RNA–Protein interactions for RNA: ENST00000552997.1

USP15-219, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 4

Gene USP15, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-219ENST00000552997 SPDYE16A6NNV3 312 aaPredicted RBP9.49□□□□□ -0.89
USP15-219ENST00000552997 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
USP15-219ENST00000552997 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
USP15-219ENST00000552997 COL9A1P20849 921 aa9.48□□□□□ -0.89
USP15-219ENST00000552997 E2F4Q16254 413 aa9.48□□□□□ -0.89
USP15-219ENST00000552997 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.9
USP15-219ENST00000552997 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.9
USP15-219ENST00000552997 C6orf132Q5T0Z8 1188 aa9.45□□□□□ -0.9
USP15-219ENST00000552997 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
USP15-219ENST00000552997 EN1Q05925 392 aaPredicted RBP9.44□□□□□ -0.9
USP15-219ENST00000552997 THSD4Q6ZMP0 1018 aa9.44□□□□□ -0.9
USP15-219ENST00000552997 DDX12PQ92771 950 aa9.44□□□□□ -0.9
USP15-219ENST00000552997 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
USP15-219ENST00000552997 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
USP15-219ENST00000552997 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
USP15-219ENST00000552997 NBR1Q14596 966 aa9.41□□□□□ -0.9
USP15-219ENST00000552997 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
USP15-219ENST00000552997 WNT2BQ93097 391 aa9.41□□□□□ -0.9
USP15-219ENST00000552997 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
USP15-219ENST00000552997 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
USP15-219ENST00000552997 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
USP15-219ENST00000552997 MAP3K7O43318 606 aa9.37□□□□□ -0.91
USP15-219ENST00000552997 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
USP15-219ENST00000552997 PTPN5P54829 565 aa9.36□□□□□ -0.91
USP15-219ENST00000552997 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
USP15-219ENST00000552997 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
USP15-219ENST00000552997 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
USP15-219ENST00000552997 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
USP15-219ENST00000552997 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
USP15-219ENST00000552997 CERKQ8TCT0 537 aa9.33□□□□□ -0.92
USP15-219ENST00000552997 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
USP15-219ENST00000552997 TSHZ2Q9NRE2 1034 aa9.33□□□□□ -0.92
USP15-219ENST00000552997 SOWAHBA6NEL2 793 aa9.32□□□□□ -0.92
USP15-219ENST00000552997 OSBPP22059 807 aa9.31□□□□□ -0.92
USP15-219ENST00000552997 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
USP15-219ENST00000552997 TSKSQ9UJT2 592 aa9.31□□□□□ -0.92
USP15-219ENST00000552997 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
USP15-219ENST00000552997 NYAP1Q6ZVC0 841 aa9.3□□□□□ -0.92
USP15-219ENST00000552997 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
USP15-219ENST00000552997 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
USP15-219ENST00000552997 BCAMP50895 628 aa9.29□□□□□ -0.92
USP15-219ENST00000552997 PRSS12P56730 875 aa9.29□□□□□ -0.92
USP15-219ENST00000552997 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
USP15-219ENST00000552997 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
USP15-219ENST00000552997 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
USP15-219ENST00000552997 ITGBL1O95965 494 aaPredicted RBP9.27□□□□□ -0.93
USP15-219ENST00000552997 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
USP15-219ENST00000552997 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
USP15-219ENST00000552997 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
USP15-219ENST00000552997 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
USP15-219ENST00000552997 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
USP15-219ENST00000552997 A0A0G2JS52 829 aa9.23□□□□□ -0.93
USP15-219ENST00000552997 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
USP15-219ENST00000552997 WBP1LQ9NX94 342 aa9.23□□□□□ -0.93
USP15-219ENST00000552997 RGS20O76081 388 aa9.22□□□□□ -0.93
USP15-219ENST00000552997 P3H3Q8IVL6 736 aa9.22□□□□□ -0.93
USP15-219ENST00000552997 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
USP15-219ENST00000552997 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
USP15-219ENST00000552997 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
USP15-219ENST00000552997 TATDN2Q93075 761 aa9.2□□□□□ -0.94
USP15-219ENST00000552997 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
USP15-219ENST00000552997 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
USP15-219ENST00000552997 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
USP15-219ENST00000552997 SMAPO00193 183 aa9.18□□□□□ -0.94
USP15-219ENST00000552997 PNMA3Q9UL41 463 aa9.18□□□□□ -0.94
USP15-219ENST00000552997 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
USP15-219ENST00000552997 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
USP15-219ENST00000552997 NUDT18Q6ZVK8 323 aa9.15□□□□□ -0.94
USP15-219ENST00000552997 PTGDRQ13258 359 aa9.13□□□□□ -0.95
USP15-219ENST00000552997 PPP4CP60510 307 aa9.12□□□□□ -0.95
USP15-219ENST00000552997 KCNC4Q03721 635 aa9.12□□□□□ -0.95
USP15-219ENST00000552997 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
USP15-219ENST00000552997 EYA1Q99502 592 aa9.1□□□□□ -0.95
USP15-219ENST00000552997 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
USP15-219ENST00000552997 SEMA3EO15041 775 aa9.07□□□□□ -0.96
USP15-219ENST00000552997 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
USP15-219ENST00000552997 SWT1Q5T5J6 900 aaKnown RBP9.07□□□□□ -0.96
USP15-219ENST00000552997 SLF2Q8IX21 1173 aa9.07□□□□□ -0.96
USP15-219ENST00000552997 TESPA1A2RU30 521 aaPredicted RBP9.05□□□□□ -0.96
USP15-219ENST00000552997 ADGRG1Q9Y653 693 aa9.05□□□□□ -0.96
USP15-219ENST00000552997 RNF40O75150 1001 aa9.04□□□□□ -0.96
USP15-219ENST00000552997 FCHSD2O94868 740 aa9.04□□□□□ -0.96
USP15-219ENST00000552997 APLP1P51693 650 aa9.04□□□□□ -0.96
USP15-219ENST00000552997 MTRQ99707 1265 aa9.04□□□□□ -0.96
USP15-219ENST00000552997 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
USP15-219ENST00000552997 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
USP15-219ENST00000552997 DNAJB2P25686 324 aa9.03□□□□□ -0.96
USP15-219ENST00000552997 SLC4A3P48751 1232 aa9.02□□□□□ -0.97
USP15-219ENST00000552997 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
USP15-219ENST00000552997 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
USP15-219ENST00000552997 PRR14Q9BWN1 585 aa9□□□□□ -0.97
USP15-219ENST00000552997 HIC1Q14526 733 aa8.99□□□□□ -0.97
USP15-219ENST00000552997 IRX2Q9BZI1 471 aaPredicted RBP8.99□□□□□ -0.97
USP15-219ENST00000552997 GPR37O15354 613 aa8.98□□□□□ -0.97
USP15-219ENST00000552997 SMYD5Q6GMV2 418 aa8.98□□□□□ -0.97
USP15-219ENST00000552997 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.97□□□□□ -0.97
USP15-219ENST00000552997 RCCD1A6NED2 376 aa8.97□□□□□ -0.97
USP15-219ENST00000552997 HAP1P54257 671 aaPredicted RBP8.96□□□□□ -0.98
USP15-219ENST00000552997 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
USP15-219ENST00000552997 PXYLP1Q8TE99 480 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms