RNA–Protein interactions for RNA: ENST00000552259.5

CPNE8-209, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-209ENST00000552259 ADGRD1Q6QNK2 874 aa8.58□□□□□ -1.04
CPNE8-209ENST00000552259 POTEEQ6S8J3 1075 aa8.58□□□□□ -1.04
CPNE8-209ENST00000552259 PSEN2P49810 448 aa8.57□□□□□ -1.04
CPNE8-209ENST00000552259 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
CPNE8-209ENST00000552259 CERKQ8TCT0 537 aa8.57□□□□□ -1.04
CPNE8-209ENST00000552259 STAC3Q96MF2 364 aa8.57□□□□□ -1.04
CPNE8-209ENST00000552259 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
CPNE8-209ENST00000552259 MAP3K7O43318 606 aa8.55□□□□□ -1.04
CPNE8-209ENST00000552259 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
CPNE8-209ENST00000552259 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
CPNE8-209ENST00000552259 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
CPNE8-209ENST00000552259 ONECUT3O60422 494 aaPredicted RBP8.54□□□□□ -1.04
CPNE8-209ENST00000552259 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
CPNE8-209ENST00000552259 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
CPNE8-209ENST00000552259 ZBED2Q9BTP6 218 aa8.53□□□□□ -1.04
CPNE8-209ENST00000552259 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
CPNE8-209ENST00000552259 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
CPNE8-209ENST00000552259 RNF166Q96A37 237 aaPredicted RBP8.51□□□□□ -1.05
CPNE8-209ENST00000552259 RBM33Q96EV2 1170 aaKnown RBP8.51□□□□□ -1.05
CPNE8-209ENST00000552259 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
CPNE8-209ENST00000552259 HRO43593 1189 aa8.5□□□□□ -1.05
CPNE8-209ENST00000552259 OSBPP22059 807 aa8.5□□□□□ -1.05
CPNE8-209ENST00000552259 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
CPNE8-209ENST00000552259 RBM27Q9P2N5 1060 aaKnown RBP8.49□□□□□ -1.05
CPNE8-209ENST00000552259 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
CPNE8-209ENST00000552259 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.06
CPNE8-209ENST00000552259 TRIM6-TRIM34B2RNG4 842 aa8.46□□□□□ -1.06
CPNE8-209ENST00000552259 COL9A1P20849 921 aa8.46□□□□□ -1.06
CPNE8-209ENST00000552259 LAPTM4BQ86VI4 370 aa8.46□□□□□ -1.06
CPNE8-209ENST00000552259 PACS2Q86VP3 889 aa8.46□□□□□ -1.06
CPNE8-209ENST00000552259 TESPA1A2RU30 521 aaPredicted RBP8.45□□□□□ -1.06
CPNE8-209ENST00000552259 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
CPNE8-209ENST00000552259 SEMA3EO15041 775 aa8.45□□□□□ -1.06
CPNE8-209ENST00000552259 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
CPNE8-209ENST00000552259 MLLT3P42568 568 aaPredicted RBP8.44□□□□□ -1.06
CPNE8-209ENST00000552259 PRSS12P56730 875 aa8.44□□□□□ -1.06
CPNE8-209ENST00000552259 NBPF26B4DH59 902 aa8.42□□□□□ -1.06
CPNE8-209ENST00000552259 PROX2Q3B8N5 592 aa8.42□□□□□ -1.06
CPNE8-209ENST00000552259 CDCA7LQ96GN5 454 aa8.42□□□□□ -1.06
CPNE8-209ENST00000552259 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.06
CPNE8-209ENST00000552259 KIAA1468Q9P260 1216 aa8.4□□□□□ -1.06
CPNE8-209ENST00000552259 HCSTQ9UBK5 93 aa8.4□□□□□ -1.06
CPNE8-209ENST00000552259 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
CPNE8-209ENST00000552259 FCHSD2O94868 740 aa8.39□□□□□ -1.07
CPNE8-209ENST00000552259 PRIM1P49642 420 aaKnown RBP8.39□□□□□ -1.07
CPNE8-209ENST00000552259 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
CPNE8-209ENST00000552259 CDHR5Q9HBB8 845 aa8.38□□□□□ -1.07
CPNE8-209ENST00000552259 PTGDRQ13258 359 aa8.37□□□□□ -1.07
CPNE8-209ENST00000552259 WNT2BQ93097 391 aa8.37□□□□□ -1.07
CPNE8-209ENST00000552259 KCTD12Q96CX2 325 aaKnown RBP8.37□□□□□ -1.07
CPNE8-209ENST00000552259 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
CPNE8-209ENST00000552259 HIC1Q14526 733 aa8.36□□□□□ -1.07
CPNE8-209ENST00000552259 HDGFP51858 240 aaKnown RBP8.35□□□□□ -1.07
CPNE8-209ENST00000552259 TTC13Q8NBP0 860 aa8.35□□□□□ -1.07
CPNE8-209ENST00000552259 NECTIN2Q92692 538 aa8.35□□□□□ -1.07
CPNE8-209ENST00000552259 ZFRQ96KR1 1074 aaKnown RBP8.35□□□□□ -1.07
CPNE8-209ENST00000552259 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
CPNE8-209ENST00000552259 SLC24A1O60721 1099 aa8.34□□□□□ -1.07
CPNE8-209ENST00000552259 SLC4A3P48751 1232 aa8.34□□□□□ -1.07
CPNE8-209ENST00000552259 PADI6Q6TGC4 694 aa8.34□□□□□ -1.07
CPNE8-209ENST00000552259 THSD4Q6ZMP0 1018 aa8.34□□□□□ -1.07
CPNE8-209ENST00000552259 NYAP1Q6ZVC0 841 aa8.34□□□□□ -1.07
CPNE8-209ENST00000552259 TATDN2Q93075 761 aa8.34□□□□□ -1.07
CPNE8-209ENST00000552259 PNMA3Q9UL41 463 aa8.33□□□□□ -1.08
CPNE8-209ENST00000552259 GPIHBP1Q8IV16 184 aa8.32□□□□□ -1.08
CPNE8-209ENST00000552259 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
CPNE8-209ENST00000552259 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
CPNE8-209ENST00000552259 SOWAHBA6NEL2 793 aa8.31□□□□□ -1.08
CPNE8-209ENST00000552259 RBM26Q5T8P6 1007 aaKnown RBP8.31□□□□□ -1.08
CPNE8-209ENST00000552259 RBM46Q8TBY0 533 aaKnown RBP8.31□□□□□ -1.08
CPNE8-209ENST00000552259 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.31□□□□□ -1.08
CPNE8-209ENST00000552259 GNPATO15228 680 aa8.3□□□□□ -1.08
CPNE8-209ENST00000552259 NUDT18Q6ZVK8 323 aa8.3□□□□□ -1.08
CPNE8-209ENST00000552259 OATP04181 439 aa8.29□□□□□ -1.08
CPNE8-209ENST00000552259 FAM198AQ9UFP1 575 aa8.29□□□□□ -1.08
CPNE8-209ENST00000552259 PTPN5P54829 565 aa8.27□□□□□ -1.09
CPNE8-209ENST00000552259 TSR3Q9UJK0 312 aaKnown RBP8.27□□□□□ -1.09
CPNE8-209ENST00000552259 DNAJB2P25686 324 aa8.26□□□□□ -1.09
CPNE8-209ENST00000552259 SLF2Q8IX21 1173 aa8.26□□□□□ -1.09
CPNE8-209ENST00000552259 ADGRG1Q9Y653 693 aa8.26□□□□□ -1.09
CPNE8-209ENST00000552259 SMAPO00193 183 aa8.25□□□□□ -1.09
CPNE8-209ENST00000552259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
CPNE8-209ENST00000552259 BCAMP50895 628 aa8.24□□□□□ -1.09
CPNE8-209ENST00000552259 SAMD7Q7Z3H4 446 aa8.24□□□□□ -1.09
CPNE8-209ENST00000552259 EYA1Q99502 592 aa8.24□□□□□ -1.09
CPNE8-209ENST00000552259 GPR37O15354 613 aa8.23□□□□□ -1.09
CPNE8-209ENST00000552259 PPP4CP60510 307 aa8.23□□□□□ -1.09
CPNE8-209ENST00000552259 PRR14Q9BWN1 585 aa8.23□□□□□ -1.09
CPNE8-209ENST00000552259 HPS5Q9UPZ3 1129 aa8.23□□□□□ -1.09
CPNE8-209ENST00000552259 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
CPNE8-209ENST00000552259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.22□□□□□ -1.09
CPNE8-209ENST00000552259 RSPH4AQ5TD94 716 aa8.21□□□□□ -1.1
CPNE8-209ENST00000552259 PXYLP1Q8TE99 480 aa8.2□□□□□ -1.1
CPNE8-209ENST00000552259 TMEM134Q9H6X4 195 aa8.2□□□□□ -1.1
CPNE8-209ENST00000552259 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
CPNE8-209ENST00000552259 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
CPNE8-209ENST00000552259 RNF40O75150 1001 aa8.19□□□□□ -1.1
CPNE8-209ENST00000552259 MAP2K5Q13163 448 aa8.19□□□□□ -1.1
CPNE8-209ENST00000552259 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
CPNE8-209ENST00000552259 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms