RNA–Protein interactions for RNA: ENST00000551075.1

AC090049.1-201, humanhuman

TSL 3 BASIC

Gene AC090049.1, Length 1,011 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090049.1-201ENST00000551075 COL9A1P20849 921 aa12.69□□□□□ -0.38
AC090049.1-201ENST00000551075 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
AC090049.1-201ENST00000551075 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
AC090049.1-201ENST00000551075 EPAS1Q99814 870 aa12.64□□□□□ -0.39
AC090049.1-201ENST00000551075 A0A0G2JS52 829 aa12.63□□□□□ -0.39
AC090049.1-201ENST00000551075 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
AC090049.1-201ENST00000551075 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
AC090049.1-201ENST00000551075 DPYSL4O14531 572 aa12.61□□□□□ -0.39
AC090049.1-201ENST00000551075 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
AC090049.1-201ENST00000551075 KIAA1468Q9P260 1216 aa12.58□□□□□ -0.4
AC090049.1-201ENST00000551075 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
AC090049.1-201ENST00000551075 ITGBL1O95965 494 aaPredicted RBP12.57□□□□□ -0.4
AC090049.1-201ENST00000551075 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
AC090049.1-201ENST00000551075 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
AC090049.1-201ENST00000551075 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
AC090049.1-201ENST00000551075 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
AC090049.1-201ENST00000551075 BCAMP50895 628 aa12.54□□□□□ -0.4
AC090049.1-201ENST00000551075 PDIA6Q15084 440 aa12.5□□□□□ -0.41
AC090049.1-201ENST00000551075 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
AC090049.1-201ENST00000551075 DDX12PQ92771 950 aa12.5□□□□□ -0.41
AC090049.1-201ENST00000551075 SEPT9Q9UHD8 586 aaPredicted RBP12.49□□□□□ -0.41
AC090049.1-201ENST00000551075 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
AC090049.1-201ENST00000551075 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
AC090049.1-201ENST00000551075 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
AC090049.1-201ENST00000551075 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
AC090049.1-201ENST00000551075 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
AC090049.1-201ENST00000551075 NBR1Q14596 966 aa12.44□□□□□ -0.42
AC090049.1-201ENST00000551075 ARIH1Q9Y4X5 557 aaPredicted RBP12.43□□□□□ -0.42
AC090049.1-201ENST00000551075 TSR1Q2NL82 804 aaKnown RBP12.42□□□□□ -0.42
AC090049.1-201ENST00000551075 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.42□□□□□ -0.42
AC090049.1-201ENST00000551075 TSR3Q9UJK0 312 aaKnown RBP12.42□□□□□ -0.42
AC090049.1-201ENST00000551075 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
AC090049.1-201ENST00000551075 MAP3K7O43318 606 aa12.41□□□□□ -0.42
AC090049.1-201ENST00000551075 LRCH3Q96II8 777 aa12.41□□□□□ -0.42
AC090049.1-201ENST00000551075 KCNC4Q03721 635 aa12.4□□□□□ -0.42
AC090049.1-201ENST00000551075 PACS2Q86VP3 889 aa12.4□□□□□ -0.42
AC090049.1-201ENST00000551075 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
AC090049.1-201ENST00000551075 HPS5Q9UPZ3 1129 aa12.38□□□□□ -0.43
AC090049.1-201ENST00000551075 E2F4Q16254 413 aa12.37□□□□□ -0.43
AC090049.1-201ENST00000551075 CERKQ8TCT0 537 aa12.36□□□□□ -0.43
AC090049.1-201ENST00000551075 CDCA7LQ96GN5 454 aa12.35□□□□□ -0.43
AC090049.1-201ENST00000551075 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
AC090049.1-201ENST00000551075 PRSS12P56730 875 aa12.34□□□□□ -0.43
AC090049.1-201ENST00000551075 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
AC090049.1-201ENST00000551075 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
AC090049.1-201ENST00000551075 PPP4CP60510 307 aa12.29□□□□□ -0.44
AC090049.1-201ENST00000551075 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
AC090049.1-201ENST00000551075 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
AC090049.1-201ENST00000551075 NBPF26B4DH59 902 aa12.27□□□□□ -0.45
AC090049.1-201ENST00000551075 TATDN2Q93075 761 aa12.27□□□□□ -0.45
AC090049.1-201ENST00000551075 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
AC090049.1-201ENST00000551075 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
AC090049.1-201ENST00000551075 SMAPO00193 183 aa12.26□□□□□ -0.45
AC090049.1-201ENST00000551075 OSBPP22059 807 aa12.26□□□□□ -0.45
AC090049.1-201ENST00000551075 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
AC090049.1-201ENST00000551075 WDR70Q9NW82 654 aa12.25□□□□□ -0.45
AC090049.1-201ENST00000551075 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
AC090049.1-201ENST00000551075 CDHR5Q9HBB8 845 aa12.23□□□□□ -0.45
AC090049.1-201ENST00000551075 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
AC090049.1-201ENST00000551075 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
AC090049.1-201ENST00000551075 TTC13Q8NBP0 860 aa12.2□□□□□ -0.46
AC090049.1-201ENST00000551075 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
AC090049.1-201ENST00000551075 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
AC090049.1-201ENST00000551075 MTRQ99707 1265 aa12.18□□□□□ -0.46
AC090049.1-201ENST00000551075 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
AC090049.1-201ENST00000551075 LAPTM4AQ15012 233 aa12.17□□□□□ -0.46
AC090049.1-201ENST00000551075 Q6ZNB5 142 aa12.17□□□□□ -0.46
AC090049.1-201ENST00000551075 NPDC1Q9NQX5 325 aaPredicted RBP12.16□□□□□ -0.46
AC090049.1-201ENST00000551075 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
AC090049.1-201ENST00000551075 APLP1P51693 650 aa12.13□□□□□ -0.47
AC090049.1-201ENST00000551075 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
AC090049.1-201ENST00000551075 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
AC090049.1-201ENST00000551075 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
AC090049.1-201ENST00000551075 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
AC090049.1-201ENST00000551075 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
AC090049.1-201ENST00000551075 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
AC090049.1-201ENST00000551075 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
AC090049.1-201ENST00000551075 RNF40O75150 1001 aa12.08□□□□□ -0.48
AC090049.1-201ENST00000551075 SLF2Q8IX21 1173 aa12.08□□□□□ -0.48
AC090049.1-201ENST00000551075 GFRA3O60609 400 aa12.07□□□□□ -0.48
AC090049.1-201ENST00000551075 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
AC090049.1-201ENST00000551075 EYA1Q99502 592 aa12.07□□□□□ -0.48
AC090049.1-201ENST00000551075 LCE2BO14633 110 aa12.06□□□□□ -0.48
AC090049.1-201ENST00000551075 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
AC090049.1-201ENST00000551075 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
AC090049.1-201ENST00000551075 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
AC090049.1-201ENST00000551075 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
AC090049.1-201ENST00000551075 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
AC090049.1-201ENST00000551075 SLC4A3P48751 1232 aa12□□□□□ -0.49
AC090049.1-201ENST00000551075 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
AC090049.1-201ENST00000551075 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
AC090049.1-201ENST00000551075 GGCXP38435 758 aa11.98□□□□□ -0.49
AC090049.1-201ENST00000551075 COPS2P61201 443 aa11.98□□□□□ -0.49
AC090049.1-201ENST00000551075 PTGDRQ13258 359 aa11.98□□□□□ -0.49
AC090049.1-201ENST00000551075 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
AC090049.1-201ENST00000551075 ZPR1O75312 459 aa11.97□□□□□ -0.49
AC090049.1-201ENST00000551075 KCNV2Q8TDN2 545 aa11.97□□□□□ -0.49
AC090049.1-201ENST00000551075 DNAJB2P25686 324 aa11.94□□□□□ -0.5
AC090049.1-201ENST00000551075 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
AC090049.1-201ENST00000551075 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms