RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MYO5CQ9NQX4 1742 aa9.45□□□□□ -0.9
LINC-ROR-201ENST00000553704 UNC13BO14795 1591 aa9.44□□□□□ -0.9
LINC-ROR-201ENST00000553704 ST20-MTHFSA0A0A6YYL1 179 aa9.44□□□□□ -0.9
LINC-ROR-201ENST00000553704 FANCIQ9NVI1 1328 aa9.44□□□□□ -0.9
LINC-ROR-201ENST00000553704 DCAF11Q8TEB1 546 aa9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 TSPY4P0CV99 314 aa9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 TSPY10P0CW01 314 aa9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 NUDCQ9Y266 331 aa9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 ROCK2O75116 1388 aaKnown RBP9.43□□□□□ -0.9
LINC-ROR-201ENST00000553704 PRAG1Q86YV5 1406 aa9.42□□□□□ -0.9
LINC-ROR-201ENST00000553704 PLA2R1Q13018 1463 aa9.42□□□□□ -0.9
LINC-ROR-201ENST00000553704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC-ROR-201ENST00000553704 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
LINC-ROR-201ENST00000553704 MAST1Q9Y2H9 1570 aa9.42□□□□□ -0.9
LINC-ROR-201ENST00000553704 ARHGAP5Q13017 1502 aa9.41□□□□□ -0.9
LINC-ROR-201ENST00000553704 A2MP01023 1474 aa9.41□□□□□ -0.9
LINC-ROR-201ENST00000553704 LRPPRCP42704 1394 aaKnown RBP9.41□□□□□ -0.9
LINC-ROR-201ENST00000553704 RNF123Q5XPI4 1314 aa9.41□□□□□ -0.9
LINC-ROR-201ENST00000553704 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
LINC-ROR-201ENST00000553704 IQGAP3Q86VI3 1631 aa9.41□□□□□ -0.9
LINC-ROR-201ENST00000553704 SHROOM2Q13796 1616 aa9.4□□□□□ -0.9
LINC-ROR-201ENST00000553704 PLXNC1O60486 1568 aa9.4□□□□□ -0.91
LINC-ROR-201ENST00000553704 CCDC144AA2RUR9 1427 aa9.4□□□□□ -0.91
LINC-ROR-201ENST00000553704 TMC1Q8TDI8 760 aa9.39□□□□□ -0.91
LINC-ROR-201ENST00000553704 PRDM15P57071 1507 aaPredicted RBP9.39□□□□□ -0.91
LINC-ROR-201ENST00000553704 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
LINC-ROR-201ENST00000553704 NBPF1Q3BBV0 1214 aa9.38□□□□□ -0.91
LINC-ROR-201ENST00000553704 LAMC1P11047 1609 aa9.38□□□□□ -0.91
LINC-ROR-201ENST00000553704 PLEKHH2Q8IVE3 1493 aa9.38□□□□□ -0.91
LINC-ROR-201ENST00000553704 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
LINC-ROR-201ENST00000553704 BRD4O60885 1362 aaPredicted RBP9.38□□□□□ -0.91
LINC-ROR-201ENST00000553704 RNF17Q9BXT8 1623 aaKnown RBP9.37□□□□□ -0.91
LINC-ROR-201ENST00000553704 RGL3Q3MIN7 710 aa9.37□□□□□ -0.91
LINC-ROR-201ENST00000553704 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
LINC-ROR-201ENST00000553704 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
LINC-ROR-201ENST00000553704 MAGI2Q86UL8 1455 aa9.36□□□□□ -0.91
LINC-ROR-201ENST00000553704 ABCC2Q92887 1545 aa9.36□□□□□ -0.91
LINC-ROR-201ENST00000553704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC-ROR-201ENST00000553704 GPRASP1Q5JY77 1395 aa9.36□□□□□ -0.91
LINC-ROR-201ENST00000553704 POTEDQ86YR6 584 aa9.35□□□□□ -0.91
LINC-ROR-201ENST00000553704 EIF2AK4Q9P2K8 1649 aaKnown RBP9.35□□□□□ -0.91
LINC-ROR-201ENST00000553704 KTN1Q86UP2 1357 aaKnown RBP9.34□□□□□ -0.91
LINC-ROR-201ENST00000553704 ZCCHC11Q5TAX3 1644 aaKnown RBP9.34□□□□□ -0.91
LINC-ROR-201ENST00000553704 RALBP1Q15311 655 aa9.34□□□□□ -0.91
LINC-ROR-201ENST00000553704 DUOX2Q9NRD8 1548 aa9.34□□□□□ -0.91
LINC-ROR-201ENST00000553704 CCDC136Q96JN2 1154 aa9.34□□□□□ -0.91
LINC-ROR-201ENST00000553704 SALL2Q9Y467 1007 aaPredicted RBP9.34□□□□□ -0.91
LINC-ROR-201ENST00000553704 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
LINC-ROR-201ENST00000553704 TESK2Q96S53 571 aa9.33□□□□□ -0.92
LINC-ROR-201ENST00000553704 ABCC1P33527 1531 aa9.33□□□□□ -0.92
LINC-ROR-201ENST00000553704 ERBINQ96RT1 1412 aa9.32□□□□□ -0.92
LINC-ROR-201ENST00000553704 MADDQ8WXG6 1647 aa9.32□□□□□ -0.92
LINC-ROR-201ENST00000553704 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
LINC-ROR-201ENST00000553704 IQGAP1P46940 1657 aa9.32□□□□□ -0.92
LINC-ROR-201ENST00000553704 NLRP13Q86W25 1043 aa9.32□□□□□ -0.92
LINC-ROR-201ENST00000553704 ATP10AO60312 1499 aa9.31□□□□□ -0.92
LINC-ROR-201ENST00000553704 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
LINC-ROR-201ENST00000553704 RSPH4AQ5TD94 716 aa9.31□□□□□ -0.92
LINC-ROR-201ENST00000553704 CC2D1BQ5T0F9 858 aaKnown RBP9.31□□□□□ -0.92
LINC-ROR-201ENST00000553704 SPHKAPQ2M3C7 1700 aa9.3□□□□□ -0.92
LINC-ROR-201ENST00000553704 BLMP54132 1417 aaPredicted RBP9.3□□□□□ -0.92
LINC-ROR-201ENST00000553704 TRAPPC8Q9Y2L5 1435 aa9.3□□□□□ -0.92
LINC-ROR-201ENST00000553704 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
LINC-ROR-201ENST00000553704 EXOC6Q8TAG9 804 aa9.3□□□□□ -0.92
LINC-ROR-201ENST00000553704 CDCA7LQ96GN5 454 aa9.3□□□□□ -0.92
LINC-ROR-201ENST00000553704 CEP152O94986 1710 aa9.29□□□□□ -0.92
LINC-ROR-201ENST00000553704 CLTCL1P53675 1640 aa9.29□□□□□ -0.92
LINC-ROR-201ENST00000553704 MYOM1P52179 1685 aa9.28□□□□□ -0.92
LINC-ROR-201ENST00000553704 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
LINC-ROR-201ENST00000553704 PLCH2O75038 1416 aa9.28□□□□□ -0.92
LINC-ROR-201ENST00000553704 BCL11AQ9H165 835 aa9.28□□□□□ -0.92
LINC-ROR-201ENST00000553704 PANK3Q9H999 370 aa9.28□□□□□ -0.92
LINC-ROR-201ENST00000553704 RCAN3Q9UKA8 241 aa9.28□□□□□ -0.92
LINC-ROR-201ENST00000553704 WDR7Q9Y4E6 1490 aa9.27□□□□□ -0.92
LINC-ROR-201ENST00000553704 TRPM2O94759 1503 aa9.27□□□□□ -0.93
LINC-ROR-201ENST00000553704 DEPDC5O75140 1603 aa9.27□□□□□ -0.93
LINC-ROR-201ENST00000553704 NOP58Q9Y2X3 529 aaKnown RBP9.27□□□□□ -0.93
LINC-ROR-201ENST00000553704 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
LINC-ROR-201ENST00000553704 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
LINC-ROR-201ENST00000553704 DAXXQ9UER7 740 aaPredicted RBP9.26□□□□□ -0.93
LINC-ROR-201ENST00000553704 SYNMO15061 1565 aa9.25□□□□□ -0.93
LINC-ROR-201ENST00000553704 PLIN1O60240 522 aa9.24□□□□□ -0.93
LINC-ROR-201ENST00000553704 TMF1P82094 1093 aa9.24□□□□□ -0.93
LINC-ROR-201ENST00000553704 TET3O43151 1660 aa9.24□□□□□ -0.93
LINC-ROR-201ENST00000553704 INO80Q9ULG1 1556 aaPredicted RBP9.24□□□□□ -0.93
LINC-ROR-201ENST00000553704 UHRF1BP1LA0JNW5 1464 aa9.23□□□□□ -0.93
LINC-ROR-201ENST00000553704 UGGT1Q9NYU2 1555 aa9.23□□□□□ -0.93
LINC-ROR-201ENST00000553704 WASHC2CQ9Y4E1 1318 aa9.23□□□□□ -0.93
LINC-ROR-201ENST00000553704 PDE3BQ13370 1112 aa9.23□□□□□ -0.93
LINC-ROR-201ENST00000553704 SKAP1Q86WV1 359 aa9.23□□□□□ -0.93
LINC-ROR-201ENST00000553704 EFCAB2Q5VUJ9 269 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 AFAP1Q8N556 730 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 MROH1Q8NDA8 1641 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 INSRP06213 1382 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 PLEKHH1Q9ULM0 1364 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 PTPRTO14522 1441 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 VWDEQ8N2E2 1590 aa9.22□□□□□ -0.93
LINC-ROR-201ENST00000553704 ABCA9Q8IUA7 1624 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms