RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
SCAF11-209ENST00000547018 ADGRL2O95490 1459 aa17.39■□□□□ 0.37
SCAF11-209ENST00000547018 ARHGEF12Q9NZN5 1544 aa17.39■□□□□ 0.37
SCAF11-209ENST00000547018 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
SCAF11-209ENST00000547018 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
SCAF11-209ENST00000547018 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
SCAF11-209ENST00000547018 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
SCAF11-209ENST00000547018 PLCH2O75038 1416 aa17.34■□□□□ 0.37
SCAF11-209ENST00000547018 FAM135AQ9P2D6 1515 aa17.33■□□□□ 0.37
SCAF11-209ENST00000547018 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
SCAF11-209ENST00000547018 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
SCAF11-209ENST00000547018 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
SCAF11-209ENST00000547018 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
SCAF11-209ENST00000547018 SPATA31E1Q6ZUB1 1445 aa17.28■□□□□ 0.36
SCAF11-209ENST00000547018 ASXL2Q76L83 1435 aa17.28■□□□□ 0.36
SCAF11-209ENST00000547018 FANCAO15360 1455 aa17.28■□□□□ 0.36
SCAF11-209ENST00000547018 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.35
SCAF11-209ENST00000547018 PANK3Q9H999 370 aa17.27■□□□□ 0.35
SCAF11-209ENST00000547018 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
SCAF11-209ENST00000547018 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCAF11-209ENST00000547018 MLECQ14165 292 aa17.26■□□□□ 0.35
SCAF11-209ENST00000547018 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
SCAF11-209ENST00000547018 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
SCAF11-209ENST00000547018 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
SCAF11-209ENST00000547018 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
SCAF11-209ENST00000547018 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
SCAF11-209ENST00000547018 WDR7Q9Y4E6 1490 aa17.23■□□□□ 0.35
SCAF11-209ENST00000547018 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
SCAF11-209ENST00000547018 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
SCAF11-209ENST00000547018 KANK1Q14678 1352 aa17.22■□□□□ 0.35
SCAF11-209ENST00000547018 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
SCAF11-209ENST00000547018 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
SCAF11-209ENST00000547018 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
SCAF11-209ENST00000547018 TMF1P82094 1093 aa17.2■□□□□ 0.34
SCAF11-209ENST00000547018 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
SCAF11-209ENST00000547018 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
SCAF11-209ENST00000547018 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
SCAF11-209ENST00000547018 DISP3Q9P2K9 1392 aa17.18■□□□□ 0.34
SCAF11-209ENST00000547018 A2MP01023 1474 aa17.18■□□□□ 0.34
SCAF11-209ENST00000547018 DHX29Q7Z478 1369 aaKnown RBP17.17■□□□□ 0.34
SCAF11-209ENST00000547018 CD109Q6YHK3 1445 aa17.17■□□□□ 0.34
SCAF11-209ENST00000547018 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
SCAF11-209ENST00000547018 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
SCAF11-209ENST00000547018 FAM69CQ0P6D2 419 aa17.16■□□□□ 0.34
SCAF11-209ENST00000547018 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
SCAF11-209ENST00000547018 STK26Q9P289 416 aa17.16■□□□□ 0.34
SCAF11-209ENST00000547018 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
SCAF11-209ENST00000547018 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
SCAF11-209ENST00000547018 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
SCAF11-209ENST00000547018 TESK2Q96S53 571 aa17.14■□□□□ 0.33
SCAF11-209ENST00000547018 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
SCAF11-209ENST00000547018 ABCC1P33527 1531 aa17.12■□□□□ 0.33
SCAF11-209ENST00000547018 UGGT1Q9NYU2 1555 aa17.11■□□□□ 0.33
SCAF11-209ENST00000547018 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
SCAF11-209ENST00000547018 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
SCAF11-209ENST00000547018 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
SCAF11-209ENST00000547018 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
SCAF11-209ENST00000547018 KDM5CP41229 1560 aa17.09■□□□□ 0.33
SCAF11-209ENST00000547018 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
SCAF11-209ENST00000547018 ZBED9Q6R2W3 1325 aa17.09■□□□□ 0.33
SCAF11-209ENST00000547018 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
SCAF11-209ENST00000547018 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
SCAF11-209ENST00000547018 RALBP1Q15311 655 aa17.06■□□□□ 0.32
SCAF11-209ENST00000547018 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
SCAF11-209ENST00000547018 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
SCAF11-209ENST00000547018 ATP7AQ04656 1500 aa17.05■□□□□ 0.32
SCAF11-209ENST00000547018 KDM5DQ9BY66 1539 aa17.05■□□□□ 0.32
SCAF11-209ENST00000547018 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
SCAF11-209ENST00000547018 PER1O15534 1290 aaPredicted RBP17.04■□□□□ 0.32
SCAF11-209ENST00000547018 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
SCAF11-209ENST00000547018 ATP10AO60312 1499 aa17.02■□□□□ 0.32
SCAF11-209ENST00000547018 ZFYVE16Q7Z3T8 1539 aa17.02■□□□□ 0.32
SCAF11-209ENST00000547018 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.32
SCAF11-209ENST00000547018 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
SCAF11-209ENST00000547018 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.31
SCAF11-209ENST00000547018 PLIN1O60240 522 aa17.01■□□□□ 0.31
SCAF11-209ENST00000547018 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
SCAF11-209ENST00000547018 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
SCAF11-209ENST00000547018 NUDCQ9Y266 331 aa17■□□□□ 0.31
SCAF11-209ENST00000547018 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
SCAF11-209ENST00000547018 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
SCAF11-209ENST00000547018 IDI1Q13907 227 aa16.98■□□□□ 0.31
SCAF11-209ENST00000547018 CCDC136Q96JN2 1154 aa16.98■□□□□ 0.31
SCAF11-209ENST00000547018 NOS1P29475 1434 aa16.98■□□□□ 0.31
SCAF11-209ENST00000547018 UNC13BO14795 1591 aa16.98■□□□□ 0.31
SCAF11-209ENST00000547018 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
SCAF11-209ENST00000547018 PPP4R2Q9NY27 417 aa16.96■□□□□ 0.31
SCAF11-209ENST00000547018 E9PCH4 1651 aa16.95■□□□□ 0.3
SCAF11-209ENST00000547018 ZNF518AQ6AHZ1 1483 aa16.95■□□□□ 0.3
SCAF11-209ENST00000547018 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
SCAF11-209ENST00000547018 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
SCAF11-209ENST00000547018 RBM19Q9Y4C8 960 aaKnown RBP16.95■□□□□ 0.3
SCAF11-209ENST00000547018 PRKCSHP14314 528 aaPredicted RBP16.94■□□□□ 0.3
SCAF11-209ENST00000547018 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
SCAF11-209ENST00000547018 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
SCAF11-209ENST00000547018 ESF1Q9H501 851 aaKnown RBP16.93■□□□□ 0.3
SCAF11-209ENST00000547018 MINK1Q8N4C8 1332 aaPredicted RBP16.93■□□□□ 0.3
SCAF11-209ENST00000547018 YEATS2Q9ULM3 1422 aa16.93■□□□□ 0.3
SCAF11-209ENST00000547018 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-209ENST00000547018 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms