RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 ARIH1Q9Y4X5 557 aaPredicted RBP7.34□□□□□ -1.23
GPHN-210ENST00000555668 DDX12PQ92771 950 aa7.32□□□□□ -1.24
GPHN-210ENST00000555668 ZBED2Q9BTP6 218 aa7.32□□□□□ -1.24
GPHN-210ENST00000555668 PPP1R3GB7ZBB8 358 aa7.31□□□□□ -1.24
GPHN-210ENST00000555668 COL9A1P20849 921 aa7.29□□□□□ -1.24
GPHN-210ENST00000555668 C6orf132Q5T0Z8 1188 aa7.29□□□□□ -1.24
GPHN-210ENST00000555668 RBM33Q96EV2 1170 aaKnown RBP7.29□□□□□ -1.24
GPHN-210ENST00000555668 BHMG1C9JSJ3 638 aaPredicted RBP7.28□□□□□ -1.24
GPHN-210ENST00000555668 PLCB2Q00722 1185 aa7.28□□□□□ -1.24
GPHN-210ENST00000555668 NBR1Q14596 966 aa7.28□□□□□ -1.24
GPHN-210ENST00000555668 HCSTQ9UBK5 93 aa7.28□□□□□ -1.24
GPHN-210ENST00000555668 MRPL50Q8N5N7 158 aaKnown RBP7.27□□□□□ -1.25
GPHN-210ENST00000555668 KCTD12Q96CX2 325 aaKnown RBP7.27□□□□□ -1.25
GPHN-210ENST00000555668 NBPF3Q9H094 633 aa7.27□□□□□ -1.25
GPHN-210ENST00000555668 GRXCR2A6NFK2 248 aa7.26□□□□□ -1.25
GPHN-210ENST00000555668 GOLGA8CPA6NN73 597 aa7.26□□□□□ -1.25
GPHN-210ENST00000555668 EN1Q05925 392 aaPredicted RBP7.26□□□□□ -1.25
GPHN-210ENST00000555668 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
GPHN-210ENST00000555668 RABGEF1Q9UJ41 708 aa7.26□□□□□ -1.25
GPHN-210ENST00000555668 MAP3K7O43318 606 aa7.25□□□□□ -1.25
GPHN-210ENST00000555668 ARHGEF1Q92888 912 aaKnown RBP7.25□□□□□ -1.25
GPHN-210ENST00000555668 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
GPHN-210ENST00000555668 TTBK1Q5TCY1 1321 aaPredicted RBP7.24□□□□□ -1.25
GPHN-210ENST00000555668 TSR1Q2NL82 804 aaKnown RBP7.23□□□□□ -1.25
GPHN-210ENST00000555668 KCNV2Q8TDN2 545 aa7.22□□□□□ -1.25
GPHN-210ENST00000555668 WNT2BQ93097 391 aa7.22□□□□□ -1.25
GPHN-210ENST00000555668 KIAA1468Q9P260 1216 aa7.22□□□□□ -1.25
GPHN-210ENST00000555668 TRIM6-TRIM34B2RNG4 842 aa7.21□□□□□ -1.26
GPHN-210ENST00000555668 OSBPP22059 807 aa7.21□□□□□ -1.26
GPHN-210ENST00000555668 PRIM1P49642 420 aaKnown RBP7.2□□□□□ -1.26
GPHN-210ENST00000555668 PTPN5P54829 565 aa7.2□□□□□ -1.26
GPHN-210ENST00000555668 LAPTM4BQ86VI4 370 aa7.2□□□□□ -1.26
GPHN-210ENST00000555668 P3H3Q8IVL6 736 aa7.2□□□□□ -1.26
GPHN-210ENST00000555668 CERKQ8TCT0 537 aa7.2□□□□□ -1.26
GPHN-210ENST00000555668 THSD4Q6ZMP0 1018 aa7.19□□□□□ -1.26
GPHN-210ENST00000555668 HAP1P54257 671 aaPredicted RBP7.18□□□□□ -1.26
GPHN-210ENST00000555668 PACS2Q86VP3 889 aa7.18□□□□□ -1.26
GPHN-210ENST00000555668 ANKK1Q8NFD2 765 aa7.18□□□□□ -1.26
GPHN-210ENST00000555668 PRSS12P56730 875 aa7.17□□□□□ -1.26
GPHN-210ENST00000555668 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
GPHN-210ENST00000555668 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
GPHN-210ENST00000555668 SEPT9Q9UHD8 586 aaPredicted RBP7.17□□□□□ -1.26
GPHN-210ENST00000555668 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
GPHN-210ENST00000555668 MLLT3P42568 568 aaPredicted RBP7.16□□□□□ -1.26
GPHN-210ENST00000555668 FAM98CQ17RN3 349 aaKnown RBP7.16□□□□□ -1.26
GPHN-210ENST00000555668 ZFRQ96KR1 1074 aaKnown RBP7.16□□□□□ -1.26
GPHN-210ENST00000555668 CDHR5Q9HBB8 845 aa7.15□□□□□ -1.26
GPHN-210ENST00000555668 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
GPHN-210ENST00000555668 BCAMP50895 628 aa7.12□□□□□ -1.27
GPHN-210ENST00000555668 NPDC1Q9NQX5 325 aaPredicted RBP7.12□□□□□ -1.27
GPHN-210ENST00000555668 RBM27Q9P2N5 1060 aaKnown RBP7.12□□□□□ -1.27
GPHN-210ENST00000555668 FAM198AQ9UFP1 575 aa7.12□□□□□ -1.27
GPHN-210ENST00000555668 NBPF26B4DH59 902 aa7.11□□□□□ -1.27
GPHN-210ENST00000555668 TATDN2Q93075 761 aa7.11□□□□□ -1.27
GPHN-210ENST00000555668 PNMA3Q9UL41 463 aa7.11□□□□□ -1.27
GPHN-210ENST00000555668 SMAPO00193 183 aa7.1□□□□□ -1.27
GPHN-210ENST00000555668 SEMA3EO15041 775 aa7.1□□□□□ -1.27
GPHN-210ENST00000555668 LRCH3Q96II8 777 aa7.1□□□□□ -1.27
GPHN-210ENST00000555668 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.1□□□□□ -1.27
GPHN-210ENST00000555668 NYAP1Q6ZVC0 841 aa7.09□□□□□ -1.27
GPHN-210ENST00000555668 KDM2AQ9Y2K7 1162 aa7.09□□□□□ -1.27
GPHN-210ENST00000555668 PADI6Q6TGC4 694 aa7.08□□□□□ -1.28
GPHN-210ENST00000555668 NUDT18Q6ZVK8 323 aa7.08□□□□□ -1.28
GPHN-210ENST00000555668 TTC13Q8NBP0 860 aa7.08□□□□□ -1.28
GPHN-210ENST00000555668 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
GPHN-210ENST00000555668 NUTM2FA1L443 756 aa7.07□□□□□ -1.28
GPHN-210ENST00000555668 C3orf80F5H4A9 247 aa7.07□□□□□ -1.28
GPHN-210ENST00000555668 WBP1LQ9NX94 342 aa7.07□□□□□ -1.28
GPHN-210ENST00000555668 HPS5Q9UPZ3 1129 aa7.07□□□□□ -1.28
GPHN-210ENST00000555668 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
GPHN-210ENST00000555668 PTGDRQ13258 359 aa7.06□□□□□ -1.28
GPHN-210ENST00000555668 SMYD5Q6GMV2 418 aa7.06□□□□□ -1.28
GPHN-210ENST00000555668 SAMD7Q7Z3H4 446 aa7.06□□□□□ -1.28
GPHN-210ENST00000555668 VSIG10Q8N0Z9 540 aa7.06□□□□□ -1.28
GPHN-210ENST00000555668 TESPA1A2RU30 521 aaPredicted RBP7.05□□□□□ -1.28
GPHN-210ENST00000555668 PPP4CP60510 307 aa7.05□□□□□ -1.28
GPHN-210ENST00000555668 IFFO2Q5TF58 517 aa7.05□□□□□ -1.28
GPHN-210ENST00000555668 FCHSD2O94868 740 aa7.03□□□□□ -1.28
GPHN-210ENST00000555668 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
GPHN-210ENST00000555668 EYA1Q99502 592 aa7.02□□□□□ -1.29
GPHN-210ENST00000555668 RBM26Q5T8P6 1007 aaKnown RBP7.01□□□□□ -1.29
GPHN-210ENST00000555668 RNF40O75150 1001 aa7□□□□□ -1.29
GPHN-210ENST00000555668 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
GPHN-210ENST00000555668 RBM46Q8TBY0 533 aaKnown RBP7□□□□□ -1.29
GPHN-210ENST00000555668 SLC4A3P48751 1232 aa6.99□□□□□ -1.29
GPHN-210ENST00000555668 KCNC4Q03721 635 aa6.99□□□□□ -1.29
GPHN-210ENST00000555668 SLF2Q8IX21 1173 aa6.99□□□□□ -1.29
GPHN-210ENST00000555668 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
GPHN-210ENST00000555668 ADGRG1Q9Y653 693 aa6.99□□□□□ -1.29
GPHN-210ENST00000555668 A0A0G2JS52 829 aa6.98□□□□□ -1.29
GPHN-210ENST00000555668 DNAJB2P25686 324 aa6.98□□□□□ -1.29
GPHN-210ENST00000555668 HIC1Q14526 733 aa6.98□□□□□ -1.29
GPHN-210ENST00000555668 RGS20O76081 388 aa6.96□□□□□ -1.3
GPHN-210ENST00000555668 OATP04181 439 aa6.96□□□□□ -1.3
GPHN-210ENST00000555668 FAM161AQ3B820 660 aa6.96□□□□□ -1.3
GPHN-210ENST00000555668 RCCD1A6NED2 376 aa6.95□□□□□ -1.3
GPHN-210ENST00000555668 GNPATO15228 680 aa6.95□□□□□ -1.3
GPHN-210ENST00000555668 APLP1P51693 650 aa6.95□□□□□ -1.3
GPHN-210ENST00000555668 TMEM134Q9H6X4 195 aa6.95□□□□□ -1.3
GPHN-210ENST00000555668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms