RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SUPT6HQ7KZ85 1726 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-206ENST00000555232 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-206ENST00000555232 PTPN23Q9H3S7 1636 aa16.12■□□□□ 0.17
ARHGEF40-206ENST00000555232 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
ARHGEF40-206ENST00000555232 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
ARHGEF40-206ENST00000555232 RGS3P49796 1198 aa16.11■□□□□ 0.17
ARHGEF40-206ENST00000555232 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
ARHGEF40-206ENST00000555232 ATP10BO94823 1461 aa16.1■□□□□ 0.17
ARHGEF40-206ENST00000555232 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
ARHGEF40-206ENST00000555232 NCOA1Q15788 1441 aa16.09■□□□□ 0.17
ARHGEF40-206ENST00000555232 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF40-206ENST00000555232 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
ARHGEF40-206ENST00000555232 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
ARHGEF40-206ENST00000555232 ANKRD30BQ9BXX2 1392 aa16.08■□□□□ 0.16
ARHGEF40-206ENST00000555232 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
ARHGEF40-206ENST00000555232 GPATCH8Q9UKJ3 1502 aaKnown RBP16.06■□□□□ 0.16
ARHGEF40-206ENST00000555232 A0A0G2JS52 829 aa16.06■□□□□ 0.16
ARHGEF40-206ENST00000555232 CABP2Q9NPB3 220 aa16.06■□□□□ 0.16
ARHGEF40-206ENST00000555232 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
ARHGEF40-206ENST00000555232 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
ARHGEF40-206ENST00000555232 CLUAP1Q96AJ1 413 aa16.05■□□□□ 0.16
ARHGEF40-206ENST00000555232 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
ARHGEF40-206ENST00000555232 MAGI3Q5TCQ9 1506 aa16.04■□□□□ 0.16
ARHGEF40-206ENST00000555232 SLC12A5Q9H2X9 1139 aa16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 CFAP53Q96M91 514 aa16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 PLEKHH2Q8IVE3 1493 aa16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
ARHGEF40-206ENST00000555232 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-206ENST00000555232 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
ARHGEF40-206ENST00000555232 FBXO31Q5XUX0 539 aaPredicted RBP16.02■□□□□ 0.15
ARHGEF40-206ENST00000555232 APAF1O14727 1248 aa16.01■□□□□ 0.15
ARHGEF40-206ENST00000555232 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-206ENST00000555232 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
ARHGEF40-206ENST00000555232 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
ARHGEF40-206ENST00000555232 GGNBP2Q9H3C7 697 aa16■□□□□ 0.15
ARHGEF40-206ENST00000555232 RALBP1Q15311 655 aa16■□□□□ 0.15
ARHGEF40-206ENST00000555232 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
ARHGEF40-206ENST00000555232 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
ARHGEF40-206ENST00000555232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.99■□□□□ 0.155e-7■□□□□ 10.3
ARHGEF40-206ENST00000555232 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
ARHGEF40-206ENST00000555232 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
ARHGEF40-206ENST00000555232 RBM33Q96EV2 1170 aaKnown RBP15.98■□□□□ 0.15
ARHGEF40-206ENST00000555232 AKNAQ7Z591 1439 aa15.97■□□□□ 0.15
ARHGEF40-206ENST00000555232 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
ARHGEF40-206ENST00000555232 ADAMTS8Q9UP79 889 aa15.97■□□□□ 0.15
ARHGEF40-206ENST00000555232 LTV1Q96GA3 475 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF40-206ENST00000555232 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF40-206ENST00000555232 UGGT2Q9NYU1 1516 aa15.96■□□□□ 0.15
ARHGEF40-206ENST00000555232 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 ADGRF5Q8IZF2 1346 aa15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 CEBPAP49715 358 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 NUTM2GQ5VZR2 741 aa15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF40-206ENST00000555232 EXOC6Q8TAG9 804 aa15.94■□□□□ 0.14
ARHGEF40-206ENST00000555232 ARXQ96QS3 562 aa15.94■□□□□ 0.14
ARHGEF40-206ENST00000555232 VGFO15240 615 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF40-206ENST00000555232 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
ARHGEF40-206ENST00000555232 SLC26A8Q96RN1 970 aa15.92■□□□□ 0.14
ARHGEF40-206ENST00000555232 EIF5BO60841 1220 aaKnown RBP15.92■□□□□ 0.14
ARHGEF40-206ENST00000555232 FBLN1P23142 703 aa15.92■□□□□ 0.14
ARHGEF40-206ENST00000555232 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
ARHGEF40-206ENST00000555232 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 CENPJQ9HC77 1338 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 ROCK1Q13464 1354 aa15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 TXNDC2Q86VQ3 553 aa15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 FTSJ3Q8IY81 847 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
ARHGEF40-206ENST00000555232 WDR62O43379 1518 aa15.9■□□□□ 0.14
ARHGEF40-206ENST00000555232 HDGFL2Q7Z4V5 671 aaPredicted RBP15.89■□□□□ 0.14
ARHGEF40-206ENST00000555232 SKAP1Q86WV1 359 aa15.89■□□□□ 0.14
ARHGEF40-206ENST00000555232 PRAM1Q96QH2 718 aa15.89■□□□□ 0.14
ARHGEF40-206ENST00000555232 CD109Q6YHK3 1445 aa15.89■□□□□ 0.13
ARHGEF40-206ENST00000555232 APBB1O00213 710 aa15.89■□□□□ 0.13
ARHGEF40-206ENST00000555232 IDI1Q13907 227 aa15.88■□□□□ 0.13
ARHGEF40-206ENST00000555232 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
ARHGEF40-206ENST00000555232 CEP170Q5SW79 1584 aa15.88■□□□□ 0.13
ARHGEF40-206ENST00000555232 HMOX1P09601 288 aa15.88■□□□□ 0.13
ARHGEF40-206ENST00000555232 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
ARHGEF40-206ENST00000555232 MTHFSP49914 203 aa15.86■□□□□ 0.13
ARHGEF40-206ENST00000555232 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
ARHGEF40-206ENST00000555232 PNISRQ8TF01 805 aaKnown RBP15.86■□□□□ 0.13
ARHGEF40-206ENST00000555232 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
ARHGEF40-206ENST00000555232 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
ARHGEF40-206ENST00000555232 ADGRL1O94910 1474 aa15.85■□□□□ 0.13
ARHGEF40-206ENST00000555232 FANCIQ9NVI1 1328 aa15.85■□□□□ 0.13
ARHGEF40-206ENST00000555232 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
ARHGEF40-206ENST00000555232 KIF14Q15058 1648 aa15.85■□□□□ 0.13
ARHGEF40-206ENST00000555232 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-206ENST00000555232 PMFBP1Q8TBY8 1022 aa15.84■□□□□ 0.13
ARHGEF40-206ENST00000555232 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
ARHGEF40-206ENST00000555232 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.13
ARHGEF40-206ENST00000555232 IL27Q8NEV9 243 aa15.83■□□□□ 0.13
ARHGEF40-206ENST00000555232 NUP160Q12769 1436 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms