RNA–Protein interactions for RNA: ENST00000552997.1

USP15-219, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 4

Gene USP15, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-219ENST00000552997 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
USP15-219ENST00000552997 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
USP15-219ENST00000552997 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
USP15-219ENST00000552997 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
USP15-219ENST00000552997 FOXD1Q16676 465 aa18.21■□□□□ 0.51
USP15-219ENST00000552997 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
USP15-219ENST00000552997 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
USP15-219ENST00000552997 ADRA2BP18089 450 aa17.06■□□□□ 0.32
USP15-219ENST00000552997 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
USP15-219ENST00000552997 MSH5O43196 834 aa17.03■□□□□ 0.32
USP15-219ENST00000552997 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
USP15-219ENST00000552997 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
USP15-219ENST00000552997 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
USP15-219ENST00000552997 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
USP15-219ENST00000552997 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
USP15-219ENST00000552997 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
USP15-219ENST00000552997 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
USP15-219ENST00000552997 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
USP15-219ENST00000552997 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
USP15-219ENST00000552997 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
USP15-219ENST00000552997 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
USP15-219ENST00000552997 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
USP15-219ENST00000552997 KCNA4P22459 653 aa14.54□□□□□ -0.08
USP15-219ENST00000552997 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
USP15-219ENST00000552997 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
USP15-219ENST00000552997 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
USP15-219ENST00000552997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.28□□□□□ -0.12
USP15-219ENST00000552997 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
USP15-219ENST00000552997 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
USP15-219ENST00000552997 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
USP15-219ENST00000552997 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
USP15-219ENST00000552997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
USP15-219ENST00000552997 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
USP15-219ENST00000552997 APLP2Q06481 763 aa13.71□□□□□ -0.21
USP15-219ENST00000552997 CAPN15O75808 1086 aa13.7□□□□□ -0.22
USP15-219ENST00000552997 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
USP15-219ENST00000552997 DSG3P32926 999 aa13.64□□□□□ -0.23
USP15-219ENST00000552997 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
USP15-219ENST00000552997 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
USP15-219ENST00000552997 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
USP15-219ENST00000552997 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
USP15-219ENST00000552997 ZBTB22O15209 634 aa13.4□□□□□ -0.26
USP15-219ENST00000552997 ABCB7O75027 752 aa13.39□□□□□ -0.27
USP15-219ENST00000552997 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
USP15-219ENST00000552997 POLA2Q14181 598 aa13.2□□□□□ -0.3
USP15-219ENST00000552997 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
USP15-219ENST00000552997 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
USP15-219ENST00000552997 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
USP15-219ENST00000552997 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
USP15-219ENST00000552997 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
USP15-219ENST00000552997 POTEHQ6S545 545 aa12.8□□□□□ -0.36
USP15-219ENST00000552997 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
USP15-219ENST00000552997 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
USP15-219ENST00000552997 FBLN2P98095 1184 aa12.74□□□□□ -0.37
USP15-219ENST00000552997 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
USP15-219ENST00000552997 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
USP15-219ENST00000552997 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
USP15-219ENST00000552997 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
USP15-219ENST00000552997 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
USP15-219ENST00000552997 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
USP15-219ENST00000552997 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
USP15-219ENST00000552997 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
USP15-219ENST00000552997 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
USP15-219ENST00000552997 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
USP15-219ENST00000552997 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
USP15-219ENST00000552997 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
USP15-219ENST00000552997 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP15-219ENST00000552997 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
USP15-219ENST00000552997 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
USP15-219ENST00000552997 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
USP15-219ENST00000552997 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
USP15-219ENST00000552997 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
USP15-219ENST00000552997 HAX1O00165 279 aa12.06□□□□□ -0.48
USP15-219ENST00000552997 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
USP15-219ENST00000552997 CHADLQ6NUI6 762 aa12□□□□□ -0.49
USP15-219ENST00000552997 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
USP15-219ENST00000552997 PROM2Q8N271 834 aa11.97□□□□□ -0.49
USP15-219ENST00000552997 EVX2Q03828 476 aa11.94□□□□□ -0.5
USP15-219ENST00000552997 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
USP15-219ENST00000552997 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
USP15-219ENST00000552997 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
USP15-219ENST00000552997 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
USP15-219ENST00000552997 GABBR2O75899 941 aa11.71□□□□□ -0.53
USP15-219ENST00000552997 CLCN6P51797 869 aa11.67□□□□□ -0.54
USP15-219ENST00000552997 FKBP8Q14318 412 aa11.67□□□□□ -0.54
USP15-219ENST00000552997 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
USP15-219ENST00000552997 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP15-219ENST00000552997 ZRANB1Q9UGI0 708 aa11.61□□□□□ -0.55
USP15-219ENST00000552997 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
USP15-219ENST00000552997 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
USP15-219ENST00000552997 MIER1Q8N108 512 aa11.5□□□□□ -0.57
USP15-219ENST00000552997 PHF12Q96QT6 1004 aa11.48□□□□□ -0.57
USP15-219ENST00000552997 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
USP15-219ENST00000552997 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
USP15-219ENST00000552997 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
USP15-219ENST00000552997 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
USP15-219ENST00000552997 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
USP15-219ENST00000552997 CCDC61Q9Y6R9 512 aa11.41□□□□□ -0.58
USP15-219ENST00000552997 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
USP15-219ENST00000552997 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms