RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 STK25O00506 426 aa7.66□□□□□ -1.18
KTN1-211ENST00000553710 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
KTN1-211ENST00000553710 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
KTN1-211ENST00000553710 PPP1R18Q6NYC8 613 aa7.65□□□□□ -1.18
KTN1-211ENST00000553710 ANO8Q9HCE9 1232 aaPredicted RBP7.64□□□□□ -1.19
KTN1-211ENST00000553710 MYT1Q01538 1121 aa7.63□□□□□ -1.19
KTN1-211ENST00000553710 HPS5Q9UPZ3 1129 aa7.63□□□□□ -1.19
KTN1-211ENST00000553710 TJAP1Q5JTD0 557 aa7.62□□□□□ -1.19
KTN1-211ENST00000553710 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
KTN1-211ENST00000553710 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.6□□□□□ -1.19
KTN1-211ENST00000553710 KIAA1468Q9P260 1216 aa7.6□□□□□ -1.19
KTN1-211ENST00000553710 COL9A1P20849 921 aa7.59□□□□□ -1.19
KTN1-211ENST00000553710 DGAT1O75907 488 aa7.58□□□□□ -1.2
KTN1-211ENST00000553710 PKDCCQ504Y2 493 aa7.58□□□□□ -1.2
KTN1-211ENST00000553710 LRCH3Q96II8 777 aa7.58□□□□□ -1.2
KTN1-211ENST00000553710 ONECUT3O60422 494 aaPredicted RBP7.57□□□□□ -1.2
KTN1-211ENST00000553710 SEPT9Q9UHD8 586 aaPredicted RBP7.57□□□□□ -1.2
KTN1-211ENST00000553710 FAM98CQ17RN3 349 aaKnown RBP7.56□□□□□ -1.2
KTN1-211ENST00000553710 TRIM67Q6ZTA4 783 aa7.56□□□□□ -1.2
KTN1-211ENST00000553710 EVI5O60447 810 aa7.55□□□□□ -1.2
KTN1-211ENST00000553710 WFS1O76024 890 aa7.55□□□□□ -1.2
KTN1-211ENST00000553710 INSM1Q01101 510 aaPredicted RBP7.55□□□□□ -1.2
KTN1-211ENST00000553710 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
KTN1-211ENST00000553710 WIPF1O43516 503 aa7.53□□□□□ -1.2
KTN1-211ENST00000553710 MTRQ99707 1265 aa7.53□□□□□ -1.2
KTN1-211ENST00000553710 PPP4CP60510 307 aa7.52□□□□□ -1.21
KTN1-211ENST00000553710 PCDHGA10Q9Y5H3 936 aa7.5□□□□□ -1.21
KTN1-211ENST00000553710 ZNF516Q92618 1163 aa7.49□□□□□ -1.21
KTN1-211ENST00000553710 GGCXP38435 758 aa7.48□□□□□ -1.21
KTN1-211ENST00000553710 PPP1R15BQ5SWA1 713 aa7.47□□□□□ -1.21
KTN1-211ENST00000553710 TRIM6-TRIM34B2RNG4 842 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 PRR20EP86478 221 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 PRR20CP86479 221 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 PRR20DP86480 221 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 PRR20BP86481 221 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 PRR20AP86496 221 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
KTN1-211ENST00000553710 SUZ12Q15022 739 aaKnown RBP7.46□□□□□ -1.22
KTN1-211ENST00000553710 FBXW7Q969H0 707 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
KTN1-211ENST00000553710 NKX2-3Q8TAU0 364 aa7.45□□□□□ -1.22
KTN1-211ENST00000553710 AAASQ9NRG9 546 aa7.45□□□□□ -1.22
KTN1-211ENST00000553710 ST8SIA5O15466 376 aa7.44□□□□□ -1.22
KTN1-211ENST00000553710 TYW1BQ6NUM6 668 aa7.44□□□□□ -1.22
KTN1-211ENST00000553710 FAM187AA6NFU0 413 aa7.43□□□□□ -1.22
KTN1-211ENST00000553710 CRISPLD2Q9H0B8 497 aa7.43□□□□□ -1.22
KTN1-211ENST00000553710 SLC19A1P41440 591 aa7.42□□□□□ -1.22
KTN1-211ENST00000553710 PHF14O94880 888 aa7.4□□□□□ -1.22
KTN1-211ENST00000553710 C6orf132Q5T0Z8 1188 aa7.4□□□□□ -1.22
KTN1-211ENST00000553710 MAP3K9P80192 1104 aa7.39□□□□□ -1.23
KTN1-211ENST00000553710 SPRYD7Q5W111 196 aa7.39□□□□□ -1.23
KTN1-211ENST00000553710 ZNF598Q86UK7 904 aaKnown RBP7.39□□□□□ -1.23
KTN1-211ENST00000553710 EMID1Q96A84 441 aaPredicted RBP7.39□□□□□ -1.23
KTN1-211ENST00000553710 SAMD7Q7Z3H4 446 aa7.38□□□□□ -1.23
KTN1-211ENST00000553710 FAM181BA6NEQ2 426 aa7.36□□□□□ -1.23
KTN1-211ENST00000553710 C11orf95C9JLR9 678 aaPredicted RBP7.35□□□□□ -1.23
KTN1-211ENST00000553710 GDF9O60383 454 aa7.35□□□□□ -1.23
KTN1-211ENST00000553710 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
KTN1-211ENST00000553710 PACS2Q86VP3 889 aa7.35□□□□□ -1.23
KTN1-211ENST00000553710 TNFRSF10AO00220 468 aa7.34□□□□□ -1.23
KTN1-211ENST00000553710 APLP1P51693 650 aa7.34□□□□□ -1.23
KTN1-211ENST00000553710 CRIPAKQ8N1N5 446 aa7.34□□□□□ -1.23
KTN1-211ENST00000553710 RNF223E7ERA6 249 aa7.33□□□□□ -1.24
KTN1-211ENST00000553710 ZNF697Q5TEC3 545 aa7.33□□□□□ -1.24
KTN1-211ENST00000553710 DACH1Q9UI36 760 aa7.33□□□□□ -1.24
KTN1-211ENST00000553710 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
KTN1-211ENST00000553710 TSKSQ9UJT2 592 aa7.32□□□□□ -1.24
KTN1-211ENST00000553710 ECM2O94769 699 aaPredicted RBP7.31□□□□□ -1.24
KTN1-211ENST00000553710 PDE4AP27815 886 aa7.31□□□□□ -1.24
KTN1-211ENST00000553710 EPAS1Q99814 870 aa7.31□□□□□ -1.24
KTN1-211ENST00000553710 NCKAP5LQ9HCH0 1330 aa7.3□□□□□ -1.24
KTN1-211ENST00000553710 COPS2P61201 443 aa7.3□□□□□ -1.24
KTN1-211ENST00000553710 RGL2O15211 777 aa7.29□□□□□ -1.24
KTN1-211ENST00000553710 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
KTN1-211ENST00000553710 ZPR1O75312 459 aa7.28□□□□□ -1.24
KTN1-211ENST00000553710 SMAPO00193 183 aa7.27□□□□□ -1.25
KTN1-211ENST00000553710 LIAT1Q6ZQX7 453 aa7.27□□□□□ -1.25
KTN1-211ENST00000553710 EMILIN3Q9NT22 766 aa7.27□□□□□ -1.25
KTN1-211ENST00000553710 ANKLE1Q8NAG6 615 aa7.26□□□□□ -1.25
KTN1-211ENST00000553710 AVPP01185 164 aa7.25□□□□□ -1.25
KTN1-211ENST00000553710 AXIN1O15169 862 aa7.24□□□□□ -1.25
KTN1-211ENST00000553710 RNF40O75150 1001 aa7.24□□□□□ -1.25
KTN1-211ENST00000553710 RBM33Q96EV2 1170 aaKnown RBP7.24□□□□□ -1.25
KTN1-211ENST00000553710 NECTIN2Q92692 538 aa7.23□□□□□ -1.25
KTN1-211ENST00000553710 DDX27Q96GQ7 796 aaKnown RBP7.23□□□□□ -1.25
KTN1-211ENST00000553710 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
KTN1-211ENST00000553710 ZSCAN1Q8NBB4 408 aa7.22□□□□□ -1.25
KTN1-211ENST00000553710 HDGFP51858 240 aaKnown RBP7.21□□□□□ -1.26
KTN1-211ENST00000553710 CTC1Q2NKJ3 1217 aa7.21□□□□□ -1.26
KTN1-211ENST00000553710 LMOD2Q6P5Q4 547 aa7.21□□□□□ -1.26
KTN1-211ENST00000553710 LARP6Q9BRS8 491 aaKnown RBP7.21□□□□□ -1.26
KTN1-211ENST00000553710 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
KTN1-211ENST00000553710 C3orf80F5H4A9 247 aa7.19□□□□□ -1.26
KTN1-211ENST00000553710 PPEF1O14829 653 aaPredicted RBP7.19□□□□□ -1.26
KTN1-211ENST00000553710 TATDN2Q93075 761 aa7.19□□□□□ -1.26
KTN1-211ENST00000553710 CDCA7LQ96GN5 454 aa7.19□□□□□ -1.26
KTN1-211ENST00000553710 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
KTN1-211ENST00000553710 MFSD10Q14728 455 aa7.18□□□□□ -1.26
KTN1-211ENST00000553710 FAM198AQ9UFP1 575 aa7.18□□□□□ -1.26
KTN1-211ENST00000553710 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms