RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
BRF1-211ENST00000547530 SPATA31E1Q6ZUB1 1445 aa19.65■□□□□ 0.74
BRF1-211ENST00000547530 SEC24BO95487 1268 aa19.64■□□□□ 0.74
BRF1-211ENST00000547530 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
BRF1-211ENST00000547530 THOC2Q8NI27 1593 aaKnown RBP19.64■□□□□ 0.73
BRF1-211ENST00000547530 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
BRF1-211ENST00000547530 NAP1L5Q96NT1 182 aaPredicted RBP19.63■□□□□ 0.73
BRF1-211ENST00000547530 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
BRF1-211ENST00000547530 ANKRD30AQ9BXX3 1397 aa19.63■□□□□ 0.73
BRF1-211ENST00000547530 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
BRF1-211ENST00000547530 GRIN2BQ13224 1484 aa19.63■□□□□ 0.73
BRF1-211ENST00000547530 PDE3BQ13370 1112 aa19.62■□□□□ 0.73
BRF1-211ENST00000547530 ANKRD50Q9ULJ7 1429 aa19.61■□□□□ 0.73
BRF1-211ENST00000547530 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
BRF1-211ENST00000547530 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
BRF1-211ENST00000547530 PRDM2Q13029 1718 aa19.61■□□□□ 0.73
BRF1-211ENST00000547530 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
BRF1-211ENST00000547530 IGHDP01880 384 aa19.59■□□□□ 0.73
BRF1-211ENST00000547530 TEX14Q8IWB6 1497 aa19.59■□□□□ 0.73
BRF1-211ENST00000547530 KIAA1107Q9UPP5 1409 aa19.58■□□□□ 0.73
BRF1-211ENST00000547530 TNNQ9UQP3 1299 aa19.58■□□□□ 0.73
BRF1-211ENST00000547530 SAFB2Q14151 953 aaKnown RBP eCLIP19.58■□□□□ 0.73
BRF1-211ENST00000547530 UGGT2Q9NYU1 1516 aa19.58■□□□□ 0.72
BRF1-211ENST00000547530 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
BRF1-211ENST00000547530 C8orf34Q49A92 452 aa19.56■□□□□ 0.72
BRF1-211ENST00000547530 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
BRF1-211ENST00000547530 ZBTB7CA1YPR0 619 aa19.56■□□□□ 0.72
BRF1-211ENST00000547530 DISP3Q9P2K9 1392 aa19.55■□□□□ 0.72
BRF1-211ENST00000547530 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
BRF1-211ENST00000547530 MFAP1P55081 439 aaKnown RBP19.55■□□□□ 0.72
BRF1-211ENST00000547530 UPF2Q9HAU5 1272 aaKnown RBP19.55■□□□□ 0.72
BRF1-211ENST00000547530 ARID3AQ99856 593 aa19.53■□□□□ 0.72
BRF1-211ENST00000547530 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
BRF1-211ENST00000547530 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.72
BRF1-211ENST00000547530 URB2Q14146 1524 aaKnown RBP19.52■□□□□ 0.72
BRF1-211ENST00000547530 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
BRF1-211ENST00000547530 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
BRF1-211ENST00000547530 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
BRF1-211ENST00000547530 BECN1Q14457 450 aa19.51■□□□□ 0.71
BRF1-211ENST00000547530 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
BRF1-211ENST00000547530 HSP90AA1P07900 732 aaKnown RBP19.5■□□□□ 0.71
BRF1-211ENST00000547530 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
BRF1-211ENST00000547530 BCORL1Q5H9F3 1711 aa19.48■□□□□ 0.71
BRF1-211ENST00000547530 PZPP20742 1482 aa19.48■□□□□ 0.71
BRF1-211ENST00000547530 PLB1Q6P1J6 1458 aa19.47■□□□□ 0.71
BRF1-211ENST00000547530 LRPPRCP42704 1394 aaKnown RBP19.47■□□□□ 0.71
BRF1-211ENST00000547530 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
BRF1-211ENST00000547530 PANK2Q9BZ23 570 aa19.46■□□□□ 0.71
BRF1-211ENST00000547530 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
BRF1-211ENST00000547530 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
BRF1-211ENST00000547530 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
BRF1-211ENST00000547530 FTSJ3Q8IY81 847 aaKnown RBP19.43■□□□□ 0.7
BRF1-211ENST00000547530 TESK2Q96S53 571 aa19.41■□□□□ 0.7
BRF1-211ENST00000547530 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
BRF1-211ENST00000547530 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
BRF1-211ENST00000547530 SLFN5Q08AF3 891 aa19.4■□□□□ 0.7
BRF1-211ENST00000547530 TRAK1Q9UPV9 953 aa19.4■□□□□ 0.7
BRF1-211ENST00000547530 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
BRF1-211ENST00000547530 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
BRF1-211ENST00000547530 RRAGDQ9NQL2 400 aaPredicted RBP19.39■□□□□ 0.69
BRF1-211ENST00000547530 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.69
BRF1-211ENST00000547530 CFAP70Q5T0N1 1121 aa19.38■□□□□ 0.69
BRF1-211ENST00000547530 U2AF1L5P0DN76 240 aaPredicted RBP19.38■□□□□ 0.69
BRF1-211ENST00000547530 U2AF1Q01081 240 aaKnown RBP eCLIP19.38■□□□□ 0.69
BRF1-211ENST00000547530 PDZRN3Q9UPQ7 1066 aa19.38■□□□□ 0.69
BRF1-211ENST00000547530 VSIG10Q8N0Z9 540 aa19.37■□□□□ 0.69
BRF1-211ENST00000547530 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
BRF1-211ENST00000547530 HECW1Q76N89 1606 aa19.37■□□□□ 0.69
BRF1-211ENST00000547530 KDM2BQ8NHM5 1336 aa19.37■□□□□ 0.69
BRF1-211ENST00000547530 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
BRF1-211ENST00000547530 PARD3Q8TEW0 1356 aa19.36■□□□□ 0.69
BRF1-211ENST00000547530 C9orf84Q5VXU9 1444 aa19.36■□□□□ 0.69
BRF1-211ENST00000547530 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
BRF1-211ENST00000547530 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
BRF1-211ENST00000547530 GOLGA6L3A6NEY3 463 aa19.36■□□□□ 0.69
BRF1-211ENST00000547530 PNNQ9H307 717 aaKnown RBP19.36■□□□□ 0.69
BRF1-211ENST00000547530 APBB1O00213 710 aa19.35■□□□□ 0.69
BRF1-211ENST00000547530 CTTNBP2Q8WZ74 1663 aa19.35■□□□□ 0.69
BRF1-211ENST00000547530 RLBP1P12271 317 aa19.35■□□□□ 0.69
BRF1-211ENST00000547530 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
BRF1-211ENST00000547530 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
BRF1-211ENST00000547530 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
BRF1-211ENST00000547530 TMEM132EQ6IEE7 984 aa19.33■□□□□ 0.69
BRF1-211ENST00000547530 TBC1D2Q9BYX2 928 aa19.32■□□□□ 0.68
BRF1-211ENST00000547530 ERBINQ96RT1 1412 aa19.32■□□□□ 0.68
BRF1-211ENST00000547530 SLC12A5Q9H2X9 1139 aa19.32■□□□□ 0.68
BRF1-211ENST00000547530 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
BRF1-211ENST00000547530 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
BRF1-211ENST00000547530 STK26Q9P289 416 aa19.31■□□□□ 0.68
BRF1-211ENST00000547530 E9PSI1 815 aa19.3■□□□□ 0.68
BRF1-211ENST00000547530 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
BRF1-211ENST00000547530 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
BRF1-211ENST00000547530 CUL7Q14999 1698 aa19.3■□□□□ 0.68
BRF1-211ENST00000547530 TROQ12816 1431 aaPredicted RBP19.3■□□□□ 0.68
BRF1-211ENST00000547530 AFAP1Q8N556 730 aa19.3■□□□□ 0.68
BRF1-211ENST00000547530 FOXD4L5Q5VV16 416 aaPredicted RBP19.29■□□□□ 0.68
BRF1-211ENST00000547530 FOXD4L4Q8WXT5 416 aaPredicted RBP19.29■□□□□ 0.68
BRF1-211ENST00000547530 TRIM44Q96DX7 344 aaPredicted RBP19.29■□□□□ 0.68
BRF1-211ENST00000547530 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
BRF1-211ENST00000547530 LNPKQ9C0E8 428 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms