 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
SOCS4-204ENST00000555846 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
SOCS4-204ENST00000555846 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
SOCS4-204ENST00000555846 SUPT16HQ9Y5B9 1047 aaKnown RBP13.43□□□□□ -0.26
SOCS4-204ENST00000555846 ARHGEF12Q9NZN5 1544 aa13.43□□□□□ -0.26
SOCS4-204ENST00000555846 FAM135AQ9P2D6 1515 aa13.43□□□□□ -0.26
SOCS4-204ENST00000555846 TMEM132EQ6IEE7 984 aa13.42□□□□□ -0.26
SOCS4-204ENST00000555846 PANK3Q9H999 370 aa13.42□□□□□ -0.26
SOCS4-204ENST00000555846 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
SOCS4-204ENST00000555846 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
SOCS4-204ENST00000555846 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
SOCS4-204ENST00000555846 DHX29Q7Z478 1369 aaKnown RBP13.4□□□□□ -0.26
SOCS4-204ENST00000555846 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.26
SOCS4-204ENST00000555846 POGKQ9P215 609 aa13.4□□□□□ -0.26
SOCS4-204ENST00000555846 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
SOCS4-204ENST00000555846 MYO5CQ9NQX4 1742 aa13.39□□□□□ -0.27
SOCS4-204ENST00000555846 PREX2Q70Z35 1606 aa13.38□□□□□ -0.27
SOCS4-204ENST00000555846 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
SOCS4-204ENST00000555846 ADGBQ8N7X0 1667 aa13.38□□□□□ -0.27
SOCS4-204ENST00000555846 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
SOCS4-204ENST00000555846 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
SOCS4-204ENST00000555846 CDC42BPBQ9Y5S2 1711 aa13.36□□□□□ -0.27
SOCS4-204ENST00000555846 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
SOCS4-204ENST00000555846 ERBINQ96RT1 1412 aa13.35□□□□□ -0.27
SOCS4-204ENST00000555846 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
SOCS4-204ENST00000555846 SRPK2P78362 688 aaKnown RBP13.35□□□□□ -0.27
SOCS4-204ENST00000555846 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
SOCS4-204ENST00000555846 ADGRF5Q8IZF2 1346 aa13.35□□□□□ -0.27
SOCS4-204ENST00000555846 ZNF518AQ6AHZ1 1483 aa13.32□□□□□ -0.28
SOCS4-204ENST00000555846 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
SOCS4-204ENST00000555846 A2MP01023 1474 aa13.32□□□□□ -0.28
SOCS4-204ENST00000555846 RALBP1Q15311 655 aa13.31□□□□□ -0.28
SOCS4-204ENST00000555846 ABCC1P33527 1531 aa13.31□□□□□ -0.28
SOCS4-204ENST00000555846 CFAP65Q6ZU64 1925 aaKnown RBP13.3□□□□□ -0.28
SOCS4-204ENST00000555846 ATP7AQ04656 1500 aa13.3□□□□□ -0.28
SOCS4-204ENST00000555846 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
SOCS4-204ENST00000555846 IDI1Q13907 227 aa13.3□□□□□ -0.28
SOCS4-204ENST00000555846 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
SOCS4-204ENST00000555846 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
SOCS4-204ENST00000555846 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
SOCS4-204ENST00000555846 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
SOCS4-204ENST00000555846 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
SOCS4-204ENST00000555846 PRAG1Q86YV5 1406 aa13.27□□□□□ -0.28
SOCS4-204ENST00000555846 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.28
SOCS4-204ENST00000555846 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
SOCS4-204ENST00000555846 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
SOCS4-204ENST00000555846 NUTM2FA1L443 756 aa13.26□□□□□ -0.29
SOCS4-204ENST00000555846 CROCC2H7BZ55 1655 aa13.26□□□□□ -0.29
SOCS4-204ENST00000555846 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
SOCS4-204ENST00000555846 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
SOCS4-204ENST00000555846 RALGAPBQ86X10 1494 aa13.25□□□□□ -0.29
SOCS4-204ENST00000555846 DISP3Q9P2K9 1392 aa13.25□□□□□ -0.29
SOCS4-204ENST00000555846 NOS1P29475 1434 aa13.24□□□□□ -0.29
SOCS4-204ENST00000555846 STAC3Q96MF2 364 aa13.24□□□□□ -0.29
SOCS4-204ENST00000555846 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
SOCS4-204ENST00000555846 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
SOCS4-204ENST00000555846 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
SOCS4-204ENST00000555846 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
SOCS4-204ENST00000555846 YEATS2Q9ULM3 1422 aa13.22□□□□□ -0.29
SOCS4-204ENST00000555846 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
SOCS4-204ENST00000555846 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
SOCS4-204ENST00000555846 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
SOCS4-204ENST00000555846 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
SOCS4-204ENST00000555846 TESK2Q96S53 571 aa13.21□□□□□ -0.29
SOCS4-204ENST00000555846 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.3
SOCS4-204ENST00000555846 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
SOCS4-204ENST00000555846 SOX12O15370 315 aa13.2□□□□□ -0.3
SOCS4-204ENST00000555846 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
SOCS4-204ENST00000555846 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
SOCS4-204ENST00000555846 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
SOCS4-204ENST00000555846 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
SOCS4-204ENST00000555846 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
SOCS4-204ENST00000555846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
SOCS4-204ENST00000555846 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
SOCS4-204ENST00000555846 ATP10AO60312 1499 aa13.18□□□□□ -0.3
SOCS4-204ENST00000555846 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
SOCS4-204ENST00000555846 EVC2Q86UK5 1308 aa13.18□□□□□ -0.3
SOCS4-204ENST00000555846 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
SOCS4-204ENST00000555846 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms