RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 GPATCH8Q9UKJ3 1502 aaKnown RBP10.57□□□□□ -0.72
UBR1-202ENST00000546274 KDM5CP41229 1560 aa10.57□□□□□ -0.72
UBR1-202ENST00000546274 PLB1Q6P1J6 1458 aa10.56□□□□□ -0.72
UBR1-202ENST00000546274 PDE4CQ08493 712 aa10.56□□□□□ -0.72
UBR1-202ENST00000546274 GSE1Q14687 1217 aa10.55□□□□□ -0.72
UBR1-202ENST00000546274 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
UBR1-202ENST00000546274 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
UBR1-202ENST00000546274 DHX29Q7Z478 1369 aaKnown RBP10.54□□□□□ -0.72
UBR1-202ENST00000546274 KIAA1107Q9UPP5 1409 aa10.53□□□□□ -0.72
UBR1-202ENST00000546274 ZBED9Q6R2W3 1325 aa10.53□□□□□ -0.72
UBR1-202ENST00000546274 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
UBR1-202ENST00000546274 PTPRGP23470 1445 aa10.53□□□□□ -0.72
UBR1-202ENST00000546274 UHRF1BP1LA0JNW5 1464 aa10.53□□□□□ -0.72
UBR1-202ENST00000546274 FGD1P98174 961 aa10.51□□□□□ -0.73
UBR1-202ENST00000546274 FAM9BQ8IZU0 186 aa10.51□□□□□ -0.73
UBR1-202ENST00000546274 MRS2Q9HD23 443 aa10.51□□□□□ -0.73
UBR1-202ENST00000546274 FRAT1Q92837 279 aaPredicted RBP10.51□□□□□ -0.73
UBR1-202ENST00000546274 AAMPQ13685 434 aa10.5□□□□□ -0.73
UBR1-202ENST00000546274 ABCA8O94911 1581 aa10.5□□□□□ -0.73
UBR1-202ENST00000546274 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
UBR1-202ENST00000546274 KDM5DQ9BY66 1539 aa10.5□□□□□ -0.73
UBR1-202ENST00000546274 FAM43AQ8N2R8 423 aa10.5□□□□□ -0.73
UBR1-202ENST00000546274 E9PCH4 1651 aa10.49□□□□□ -0.73
UBR1-202ENST00000546274 NAP1L5Q96NT1 182 aaPredicted RBP10.49□□□□□ -0.73
UBR1-202ENST00000546274 CFDP1Q9UEE9 299 aaPredicted RBP10.49□□□□□ -0.73
UBR1-202ENST00000546274 ABCC2Q92887 1545 aa10.49□□□□□ -0.73
UBR1-202ENST00000546274 USP47Q96K76 1375 aa10.49□□□□□ -0.73
UBR1-202ENST00000546274 UHRF1BP1Q6BDS2 1440 aa10.49□□□□□ -0.73
UBR1-202ENST00000546274 SHANK2Q9UPX8 1470 aa10.49□□□□□ -0.73
UBR1-202ENST00000546274 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
UBR1-202ENST00000546274 RALGAPBQ86X10 1494 aa10.48□□□□□ -0.73
UBR1-202ENST00000546274 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
UBR1-202ENST00000546274 ANKRD50Q9ULJ7 1429 aa10.47□□□□□ -0.73
UBR1-202ENST00000546274 ARHGEF12Q9NZN5 1544 aa10.47□□□□□ -0.73
UBR1-202ENST00000546274 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
UBR1-202ENST00000546274 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
UBR1-202ENST00000546274 PKD2Q13563 968 aa10.46□□□□□ -0.73
UBR1-202ENST00000546274 SMG6Q86US8 1419 aaKnown RBP10.46□□□□□ -0.74
UBR1-202ENST00000546274 ARID4BQ4LE39 1312 aaPredicted RBP10.45□□□□□ -0.74
UBR1-202ENST00000546274 HSP90AA1P07900 732 aaKnown RBP10.45□□□□□ -0.74
UBR1-202ENST00000546274 C9orf84Q5VXU9 1444 aa10.45□□□□□ -0.74
UBR1-202ENST00000546274 CDC42BPBQ9Y5S2 1711 aa10.45□□□□□ -0.74
UBR1-202ENST00000546274 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
UBR1-202ENST00000546274 ARHGEF5Q12774 1597 aa10.44□□□□□ -0.74
UBR1-202ENST00000546274 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
UBR1-202ENST00000546274 ATP10BO94823 1461 aa10.44□□□□□ -0.74
UBR1-202ENST00000546274 PDIA4P13667 645 aaKnown RBP10.43□□□□□ -0.74
UBR1-202ENST00000546274 RNF123Q5XPI4 1314 aa10.42□□□□□ -0.74
UBR1-202ENST00000546274 TRPM1Q7Z4N2 1603 aa10.42□□□□□ -0.74
UBR1-202ENST00000546274 SAMD9LQ8IVG5 1584 aa10.42□□□□□ -0.74
UBR1-202ENST00000546274 ZCCHC11Q5TAX3 1644 aaKnown RBP10.42□□□□□ -0.74
UBR1-202ENST00000546274 PREX2Q70Z35 1606 aa10.42□□□□□ -0.74
UBR1-202ENST00000546274 RRP9O43818 475 aaKnown RBP10.42□□□□□ -0.74
UBR1-202ENST00000546274 NFKBIBQ15653 356 aa10.41□□□□□ -0.74
UBR1-202ENST00000546274 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
UBR1-202ENST00000546274 RRAGDQ9NQL2 400 aaPredicted RBP10.41□□□□□ -0.74
UBR1-202ENST00000546274 NUP155O75694 1391 aa10.41□□□□□ -0.74
UBR1-202ENST00000546274 KIF13AQ9H1H9 1805 aa10.41□□□□□ -0.74
UBR1-202ENST00000546274 GLI2P10070 1586 aa10.4□□□□□ -0.75
UBR1-202ENST00000546274 DIP2BQ9P265 1576 aa10.4□□□□□ -0.75
UBR1-202ENST00000546274 PNISRQ8TF01 805 aaKnown RBP10.4□□□□□ -0.75
UBR1-202ENST00000546274 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
UBR1-202ENST00000546274 MYO5CQ9NQX4 1742 aa10.39□□□□□ -0.75
UBR1-202ENST00000546274 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
UBR1-202ENST00000546274 FAM135AQ9P2D6 1515 aa10.39□□□□□ -0.75
UBR1-202ENST00000546274 LRPPRCP42704 1394 aaKnown RBP10.39□□□□□ -0.75
UBR1-202ENST00000546274 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
UBR1-202ENST00000546274 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
UBR1-202ENST00000546274 UNC13BO14795 1591 aa10.38□□□□□ -0.75
UBR1-202ENST00000546274 KIF15Q9NS87 1388 aa10.38□□□□□ -0.75
UBR1-202ENST00000546274 ARXQ96QS3 562 aa10.38□□□□□ -0.75
UBR1-202ENST00000546274 RGS3P49796 1198 aa10.37□□□□□ -0.75
UBR1-202ENST00000546274 PLEKHD1A6NEE1 506 aa10.37□□□□□ -0.75
UBR1-202ENST00000546274 CNGB1Q14028 1251 aaPredicted RBP10.37□□□□□ -0.75
UBR1-202ENST00000546274 CARD11Q9BXL7 1154 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
UBR1-202ENST00000546274 LAMC1P11047 1609 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 ASXL2Q76L83 1435 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 POLR3GLQ9BT43 218 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 MAST1Q9Y2H9 1570 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 CCDC141Q6ZP82 1450 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 ST20-MTHFSA0A0A6YYL1 179 aa10.36□□□□□ -0.75
UBR1-202ENST00000546274 TTC37Q6PGP7 1564 aa10.35□□□□□ -0.75
UBR1-202ENST00000546274 HNRNPMP52272 730 aaKnown RBP eCLIP10.35□□□□□ -0.75
UBR1-202ENST00000546274 WDR7Q9Y4E6 1490 aa10.35□□□□□ -0.75
UBR1-202ENST00000546274 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
UBR1-202ENST00000546274 PLPPR3Q6T4P5 718 aa10.34□□□□□ -0.75
UBR1-202ENST00000546274 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
UBR1-202ENST00000546274 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
UBR1-202ENST00000546274 IQGAP3Q86VI3 1631 aa10.34□□□□□ -0.75
UBR1-202ENST00000546274 BRD4O60885 1362 aaPredicted RBP10.34□□□□□ -0.75
UBR1-202ENST00000546274 KTN1Q86UP2 1357 aaKnown RBP10.34□□□□□ -0.75
UBR1-202ENST00000546274 SYCP2Q9BX26 1530 aa10.34□□□□□ -0.75
UBR1-202ENST00000546274 PRDM15P57071 1507 aaPredicted RBP10.33□□□□□ -0.76
UBR1-202ENST00000546274 MYBBP1AQ9BQG0 1328 aaKnown RBP10.33□□□□□ -0.76
UBR1-202ENST00000546274 PLXNC1O60486 1568 aa10.33□□□□□ -0.76
UBR1-202ENST00000546274 KDM2AQ9Y2K7 1162 aa10.33□□□□□ -0.76
UBR1-202ENST00000546274 TSPY4P0CV99 314 aa10.32□□□□□ -0.76
UBR1-202ENST00000546274 TSPY10P0CW01 314 aa10.32□□□□□ -0.76
UBR1-202ENST00000546274 MAP3K4Q9Y6R4 1608 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms