RNA–Protein interactions for RNA: ENST00000548878.6

ARPC3-208, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 532 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-208ENST00000548878 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
ARPC3-208ENST00000548878 DPYSL4O14531 572 aa11.9□□□□□ -0.5
ARPC3-208ENST00000548878 PTPN5P54829 565 aa11.9□□□□□ -0.5
ARPC3-208ENST00000548878 WNT2BQ93097 391 aa11.9□□□□□ -0.5
ARPC3-208ENST00000548878 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
ARPC3-208ENST00000548878 COL9A1P20849 921 aa11.87□□□□□ -0.51
ARPC3-208ENST00000548878 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
ARPC3-208ENST00000548878 C6orf132Q5T0Z8 1188 aa11.85□□□□□ -0.51
ARPC3-208ENST00000548878 LAPTM4BQ86VI4 370 aa11.85□□□□□ -0.51
ARPC3-208ENST00000548878 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
ARPC3-208ENST00000548878 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
ARPC3-208ENST00000548878 PDIA6Q15084 440 aa11.81□□□□□ -0.52
ARPC3-208ENST00000548878 ANKK1Q8NFD2 765 aa11.81□□□□□ -0.52
ARPC3-208ENST00000548878 DDX12PQ92771 950 aa11.79□□□□□ -0.52
ARPC3-208ENST00000548878 KIAA1468Q9P260 1216 aa11.79□□□□□ -0.52
ARPC3-208ENST00000548878 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
ARPC3-208ENST00000548878 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
ARPC3-208ENST00000548878 E2F4Q16254 413 aa11.77□□□□□ -0.53
ARPC3-208ENST00000548878 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
ARPC3-208ENST00000548878 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
ARPC3-208ENST00000548878 RGS20O76081 388 aa11.75□□□□□ -0.53
ARPC3-208ENST00000548878 EN1Q05925 392 aaPredicted RBP11.75□□□□□ -0.53
ARPC3-208ENST00000548878 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
ARPC3-208ENST00000548878 WDR70Q9NW82 654 aa11.75□□□□□ -0.53
ARPC3-208ENST00000548878 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
ARPC3-208ENST00000548878 NYAP1Q6ZVC0 841 aa11.74□□□□□ -0.53
ARPC3-208ENST00000548878 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
ARPC3-208ENST00000548878 NBR1Q14596 966 aa11.73□□□□□ -0.53
ARPC3-208ENST00000548878 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
ARPC3-208ENST00000548878 MAP3K7O43318 606 aa11.71□□□□□ -0.53
ARPC3-208ENST00000548878 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
ARPC3-208ENST00000548878 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
ARPC3-208ENST00000548878 BCAMP50895 628 aa11.69□□□□□ -0.54
ARPC3-208ENST00000548878 A0A0G2JS52 829 aa11.68□□□□□ -0.54
ARPC3-208ENST00000548878 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
ARPC3-208ENST00000548878 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
ARPC3-208ENST00000548878 SEPT9Q9UHD8 586 aaPredicted RBP11.68□□□□□ -0.54
ARPC3-208ENST00000548878 TSR1Q2NL82 804 aaKnown RBP11.67□□□□□ -0.54
ARPC3-208ENST00000548878 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.64□□□□□ -0.55
ARPC3-208ENST00000548878 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
ARPC3-208ENST00000548878 PRSS12P56730 875 aa11.63□□□□□ -0.55
ARPC3-208ENST00000548878 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
ARPC3-208ENST00000548878 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
ARPC3-208ENST00000548878 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
ARPC3-208ENST00000548878 GRXCR2A6NFK2 248 aa11.62□□□□□ -0.55
ARPC3-208ENST00000548878 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
ARPC3-208ENST00000548878 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
ARPC3-208ENST00000548878 OSBPP22059 807 aa11.58□□□□□ -0.56
ARPC3-208ENST00000548878 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
ARPC3-208ENST00000548878 KCNC4Q03721 635 aa11.57□□□□□ -0.56
ARPC3-208ENST00000548878 RBM27Q9P2N5 1060 aaKnown RBP11.57□□□□□ -0.56
ARPC3-208ENST00000548878 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
ARPC3-208ENST00000548878 FAM198AQ9UFP1 575 aa11.55□□□□□ -0.56
ARPC3-208ENST00000548878 PPP4CP60510 307 aa11.54□□□□□ -0.56
ARPC3-208ENST00000548878 TATDN2Q93075 761 aa11.54□□□□□ -0.56
ARPC3-208ENST00000548878 SMAPO00193 183 aa11.51□□□□□ -0.57
ARPC3-208ENST00000548878 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
ARPC3-208ENST00000548878 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
ARPC3-208ENST00000548878 IRX2Q9BZI1 471 aaPredicted RBP11.51□□□□□ -0.57
ARPC3-208ENST00000548878 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
ARPC3-208ENST00000548878 CDHR5Q9HBB8 845 aa11.5□□□□□ -0.57
ARPC3-208ENST00000548878 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
ARPC3-208ENST00000548878 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
ARPC3-208ENST00000548878 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
ARPC3-208ENST00000548878 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
ARPC3-208ENST00000548878 NPDC1Q9NQX5 325 aaPredicted RBP11.47□□□□□ -0.57
ARPC3-208ENST00000548878 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
ARPC3-208ENST00000548878 NECTIN2Q92692 538 aa11.45□□□□□ -0.58
ARPC3-208ENST00000548878 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
ARPC3-208ENST00000548878 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
ARPC3-208ENST00000548878 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
ARPC3-208ENST00000548878 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
ARPC3-208ENST00000548878 SLF2Q8IX21 1173 aa11.38□□□□□ -0.59
ARPC3-208ENST00000548878 MTRQ99707 1265 aa11.38□□□□□ -0.59
ARPC3-208ENST00000548878 MLLT3P42568 568 aaPredicted RBP11.37□□□□□ -0.59
ARPC3-208ENST00000548878 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
ARPC3-208ENST00000548878 EYA1Q99502 592 aa11.37□□□□□ -0.59
ARPC3-208ENST00000548878 RNF40O75150 1001 aa11.35□□□□□ -0.59
ARPC3-208ENST00000548878 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
ARPC3-208ENST00000548878 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
ARPC3-208ENST00000548878 APLP1P51693 650 aa11.34□□□□□ -0.59
ARPC3-208ENST00000548878 PTGDRQ13258 359 aa11.33□□□□□ -0.6
ARPC3-208ENST00000548878 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
ARPC3-208ENST00000548878 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
ARPC3-208ENST00000548878 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
ARPC3-208ENST00000548878 DNAJB2P25686 324 aa11.28□□□□□ -0.6
ARPC3-208ENST00000548878 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
ARPC3-208ENST00000548878 ZNF516Q92618 1163 aa11.28□□□□□ -0.6
ARPC3-208ENST00000548878 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.27□□□□□ -0.61
ARPC3-208ENST00000548878 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
ARPC3-208ENST00000548878 ADGRG1Q9Y653 693 aa11.26□□□□□ -0.61
ARPC3-208ENST00000548878 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
ARPC3-208ENST00000548878 PRKD2Q9BZL6 878 aa11.25□□□□□ -0.61
ARPC3-208ENST00000548878 FCHSD2O94868 740 aa11.24□□□□□ -0.61
ARPC3-208ENST00000548878 GGCXP38435 758 aa11.24□□□□□ -0.61
ARPC3-208ENST00000548878 Q6ZNB5 142 aa11.24□□□□□ -0.61
ARPC3-208ENST00000548878 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
ARPC3-208ENST00000548878 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
ARPC3-208ENST00000548878 ZPR1O75312 459 aa11.22□□□□□ -0.61
ARPC3-208ENST00000548878 COPS2P61201 443 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms