RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PTGER2P43116 358 aa10.17□□□□□ -0.78
VPS33B-203ENST00000554264 DDX12PQ92771 950 aa10.17□□□□□ -0.78
VPS33B-203ENST00000554264 ERBB3P21860 1342 aa10.16□□□□□ -0.78
VPS33B-203ENST00000554264 PRIM1P49642 420 aaKnown RBP10.15□□□□□ -0.78
VPS33B-203ENST00000554264 VARS2Q5ST30 1063 aaKnown RBP10.15□□□□□ -0.78
VPS33B-203ENST00000554264 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
VPS33B-203ENST00000554264 TESPA1A2RU30 521 aaPredicted RBP10.14□□□□□ -0.79
VPS33B-203ENST00000554264 FOSBP53539 338 aa10.14□□□□□ -0.79
VPS33B-203ENST00000554264 HS3ST6Q96QI5 342 aa10.14□□□□□ -0.79
VPS33B-203ENST00000554264 CFTRP13569 1480 aa10.13□□□□□ -0.79
VPS33B-203ENST00000554264 GRXCR2A6NFK2 248 aa10.13□□□□□ -0.79
VPS33B-203ENST00000554264 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
VPS33B-203ENST00000554264 WIZO95785 1651 aa10.12□□□□□ -0.79
VPS33B-203ENST00000554264 POTEMA6NI47 508 aa10.12□□□□□ -0.79
VPS33B-203ENST00000554264 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
VPS33B-203ENST00000554264 POTEEQ6S8J3 1075 aa10.11□□□□□ -0.79
VPS33B-203ENST00000554264 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
VPS33B-203ENST00000554264 PHF14O94880 888 aa10.1□□□□□ -0.79
VPS33B-203ENST00000554264 OSBPP22059 807 aa10.1□□□□□ -0.79
VPS33B-203ENST00000554264 URB2Q14146 1524 aaKnown RBP10.08□□□□□ -0.8
VPS33B-203ENST00000554264 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
VPS33B-203ENST00000554264 NBR1Q14596 966 aa10.07□□□□□ -0.8
VPS33B-203ENST00000554264 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
VPS33B-203ENST00000554264 ZNF687Q8N1G0 1237 aa10.06□□□□□ -0.8
VPS33B-203ENST00000554264 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
VPS33B-203ENST00000554264 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
VPS33B-203ENST00000554264 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
VPS33B-203ENST00000554264 RBM33Q96EV2 1170 aaKnown RBP10.05□□□□□ -0.8
VPS33B-203ENST00000554264 EPAS1Q99814 870 aa10.05□□□□□ -0.8
VPS33B-203ENST00000554264 RIMBP3CA6NJZ7 1639 aa10.04□□□□□ -0.8
VPS33B-203ENST00000554264 RIMBP3BA6NNM3 1639 aa10.04□□□□□ -0.8
VPS33B-203ENST00000554264 RIMBP3Q9UFD9 1639 aa10.04□□□□□ -0.8
VPS33B-203ENST00000554264 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
VPS33B-203ENST00000554264 EN1Q05925 392 aaPredicted RBP10.03□□□□□ -0.8
VPS33B-203ENST00000554264 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
VPS33B-203ENST00000554264 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
VPS33B-203ENST00000554264 TOP2AP11388 1531 aaKnown RBP10.02□□□□□ -0.8
VPS33B-203ENST00000554264 BCL2L12Q9HB09 334 aa10.02□□□□□ -0.81
VPS33B-203ENST00000554264 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
VPS33B-203ENST00000554264 ARHGEF11O15085 1522 aa10.02□□□□□ -0.81
VPS33B-203ENST00000554264 RSF1Q96T23 1441 aaPredicted RBP10.01□□□□□ -0.81
VPS33B-203ENST00000554264 PSEN2P49810 448 aa10.01□□□□□ -0.81
VPS33B-203ENST00000554264 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
VPS33B-203ENST00000554264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS33B-203ENST00000554264 FBXW7Q969H0 707 aa10.01□□□□□ -0.81
VPS33B-203ENST00000554264 BCANQ96GW7 911 aa10.01□□□□□ -0.81
VPS33B-203ENST00000554264 CDAN1Q8IWY9 1227 aa10□□□□□ -0.81
VPS33B-203ENST00000554264 CDHR5Q9HBB8 845 aa10□□□□□ -0.81
VPS33B-203ENST00000554264 COL9A1P20849 921 aa9.99□□□□□ -0.81
VPS33B-203ENST00000554264 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
VPS33B-203ENST00000554264 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
VPS33B-203ENST00000554264 ZNF608Q9ULD9 1512 aaPredicted RBP9.98□□□□□ -0.81
VPS33B-203ENST00000554264 MAP3K7O43318 606 aa9.98□□□□□ -0.81
VPS33B-203ENST00000554264 DMRTA1Q5VZB9 504 aa9.98□□□□□ -0.81
VPS33B-203ENST00000554264 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
VPS33B-203ENST00000554264 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
VPS33B-203ENST00000554264 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
VPS33B-203ENST00000554264 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
VPS33B-203ENST00000554264 CYB5RLQ6IPT4 315 aa9.96□□□□□ -0.82
VPS33B-203ENST00000554264 PTPREP23469 700 aa9.95□□□□□ -0.82
VPS33B-203ENST00000554264 ABCC8Q09428 1581 aa9.95□□□□□ -0.82
VPS33B-203ENST00000554264 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
VPS33B-203ENST00000554264 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
VPS33B-203ENST00000554264 GPR37O15354 613 aa9.93□□□□□ -0.82
VPS33B-203ENST00000554264 PBX2P40425 430 aa9.93□□□□□ -0.82
VPS33B-203ENST00000554264 LMOD2Q6P5Q4 547 aa9.93□□□□□ -0.82
VPS33B-203ENST00000554264 NUTM2FA1L443 756 aa9.92□□□□□ -0.82
VPS33B-203ENST00000554264 EIF4G3O43432 1585 aaKnown RBP9.92□□□□□ -0.82
VPS33B-203ENST00000554264 PTGDRQ13258 359 aa9.91□□□□□ -0.82
VPS33B-203ENST00000554264 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.82
VPS33B-203ENST00000554264 LSM11P83369 360 aaKnown RBP eCLIP9.9□□□□□ -0.82
VPS33B-203ENST00000554264 ZBED2Q9BTP6 218 aa9.9□□□□□ -0.82
VPS33B-203ENST00000554264 CCDC88BA6NC98 1476 aa9.9□□□□□ -0.83
VPS33B-203ENST00000554264 ARAP1Q96P48 1450 aa9.9□□□□□ -0.83
VPS33B-203ENST00000554264 DNMBPQ6XZF7 1577 aa9.89□□□□□ -0.83
VPS33B-203ENST00000554264 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
VPS33B-203ENST00000554264 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
VPS33B-203ENST00000554264 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.834e-6■■□□□ 13.6
VPS33B-203ENST00000554264 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
VPS33B-203ENST00000554264 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
VPS33B-203ENST00000554264 FECHP22830 423 aa9.87□□□□□ -0.83
VPS33B-203ENST00000554264 GPIHBP1Q8IV16 184 aa9.87□□□□□ -0.83
VPS33B-203ENST00000554264 VPS9D1Q9Y2B5 631 aa9.87□□□□□ -0.83
VPS33B-203ENST00000554264 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
VPS33B-203ENST00000554264 CHD1O14646 1710 aa9.86□□□□□ -0.83
VPS33B-203ENST00000554264 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
VPS33B-203ENST00000554264 PRSS12P56730 875 aa9.85□□□□□ -0.83
VPS33B-203ENST00000554264 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
VPS33B-203ENST00000554264 SLC4A5Q9BY07 1137 aa9.85□□□□□ -0.83
VPS33B-203ENST00000554264 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
VPS33B-203ENST00000554264 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
VPS33B-203ENST00000554264 FCHSD2O94868 740 aa9.84□□□□□ -0.83
VPS33B-203ENST00000554264 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
VPS33B-203ENST00000554264 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
VPS33B-203ENST00000554264 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
VPS33B-203ENST00000554264 KCNH8Q96L42 1107 aa9.84□□□□□ -0.83
VPS33B-203ENST00000554264 CERKQ8TCT0 537 aa9.83□□□□□ -0.84
VPS33B-203ENST00000554264 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
VPS33B-203ENST00000554264 TRIM6-TRIM34B2RNG4 842 aa9.82□□□□□ -0.84
VPS33B-203ENST00000554264 TK2O00142 265 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms