RNA–Protein interactions for RNA: ENST00000552259.5

CPNE8-209, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-209ENST00000552259 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
CPNE8-209ENST00000552259 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
CPNE8-209ENST00000552259 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
CPNE8-209ENST00000552259 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
CPNE8-209ENST00000552259 FOXD1Q16676 465 aa15.68■□□□□ 0.1
CPNE8-209ENST00000552259 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
CPNE8-209ENST00000552259 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
CPNE8-209ENST00000552259 ADRA2BP18089 450 aa14.89□□□□□ -0.03
CPNE8-209ENST00000552259 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
CPNE8-209ENST00000552259 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
CPNE8-209ENST00000552259 MSH5O43196 834 aa14.71□□□□□ -0.05
CPNE8-209ENST00000552259 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
CPNE8-209ENST00000552259 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
CPNE8-209ENST00000552259 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
CPNE8-209ENST00000552259 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
CPNE8-209ENST00000552259 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
CPNE8-209ENST00000552259 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
CPNE8-209ENST00000552259 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
CPNE8-209ENST00000552259 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
CPNE8-209ENST00000552259 KCNA4P22459 653 aa13.14□□□□□ -0.31
CPNE8-209ENST00000552259 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
CPNE8-209ENST00000552259 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
CPNE8-209ENST00000552259 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
CPNE8-209ENST00000552259 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
CPNE8-209ENST00000552259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPNE8-209ENST00000552259 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
CPNE8-209ENST00000552259 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
CPNE8-209ENST00000552259 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
CPNE8-209ENST00000552259 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
CPNE8-209ENST00000552259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
CPNE8-209ENST00000552259 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
CPNE8-209ENST00000552259 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
CPNE8-209ENST00000552259 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
CPNE8-209ENST00000552259 APLP2Q06481 763 aa12.25□□□□□ -0.45
CPNE8-209ENST00000552259 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
CPNE8-209ENST00000552259 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
CPNE8-209ENST00000552259 POTEHQ6S545 545 aa12.05□□□□□ -0.48
CPNE8-209ENST00000552259 ZBTB22O15209 634 aa12.01□□□□□ -0.49
CPNE8-209ENST00000552259 CAPN15O75808 1086 aa11.99□□□□□ -0.49
CPNE8-209ENST00000552259 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
CPNE8-209ENST00000552259 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
CPNE8-209ENST00000552259 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
CPNE8-209ENST00000552259 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
CPNE8-209ENST00000552259 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
CPNE8-209ENST00000552259 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
CPNE8-209ENST00000552259 DSG3P32926 999 aa11.8□□□□□ -0.52
CPNE8-209ENST00000552259 ABCB7O75027 752 aa11.67□□□□□ -0.54
CPNE8-209ENST00000552259 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-209ENST00000552259 POLA2Q14181 598 aa11.64□□□□□ -0.55
CPNE8-209ENST00000552259 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
CPNE8-209ENST00000552259 FBLN2P98095 1184 aa11.44□□□□□ -0.58
CPNE8-209ENST00000552259 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
CPNE8-209ENST00000552259 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
CPNE8-209ENST00000552259 SPDYE2BA6NHP3 402 aa11.22□□□□□ -0.61
CPNE8-209ENST00000552259 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
CPNE8-209ENST00000552259 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
CPNE8-209ENST00000552259 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
CPNE8-209ENST00000552259 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
CPNE8-209ENST00000552259 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
CPNE8-209ENST00000552259 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
CPNE8-209ENST00000552259 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
CPNE8-209ENST00000552259 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
CPNE8-209ENST00000552259 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
CPNE8-209ENST00000552259 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
CPNE8-209ENST00000552259 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
CPNE8-209ENST00000552259 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
CPNE8-209ENST00000552259 PITPNM1O00562 1244 aa10.84□□□□□ -0.67
CPNE8-209ENST00000552259 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
CPNE8-209ENST00000552259 CLEC11AQ9Y240 323 aa10.8□□□□□ -0.68
CPNE8-209ENST00000552259 FKBP8Q14318 412 aa10.79□□□□□ -0.68
CPNE8-209ENST00000552259 PROM2Q8N271 834 aa10.77□□□□□ -0.69
CPNE8-209ENST00000552259 PRR29P0C7W0 189 aa10.73□□□□□ -0.69
CPNE8-209ENST00000552259 FXR2P51116 673 aaKnown RBP eCLIP10.7□□□□□ -0.7
CPNE8-209ENST00000552259 PIP4P2Q8N4L2 257 aa10.67□□□□□ -0.7
CPNE8-209ENST00000552259 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
CPNE8-209ENST00000552259 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
CPNE8-209ENST00000552259 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
CPNE8-209ENST00000552259 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
CPNE8-209ENST00000552259 CREBZFQ9NS37 354 aa10.47□□□□□ -0.73
CPNE8-209ENST00000552259 ZBTB47Q9UFB7 747 aaPredicted RBP10.46□□□□□ -0.73
CPNE8-209ENST00000552259 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPNE8-209ENST00000552259 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
CPNE8-209ENST00000552259 MIER1Q8N108 512 aa10.44□□□□□ -0.74
CPNE8-209ENST00000552259 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
CPNE8-209ENST00000552259 HAX1O00165 279 aa10.42□□□□□ -0.74
CPNE8-209ENST00000552259 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
CPNE8-209ENST00000552259 C19orf67A6NJJ6 358 aa10.34□□□□□ -0.75
CPNE8-209ENST00000552259 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
CPNE8-209ENST00000552259 MNX1P50219 401 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-209ENST00000552259 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
CPNE8-209ENST00000552259 CLCN6P51797 869 aa10.28□□□□□ -0.76
CPNE8-209ENST00000552259 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
CPNE8-209ENST00000552259 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
CPNE8-209ENST00000552259 LHX8Q68G74 356 aa10.2□□□□□ -0.78
CPNE8-209ENST00000552259 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
CPNE8-209ENST00000552259 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
CPNE8-209ENST00000552259 FAM212AQ96EL1 285 aa10.18□□□□□ -0.78
CPNE8-209ENST00000552259 EVX2Q03828 476 aa10.15□□□□□ -0.78
CPNE8-209ENST00000552259 NUBP1P53384 320 aa10.14□□□□□ -0.79
CPNE8-209ENST00000552259 SPOCK2Q92563 424 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms