RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
RAB5C-208ENST00000551338 MAP3K4Q9Y6R4 1608 aa16.32■□□□□ 0.2
RAB5C-208ENST00000551338 CEP152O94986 1710 aa16.31■□□□□ 0.2
RAB5C-208ENST00000551338 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
RAB5C-208ENST00000551338 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
RAB5C-208ENST00000551338 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
RAB5C-208ENST00000551338 RALGAPBQ86X10 1494 aa16.3■□□□□ 0.2
RAB5C-208ENST00000551338 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
RAB5C-208ENST00000551338 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
RAB5C-208ENST00000551338 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-208ENST00000551338 ATP10AO60312 1499 aa16.29■□□□□ 0.2
RAB5C-208ENST00000551338 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
RAB5C-208ENST00000551338 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
RAB5C-208ENST00000551338 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
RAB5C-208ENST00000551338 BCORL1Q5H9F3 1711 aa16.28■□□□□ 0.2
RAB5C-208ENST00000551338 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
RAB5C-208ENST00000551338 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
RAB5C-208ENST00000551338 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
RAB5C-208ENST00000551338 ABCA6Q8N139 1617 aa16.27■□□□□ 0.19
RAB5C-208ENST00000551338 GLI2P10070 1586 aa16.26■□□□□ 0.19
RAB5C-208ENST00000551338 RICTORQ6R327 1708 aa16.26■□□□□ 0.19
RAB5C-208ENST00000551338 YTHDC1Q96MU7 727 aaKnown RBP16.26■□□□□ 0.19
RAB5C-208ENST00000551338 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
RAB5C-208ENST00000551338 POGZQ7Z3K3 1410 aa16.26■□□□□ 0.19
RAB5C-208ENST00000551338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.198e-8■■□□□ 12.7
RAB5C-208ENST00000551338 TRPM2O94759 1503 aa16.24■□□□□ 0.19
RAB5C-208ENST00000551338 NEO1Q92859 1461 aa16.24■□□□□ 0.19
RAB5C-208ENST00000551338 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
RAB5C-208ENST00000551338 LAMC1P11047 1609 aa16.23■□□□□ 0.19
RAB5C-208ENST00000551338 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
RAB5C-208ENST00000551338 A2MP01023 1474 aa16.23■□□□□ 0.19
RAB5C-208ENST00000551338 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
RAB5C-208ENST00000551338 DIP2BQ9P265 1576 aa16.21■□□□□ 0.19
RAB5C-208ENST00000551338 PPRC1Q5VV67 1664 aaKnown RBP16.21■□□□□ 0.19
RAB5C-208ENST00000551338 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
RAB5C-208ENST00000551338 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
RAB5C-208ENST00000551338 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
RAB5C-208ENST00000551338 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
RAB5C-208ENST00000551338 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
RAB5C-208ENST00000551338 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
RAB5C-208ENST00000551338 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
RAB5C-208ENST00000551338 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
RAB5C-208ENST00000551338 USP47Q96K76 1375 aa16.18■□□□□ 0.18
RAB5C-208ENST00000551338 KIF1BO60333 1816 aa16.18■□□□□ 0.18
RAB5C-208ENST00000551338 LMTK2Q8IWU2 1503 aa16.18■□□□□ 0.18
RAB5C-208ENST00000551338 PTPRTO14522 1441 aa16.18■□□□□ 0.18
RAB5C-208ENST00000551338 MADDQ8WXG6 1647 aa16.17■□□□□ 0.18
RAB5C-208ENST00000551338 C11orf95C9JLR9 678 aaPredicted RBP16.17■□□□□ 0.18
RAB5C-208ENST00000551338 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
RAB5C-208ENST00000551338 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
RAB5C-208ENST00000551338 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
RAB5C-208ENST00000551338 NEURL4Q96JN8 1562 aa16.16■□□□□ 0.18
RAB5C-208ENST00000551338 KANK1Q14678 1352 aa16.15■□□□□ 0.18
RAB5C-208ENST00000551338 TSPOAP1O95153 1857 aa16.15■□□□□ 0.18
RAB5C-208ENST00000551338 ANP32CO43423 234 aa16.13■□□□□ 0.17
RAB5C-208ENST00000551338 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
RAB5C-208ENST00000551338 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 KIF3BO15066 747 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 KDM2AQ9Y2K7 1162 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
RAB5C-208ENST00000551338 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
RAB5C-208ENST00000551338 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
RAB5C-208ENST00000551338 CFAP65Q6ZU64 1925 aaKnown RBP16.11■□□□□ 0.17
RAB5C-208ENST00000551338 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
RAB5C-208ENST00000551338 ZMYM4Q5VZL5 1548 aa16.1■□□□□ 0.17
RAB5C-208ENST00000551338 ZC3H13Q5T200 1668 aaKnown RBP16.1■□□□□ 0.17
RAB5C-208ENST00000551338 KIAA1210Q9ULL0 1709 aa16.1■□□□□ 0.17
RAB5C-208ENST00000551338 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
RAB5C-208ENST00000551338 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.17
RAB5C-208ENST00000551338 ROCK2O75116 1388 aaKnown RBP16.08■□□□□ 0.16
RAB5C-208ENST00000551338 ABCC3O15438 1527 aa16.08■□□□□ 0.16
RAB5C-208ENST00000551338 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
RAB5C-208ENST00000551338 RGL3Q3MIN7 710 aa16.06■□□□□ 0.16
RAB5C-208ENST00000551338 PPLO60437 1756 aa16.05■□□□□ 0.16
RAB5C-208ENST00000551338 ADGRB3O60242 1522 aa16.04■□□□□ 0.16
RAB5C-208ENST00000551338 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
RAB5C-208ENST00000551338 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
RAB5C-208ENST00000551338 YEATS2Q9ULM3 1422 aa16.02■□□□□ 0.16
RAB5C-208ENST00000551338 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
RAB5C-208ENST00000551338 RAPGEF3O95398 923 aa16.02■□□□□ 0.16
RAB5C-208ENST00000551338 MYOM2P54296 1465 aa16.02■□□□□ 0.15
RAB5C-208ENST00000551338 NPATQ14207 1427 aa16.01■□□□□ 0.15
RAB5C-208ENST00000551338 REREQ9P2R6 1566 aa16■□□□□ 0.15
RAB5C-208ENST00000551338 COL17A1Q9UMD9 1497 aaPredicted RBP16■□□□□ 0.15
RAB5C-208ENST00000551338 NBPF1Q3BBV0 1214 aa16■□□□□ 0.15
RAB5C-208ENST00000551338 SYNMO15061 1565 aa15.99■□□□□ 0.15
RAB5C-208ENST00000551338 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
RAB5C-208ENST00000551338 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
RAB5C-208ENST00000551338 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
RAB5C-208ENST00000551338 FAM69CQ0P6D2 419 aa15.96■□□□□ 0.15
RAB5C-208ENST00000551338 NRXN1Q9ULB1 1477 aa15.96■□□□□ 0.14
RAB5C-208ENST00000551338 NOS1P29475 1434 aa15.95■□□□□ 0.14
RAB5C-208ENST00000551338 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
RAB5C-208ENST00000551338 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
RAB5C-208ENST00000551338 GGT6Q6P531 493 aa15.93■□□□□ 0.14
RAB5C-208ENST00000551338 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
RAB5C-208ENST00000551338 AGLP35573 1532 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms