RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
CACNB3-204ENST00000547230 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
CACNB3-204ENST00000547230 ABCC10Q5T3U5 1492 aa16.96■□□□□ 0.3
CACNB3-204ENST00000547230 PTPRGP23470 1445 aa16.95■□□□□ 0.3
CACNB3-204ENST00000547230 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
CACNB3-204ENST00000547230 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
CACNB3-204ENST00000547230 TRPM1Q7Z4N2 1603 aa16.93■□□□□ 0.3
CACNB3-204ENST00000547230 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
CACNB3-204ENST00000547230 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
CACNB3-204ENST00000547230 ABCA8O94911 1581 aa16.91■□□□□ 0.3
CACNB3-204ENST00000547230 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
CACNB3-204ENST00000547230 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
CACNB3-204ENST00000547230 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
CACNB3-204ENST00000547230 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
CACNB3-204ENST00000547230 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.3
CACNB3-204ENST00000547230 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.29
CACNB3-204ENST00000547230 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
CACNB3-204ENST00000547230 PRAG1Q86YV5 1406 aa16.88■□□□□ 0.29
CACNB3-204ENST00000547230 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
CACNB3-204ENST00000547230 FAM135AQ9P2D6 1515 aa16.88■□□□□ 0.29
CACNB3-204ENST00000547230 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 PDE4AP27815 886 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 ATP10BO94823 1461 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-204ENST00000547230 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
CACNB3-204ENST00000547230 HNRNPMP52272 730 aaKnown RBP eCLIP16.86■□□□□ 0.29
CACNB3-204ENST00000547230 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-204ENST00000547230 COL17A1Q9UMD9 1497 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-204ENST00000547230 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
CACNB3-204ENST00000547230 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
CACNB3-204ENST00000547230 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-204ENST00000547230 NUP160Q12769 1436 aa16.84■□□□□ 0.29
CACNB3-204ENST00000547230 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
CACNB3-204ENST00000547230 SAMD9LQ8IVG5 1584 aa16.83■□□□□ 0.28
CACNB3-204ENST00000547230 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.28
CACNB3-204ENST00000547230 MS4A1P11836 297 aa16.82■□□□□ 0.28
CACNB3-204ENST00000547230 LAMC1P11047 1609 aa16.82■□□□□ 0.28
CACNB3-204ENST00000547230 GPRASP1Q5JY77 1395 aa16.82■□□□□ 0.28
CACNB3-204ENST00000547230 FBLN2P98095 1184 aa16.82■□□□□ 0.28
CACNB3-204ENST00000547230 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CACNB3-204ENST00000547230 DISP3Q9P2K9 1392 aa16.82■□□□□ 0.28
CACNB3-204ENST00000547230 PLIN1O60240 522 aa16.81■□□□□ 0.28
CACNB3-204ENST00000547230 A2MP01023 1474 aa16.81■□□□□ 0.28
CACNB3-204ENST00000547230 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
CACNB3-204ENST00000547230 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
CACNB3-204ENST00000547230 CDC42BPBQ9Y5S2 1711 aa16.81■□□□□ 0.28
CACNB3-204ENST00000547230 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
CACNB3-204ENST00000547230 PLA2R1Q13018 1463 aa16.8■□□□□ 0.28
CACNB3-204ENST00000547230 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
CACNB3-204ENST00000547230 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
CACNB3-204ENST00000547230 PREX2Q70Z35 1606 aa16.79■□□□□ 0.28
CACNB3-204ENST00000547230 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
CACNB3-204ENST00000547230 INSRP06213 1382 aa16.79■□□□□ 0.28
CACNB3-204ENST00000547230 UNC13BO14795 1591 aa16.78■□□□□ 0.28
CACNB3-204ENST00000547230 SKAP1Q86WV1 359 aa16.78■□□□□ 0.28
CACNB3-204ENST00000547230 TESK2Q96S53 571 aa16.78■□□□□ 0.28
CACNB3-204ENST00000547230 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
CACNB3-204ENST00000547230 ERBINQ96RT1 1412 aa16.76■□□□□ 0.27
CACNB3-204ENST00000547230 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
CACNB3-204ENST00000547230 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
CACNB3-204ENST00000547230 PANK3Q9H999 370 aa16.75■□□□□ 0.27
CACNB3-204ENST00000547230 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
CACNB3-204ENST00000547230 NEFMP07197 916 aa16.74■□□□□ 0.27
CACNB3-204ENST00000547230 SYCP2Q9BX26 1530 aa16.74■□□□□ 0.27
CACNB3-204ENST00000547230 MAST1Q9Y2H9 1570 aa16.72■□□□□ 0.27
CACNB3-204ENST00000547230 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
CACNB3-204ENST00000547230 RNF17Q9BXT8 1623 aaKnown RBP16.72■□□□□ 0.27
CACNB3-204ENST00000547230 C20orf194Q5TEA3 1177 aa16.72■□□□□ 0.27
CACNB3-204ENST00000547230 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
CACNB3-204ENST00000547230 USP35Q9P2H5 1018 aa16.71■□□□□ 0.26
CACNB3-204ENST00000547230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNB3-204ENST00000547230 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
CACNB3-204ENST00000547230 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
CACNB3-204ENST00000547230 TMF1P82094 1093 aa16.69■□□□□ 0.26
CACNB3-204ENST00000547230 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
CACNB3-204ENST00000547230 TTC37Q6PGP7 1564 aa16.68■□□□□ 0.26
CACNB3-204ENST00000547230 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
CACNB3-204ENST00000547230 RSPH4AQ5TD94 716 aa16.67■□□□□ 0.26
CACNB3-204ENST00000547230 IL27Q8NEV9 243 aa16.67■□□□□ 0.26
CACNB3-204ENST00000547230 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
CACNB3-204ENST00000547230 MAGI2Q86UL8 1455 aa16.66■□□□□ 0.26
CACNB3-204ENST00000547230 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
CACNB3-204ENST00000547230 WDR7Q9Y4E6 1490 aa16.66■□□□□ 0.26
CACNB3-204ENST00000547230 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
CACNB3-204ENST00000547230 ATP10AO60312 1499 aa16.65■□□□□ 0.26
CACNB3-204ENST00000547230 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
CACNB3-204ENST00000547230 IQGAP1P46940 1657 aa16.63■□□□□ 0.25
CACNB3-204ENST00000547230 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
CACNB3-204ENST00000547230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.62■□□□□ 0.25
CACNB3-204ENST00000547230 MADDQ8WXG6 1647 aa16.62■□□□□ 0.25
CACNB3-204ENST00000547230 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-204ENST00000547230 ZNF521Q96K83 1311 aa16.61■□□□□ 0.25
CACNB3-204ENST00000547230 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
CACNB3-204ENST00000547230 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
CACNB3-204ENST00000547230 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
CACNB3-204ENST00000547230 SLC4A3P48751 1232 aa16.59■□□□□ 0.25
CACNB3-204ENST00000547230 SYNMO15061 1565 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms