RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 DDRGK1Q96HY6 314 aa11.04□□□□□ -0.64
EFCAB11-203ENST00000550103 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
EFCAB11-203ENST00000550103 TRIM35Q9UPQ4 493 aa11.04□□□□□ -0.64
EFCAB11-203ENST00000550103 MAP3K9P80192 1104 aa11.03□□□□□ -0.64
EFCAB11-203ENST00000550103 DPY19L2Q6NUT2 758 aa11.02□□□□□ -0.65
EFCAB11-203ENST00000550103 ERICH3Q5RHP9 1530 aa11.02□□□□□ -0.65
EFCAB11-203ENST00000550103 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.65
EFCAB11-203ENST00000550103 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.65
EFCAB11-203ENST00000550103 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.65
EFCAB11-203ENST00000550103 IRF6O14896 467 aa11.01□□□□□ -0.65
EFCAB11-203ENST00000550103 NUTM2FA1L443 756 aa11□□□□□ -0.65
EFCAB11-203ENST00000550103 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
EFCAB11-203ENST00000550103 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
EFCAB11-203ENST00000550103 AMHR2Q16671 573 aa11□□□□□ -0.65
EFCAB11-203ENST00000550103 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
EFCAB11-203ENST00000550103 FAM117AQ9C073 453 aa11□□□□□ -0.65
EFCAB11-203ENST00000550103 SYNJ2O15056 1496 aa11□□□□□ -0.65
EFCAB11-203ENST00000550103 CLCN6P51797 869 aa10.99□□□□□ -0.65
EFCAB11-203ENST00000550103 CLASP1Q7Z460 1538 aa10.99□□□□□ -0.65
EFCAB11-203ENST00000550103 G3V3G9 751 aa10.98□□□□□ -0.65
EFCAB11-203ENST00000550103 KIF3CO14782 793 aa10.98□□□□□ -0.65
EFCAB11-203ENST00000550103 GNPATO15228 680 aa10.98□□□□□ -0.65
EFCAB11-203ENST00000550103 HIC1Q14526 733 aa10.98□□□□□ -0.65
EFCAB11-203ENST00000550103 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
EFCAB11-203ENST00000550103 PTGER2P43116 358 aa10.97□□□□□ -0.65
EFCAB11-203ENST00000550103 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
EFCAB11-203ENST00000550103 BOLA1Q9Y3E2 137 aa10.97□□□□□ -0.65
EFCAB11-203ENST00000550103 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
EFCAB11-203ENST00000550103 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
EFCAB11-203ENST00000550103 C2orf72A6NCS6 295 aa10.96□□□□□ -0.65
EFCAB11-203ENST00000550103 FCHSD2O94868 740 aa10.96□□□□□ -0.65
EFCAB11-203ENST00000550103 OSBPP22059 807 aa10.96□□□□□ -0.65
EFCAB11-203ENST00000550103 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
EFCAB11-203ENST00000550103 EEA1Q15075 1411 aa10.95□□□□□ -0.66
EFCAB11-203ENST00000550103 FLIIQ13045 1269 aa10.95□□□□□ -0.66
EFCAB11-203ENST00000550103 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
EFCAB11-203ENST00000550103 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
EFCAB11-203ENST00000550103 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
EFCAB11-203ENST00000550103 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
EFCAB11-203ENST00000550103 IER5LQ5T953 404 aa10.93□□□□□ -0.66
EFCAB11-203ENST00000550103 ARHGEF11O15085 1522 aa10.93□□□□□ -0.66
EFCAB11-203ENST00000550103 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
EFCAB11-203ENST00000550103 TBC1D12O60347 775 aa10.92□□□□□ -0.66
EFCAB11-203ENST00000550103 IRX5P78411 483 aaPredicted RBP10.92□□□□□ -0.66
EFCAB11-203ENST00000550103 PARP9Q8IXQ6 854 aa10.92□□□□□ -0.66
EFCAB11-203ENST00000550103 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
EFCAB11-203ENST00000550103 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
EFCAB11-203ENST00000550103 OXER1Q8TDS5 423 aa10.9□□□□□ -0.66
EFCAB11-203ENST00000550103 GALR2O43603 387 aaPredicted RBP10.89□□□□□ -0.67
EFCAB11-203ENST00000550103 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
EFCAB11-203ENST00000550103 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
EFCAB11-203ENST00000550103 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
EFCAB11-203ENST00000550103 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.67
EFCAB11-203ENST00000550103 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
EFCAB11-203ENST00000550103 TTLL12Q14166 644 aaPredicted RBP10.86□□□□□ -0.67
EFCAB11-203ENST00000550103 DDX12PQ92771 950 aa10.86□□□□□ -0.67
EFCAB11-203ENST00000550103 PTGDRQ13258 359 aa10.85□□□□□ -0.67
EFCAB11-203ENST00000550103 NUP160Q12769 1436 aa10.84□□□□□ -0.67
EFCAB11-203ENST00000550103 FECHP22830 423 aa10.84□□□□□ -0.67
EFCAB11-203ENST00000550103 ERCC6L2Q5T890 1561 aa10.84□□□□□ -0.67
EFCAB11-203ENST00000550103 PLCG2P16885 1265 aa10.83□□□□□ -0.68
EFCAB11-203ENST00000550103 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
EFCAB11-203ENST00000550103 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
EFCAB11-203ENST00000550103 ATMINO43313 823 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-203ENST00000550103 EVI5O60447 810 aa10.82□□□□□ -0.68
EFCAB11-203ENST00000550103 ASTLQ6HA08 431 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-203ENST00000550103 PCMTD1Q96MG8 357 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-203ENST00000550103 GIGYF2Q6Y7W6 1299 aaKnown RBP10.8□□□□□ -0.68
EFCAB11-203ENST00000550103 ONECUT3O60422 494 aaPredicted RBP10.79□□□□□ -0.68
EFCAB11-203ENST00000550103 PODXL2Q9NZ53 605 aa10.79□□□□□ -0.68
EFCAB11-203ENST00000550103 A6NJR5 290 aa10.78□□□□□ -0.68
EFCAB11-203ENST00000550103 IGF1RP08069 1367 aa10.77□□□□□ -0.68
EFCAB11-203ENST00000550103 RAPGEF2Q9Y4G8 1499 aa10.77□□□□□ -0.69
EFCAB11-203ENST00000550103 PTCD2Q8WV60 388 aaKnown RBP10.77□□□□□ -0.69
EFCAB11-203ENST00000550103 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.69
EFCAB11-203ENST00000550103 APBB1O00213 710 aa10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 MS4A1P11836 297 aa10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 CLCN1P35523 988 aa10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 TMEM92Q6UXU6 159 aa10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 C1orf115Q9H7X2 142 aa10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 KIF21BO75037 1637 aa10.76□□□□□ -0.69
EFCAB11-203ENST00000550103 PRIM1P49642 420 aaKnown RBP10.75□□□□□ -0.69
EFCAB11-203ENST00000550103 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
EFCAB11-203ENST00000550103 EPAS1Q99814 870 aa10.75□□□□□ -0.69
EFCAB11-203ENST00000550103 ARID3AQ99856 593 aa10.75□□□□□ -0.69
EFCAB11-203ENST00000550103 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
EFCAB11-203ENST00000550103 KIAA0556O60303 1618 aa10.73□□□□□ -0.69
EFCAB11-203ENST00000550103 PHF14O94880 888 aa10.73□□□□□ -0.69
EFCAB11-203ENST00000550103 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
EFCAB11-203ENST00000550103 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
EFCAB11-203ENST00000550103 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
EFCAB11-203ENST00000550103 SLC34A2O95436 690 aa10.72□□□□□ -0.69
EFCAB11-203ENST00000550103 EN1Q05925 392 aaPredicted RBP10.72□□□□□ -0.69
EFCAB11-203ENST00000550103 PRG4Q92954 1404 aaPredicted RBP10.71□□□□□ -0.69
EFCAB11-203ENST00000550103 REPIN1Q9BWE0 567 aaKnown RBP10.71□□□□□ -0.69
EFCAB11-203ENST00000550103 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
EFCAB11-203ENST00000550103 PRXQ9BXM0 1461 aa10.7□□□□□ -0.7
EFCAB11-203ENST00000550103 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms