RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
NUMB-212ENST00000554546 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
NUMB-212ENST00000554546 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
NUMB-212ENST00000554546 NCOA2Q15596 1464 aa14.27□□□□□ -0.12
NUMB-212ENST00000554546 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.12
NUMB-212ENST00000554546 JARID2Q92833 1246 aaPredicted RBP14.27□□□□□ -0.13
NUMB-212ENST00000554546 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.13
NUMB-212ENST00000554546 ZBTB7CA1YPR0 619 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 SEC24BO95487 1268 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 APPP05067 770 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 NASPP49321 788 aaPredicted RBP14.26□□□□□ -0.13
NUMB-212ENST00000554546 TSC1Q92574 1164 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
NUMB-212ENST00000554546 KDM2BQ8NHM5 1336 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 SASS6Q6UVJ0 657 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
NUMB-212ENST00000554546 CCDC7Q96M83 1385 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 SLC52A1Q9NWF4 448 aa14.26□□□□□ -0.13
NUMB-212ENST00000554546 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
NUMB-212ENST00000554546 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
NUMB-212ENST00000554546 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
NUMB-212ENST00000554546 TBC1D2Q9BYX2 928 aa14.25□□□□□ -0.13
NUMB-212ENST00000554546 PANK3Q9H999 370 aa14.24□□□□□ -0.13
NUMB-212ENST00000554546 PHLDB1Q86UU1 1377 aa14.23□□□□□ -0.13
NUMB-212ENST00000554546 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
NUMB-212ENST00000554546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
NUMB-212ENST00000554546 DDX11L8A8MPP1 907 aa14.23□□□□□ -0.13
NUMB-212ENST00000554546 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
NUMB-212ENST00000554546 POLR3GLQ9BT43 218 aa14.22□□□□□ -0.13
NUMB-212ENST00000554546 ZNF500O60304 480 aaPredicted RBP14.22□□□□□ -0.13
NUMB-212ENST00000554546 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
NUMB-212ENST00000554546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
NUMB-212ENST00000554546 CHMP5Q9NZZ3 219 aa14.21□□□□□ -0.13
NUMB-212ENST00000554546 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
NUMB-212ENST00000554546 CDCA7LQ96GN5 454 aa14.2□□□□□ -0.14
NUMB-212ENST00000554546 NOL7Q9UMY1 257 aaKnown RBP14.2□□□□□ -0.14
NUMB-212ENST00000554546 TRIM6-TRIM34B2RNG4 842 aa14.2□□□□□ -0.14
NUMB-212ENST00000554546 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
NUMB-212ENST00000554546 TRIM34Q9BYJ4 488 aa14.2□□□□□ -0.14
NUMB-212ENST00000554546 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
NUMB-212ENST00000554546 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
NUMB-212ENST00000554546 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
NUMB-212ENST00000554546 PATL2C9JE40 543 aaKnown RBP14.17□□□□□ -0.14
NUMB-212ENST00000554546 CLGNO14967 610 aa14.17□□□□□ -0.14
NUMB-212ENST00000554546 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
NUMB-212ENST00000554546 HOMEZQ8IX15 550 aa14.17□□□□□ -0.14
NUMB-212ENST00000554546 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.17□□□□□ -0.14
NUMB-212ENST00000554546 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
NUMB-212ENST00000554546 SOX12O15370 315 aa14.16□□□□□ -0.14
NUMB-212ENST00000554546 NBPF1Q3BBV0 1214 aa14.16□□□□□ -0.14
NUMB-212ENST00000554546 UPF2Q9HAU5 1272 aaKnown RBP14.15□□□□□ -0.14
NUMB-212ENST00000554546 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
NUMB-212ENST00000554546 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
NUMB-212ENST00000554546 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.14
NUMB-212ENST00000554546 MMP14P50281 582 aa14.15□□□□□ -0.14
NUMB-212ENST00000554546 FAM193AP78312 1265 aa14.15□□□□□ -0.14
NUMB-212ENST00000554546 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.15
NUMB-212ENST00000554546 MROH2BQ7Z745 1585 aa14.14□□□□□ -0.15
NUMB-212ENST00000554546 PSEN1P49768 467 aa14.14□□□□□ -0.15
NUMB-212ENST00000554546 MYRIPQ8NFW9 859 aa14.14□□□□□ -0.15
NUMB-212ENST00000554546 ZKSCAN5Q9Y2L8 839 aa14.13□□□□□ -0.15
NUMB-212ENST00000554546 HS1BP3Q53T59 392 aa14.13□□□□□ -0.15
NUMB-212ENST00000554546 WIZO95785 1651 aa14.13□□□□□ -0.15
NUMB-212ENST00000554546 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
NUMB-212ENST00000554546 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.154e-7■□□□□ 9.6
NUMB-212ENST00000554546 PDCL2Q8N4E4 241 aa14.11□□□□□ -0.15
NUMB-212ENST00000554546 TRERF1Q96PN7 1200 aa14.11□□□□□ -0.15
NUMB-212ENST00000554546 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
NUMB-212ENST00000554546 CAPN2P17655 700 aa14.11□□□□□ -0.15
NUMB-212ENST00000554546 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
NUMB-212ENST00000554546 CCDC66A2RUB6 948 aa14.1□□□□□ -0.15
NUMB-212ENST00000554546 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
NUMB-212ENST00000554546 PDE3BQ13370 1112 aa14.1□□□□□ -0.15
NUMB-212ENST00000554546 MLECQ14165 292 aa14.1□□□□□ -0.15
NUMB-212ENST00000554546 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
NUMB-212ENST00000554546 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
NUMB-212ENST00000554546 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.15
NUMB-212ENST00000554546 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.15
NUMB-212ENST00000554546 SKOR2Q2VWA4 1001 aaPredicted RBP14.08□□□□□ -0.15
NUMB-212ENST00000554546 TBC1D32Q96NH3 1257 aa14.08□□□□□ -0.16
NUMB-212ENST00000554546 EP400NLQ6ZTU2 488 aa14.07□□□□□ -0.16
NUMB-212ENST00000554546 C14orf37Q86TY3 774 aa14.07□□□□□ -0.16
NUMB-212ENST00000554546 TNPO1Q92973 898 aaKnown RBP14.07□□□□□ -0.16
NUMB-212ENST00000554546 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
NUMB-212ENST00000554546 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
NUMB-212ENST00000554546 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
NUMB-212ENST00000554546 TNNT3P45378 269 aaPredicted RBP14.06□□□□□ -0.16
NUMB-212ENST00000554546 PTMSP20962 102 aa14.05□□□□□ -0.16
NUMB-212ENST00000554546 RALBP1Q15311 655 aa14.05□□□□□ -0.16
NUMB-212ENST00000554546 CC2D1BQ5T0F9 858 aaKnown RBP14.05□□□□□ -0.16
NUMB-212ENST00000554546 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUMB-212ENST00000554546 BCL2L12Q9HB09 334 aa14.05□□□□□ -0.16
NUMB-212ENST00000554546 HSP90B1P14625 803 aaKnown RBP14.04□□□□□ -0.16
NUMB-212ENST00000554546 MCM5P33992 734 aa14.04□□□□□ -0.16
NUMB-212ENST00000554546 GEMIN8Q9NWZ8 242 aaKnown RBP14.04□□□□□ -0.16
NUMB-212ENST00000554546 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
NUMB-212ENST00000554546 ERICH4A6NGS2 130 aa14.04□□□□□ -0.16
NUMB-212ENST00000554546 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
NUMB-212ENST00000554546 HMGN5P82970 282 aaKnown RBP14.03□□□□□ -0.16
NUMB-212ENST00000554546 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms