RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ST18O60284 1047 aa15.56■□□□□ 0.08
RAB3IP-212ENST00000550536 KIF16BQ96L93 1317 aa15.56■□□□□ 0.08
RAB3IP-212ENST00000550536 USP35Q9P2H5 1018 aa15.55■□□□□ 0.08
RAB3IP-212ENST00000550536 CCDC144AA2RUR9 1427 aa15.55■□□□□ 0.08
RAB3IP-212ENST00000550536 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
RAB3IP-212ENST00000550536 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
RAB3IP-212ENST00000550536 SLC4A10Q6U841 1118 aa15.54■□□□□ 0.08
RAB3IP-212ENST00000550536 GOLGA6L3A6NEY3 463 aa15.53■□□□□ 0.08
RAB3IP-212ENST00000550536 AMPHP49418 695 aa15.53■□□□□ 0.08
RAB3IP-212ENST00000550536 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
RAB3IP-212ENST00000550536 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
RAB3IP-212ENST00000550536 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
RAB3IP-212ENST00000550536 CUX1P39880 1505 aa15.53■□□□□ 0.08
RAB3IP-212ENST00000550536 RSPH4AQ5TD94 716 aa15.51■□□□□ 0.07
RAB3IP-212ENST00000550536 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
RAB3IP-212ENST00000550536 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
RAB3IP-212ENST00000550536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.51■□□□□ 0.07
RAB3IP-212ENST00000550536 CCDC146Q8IYE0 955 aa15.51■□□□□ 0.07
RAB3IP-212ENST00000550536 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
RAB3IP-212ENST00000550536 KIF3BO15066 747 aa15.5■□□□□ 0.07
RAB3IP-212ENST00000550536 PRM3Q9NNZ6 103 aa15.49■□□□□ 0.07
RAB3IP-212ENST00000550536 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
RAB3IP-212ENST00000550536 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
RAB3IP-212ENST00000550536 FRAT2O75474 233 aaPredicted RBP15.48■□□□□ 0.07
RAB3IP-212ENST00000550536 CGNL1Q0VF96 1302 aa15.48■□□□□ 0.07
RAB3IP-212ENST00000550536 VPS53Q5VIR6 699 aa15.48■□□□□ 0.07
RAB3IP-212ENST00000550536 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
RAB3IP-212ENST00000550536 DDX11L8A8MPP1 907 aa15.47■□□□□ 0.07
RAB3IP-212ENST00000550536 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 ARID3AQ99856 593 aa15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 H3BQV1 296 aa15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 IFFO2Q5TF58 517 aa15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 TPM3P06753 285 aa15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 CEP89Q96ST8 783 aa15.46■□□□□ 0.07
RAB3IP-212ENST00000550536 NOL8Q76FK4 1167 aaKnown RBP15.46■□□□□ 0.06
RAB3IP-212ENST00000550536 MYBBP1AQ9BQG0 1328 aaKnown RBP15.45■□□□□ 0.06
RAB3IP-212ENST00000550536 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
RAB3IP-212ENST00000550536 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
RAB3IP-212ENST00000550536 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
RAB3IP-212ENST00000550536 SF3A1Q15459 793 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-212ENST00000550536 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
RAB3IP-212ENST00000550536 LRRFIP1Q32MZ4 808 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-212ENST00000550536 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
RAB3IP-212ENST00000550536 TSR1Q2NL82 804 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-212ENST00000550536 CLUAP1Q96AJ1 413 aa15.43■□□□□ 0.06
RAB3IP-212ENST00000550536 C1orf141Q5JVX7 400 aa15.43■□□□□ 0.06
RAB3IP-212ENST00000550536 MARCH6O60337 910 aa15.43■□□□□ 0.06
RAB3IP-212ENST00000550536 TPD52L1Q16890 204 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-212ENST00000550536 NUTM2DQ5VT03 806 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-212ENST00000550536 LTV1Q96GA3 475 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-212ENST00000550536 TNNT3P45378 269 aaPredicted RBP15.42■□□□□ 0.06
RAB3IP-212ENST00000550536 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
RAB3IP-212ENST00000550536 PES1O00541 588 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-212ENST00000550536 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
RAB3IP-212ENST00000550536 TPM2P07951 284 aa15.4■□□□□ 0.06
RAB3IP-212ENST00000550536 CENPQQ7L2Z9 268 aaPredicted RBP15.4■□□□□ 0.06
RAB3IP-212ENST00000550536 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
RAB3IP-212ENST00000550536 AKAP17AQ02040 695 aaKnown RBP15.4■□□□□ 0.06
RAB3IP-212ENST00000550536 PDE4CQ08493 712 aa15.4■□□□□ 0.06
RAB3IP-212ENST00000550536 ROCK1Q13464 1354 aa15.4■□□□□ 0.06
RAB3IP-212ENST00000550536 COG3Q96JB2 828 aa15.39■□□□□ 0.05
RAB3IP-212ENST00000550536 RILPL2Q969X0 211 aa15.39■□□□□ 0.05
RAB3IP-212ENST00000550536 GOLGA6L19H0YKK7 550 aa15.39■□□□□ 0.05
RAB3IP-212ENST00000550536 TCEAL9Q9UHQ7 104 aa15.39■□□□□ 0.05
RAB3IP-212ENST00000550536 SUPT6HQ7KZ85 1726 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-212ENST00000550536 USP47Q96K76 1375 aa15.38■□□□□ 0.05
RAB3IP-212ENST00000550536 FAM184AQ8NB25 1140 aa15.38■□□□□ 0.05
RAB3IP-212ENST00000550536 TPM1P09493 284 aa15.38■□□□□ 0.05
RAB3IP-212ENST00000550536 AMOTL1Q8IY63 956 aa15.38■□□□□ 0.05
RAB3IP-212ENST00000550536 NEXNQ0ZGT2 675 aa15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 E9PSI1 815 aa15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 FOXD4L5Q5VV16 416 aaPredicted RBP15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 CCDC70Q6NSX1 233 aa15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 FOXD4L4Q8WXT5 416 aaPredicted RBP15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 NOL10Q9BSC4 688 aaKnown RBP15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 EVA1CP58658 441 aa15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 ANKRD45Q5TZF3 282 aa15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
RAB3IP-212ENST00000550536 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
RAB3IP-212ENST00000550536 SKOR2Q2VWA4 1001 aaPredicted RBP15.35■□□□□ 0.05
RAB3IP-212ENST00000550536 DIAPH3Q9NSV4 1193 aa15.35■□□□□ 0.05
RAB3IP-212ENST00000550536 PANK3Q9H999 370 aa15.35■□□□□ 0.05
RAB3IP-212ENST00000550536 NUTM2FA1L443 756 aa15.34■□□□□ 0.05
RAB3IP-212ENST00000550536 SYNE3Q6ZMZ3 975 aa15.34■□□□□ 0.05
RAB3IP-212ENST00000550536 TTC5Q8N0Z6 440 aa15.34■□□□□ 0.05
RAB3IP-212ENST00000550536 C9orf78Q9NZ63 289 aaPredicted RBP15.34■□□□□ 0.05
RAB3IP-212ENST00000550536 FAM161AQ3B820 660 aa15.34■□□□□ 0.05
RAB3IP-212ENST00000550536 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
RAB3IP-212ENST00000550536 ZBED9Q6R2W3 1325 aa15.33■□□□□ 0.05
RAB3IP-212ENST00000550536 RUFY2Q8WXA3 655 aa15.33■□□□□ 0.05
RAB3IP-212ENST00000550536 REC8O95072 547 aa15.33■□□□□ 0.04
RAB3IP-212ENST00000550536 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.04
RAB3IP-212ENST00000550536 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
RAB3IP-212ENST00000550536 SETQ01105 290 aaPredicted RBP15.32■□□□□ 0.04
RAB3IP-212ENST00000550536 HOOK1Q9UJC3 728 aaKnown RBP15.32■□□□□ 0.04
RAB3IP-212ENST00000550536 VGFO15240 615 aaPredicted RBP15.32■□□□□ 0.04
RAB3IP-212ENST00000550536 ST20-MTHFSA0A0A6YYL1 179 aa15.31■□□□□ 0.04
RAB3IP-212ENST00000550536 BECN2A8MW95 431 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms