RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 TK2O00142 265 aa8.23□□□□□ -1.09
LRP6-207ENST00000545658 PTPREP23469 700 aa8.23□□□□□ -1.09
LRP6-207ENST00000545658 WDR70Q9NW82 654 aa8.22□□□□□ -1.09
LRP6-207ENST00000545658 PCDHGA10Q9Y5H3 936 aa8.22□□□□□ -1.09
LRP6-207ENST00000545658 STAC3Q96MF2 364 aa8.21□□□□□ -1.1
LRP6-207ENST00000545658 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
LRP6-207ENST00000545658 HRO43593 1189 aa8.19□□□□□ -1.1
LRP6-207ENST00000545658 E2F4Q16254 413 aa8.19□□□□□ -1.1
LRP6-207ENST00000545658 PHF14O94880 888 aa8.18□□□□□ -1.1
LRP6-207ENST00000545658 TYW1BQ6NUM6 668 aa8.18□□□□□ -1.1
LRP6-207ENST00000545658 DDX12PQ92771 950 aa8.18□□□□□ -1.1
LRP6-207ENST00000545658 TSHZ2Q9NRE2 1034 aa8.18□□□□□ -1.1
LRP6-207ENST00000545658 FBXW7Q969H0 707 aa8.16□□□□□ -1.1
LRP6-207ENST00000545658 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
LRP6-207ENST00000545658 ZBED2Q9BTP6 218 aa8.16□□□□□ -1.1
LRP6-207ENST00000545658 KCTD12Q96CX2 325 aaKnown RBP8.15□□□□□ -1.1
LRP6-207ENST00000545658 SLC4A5Q9BY07 1137 aa8.15□□□□□ -1.1
LRP6-207ENST00000545658 COL9A1P20849 921 aa8.14□□□□□ -1.11
LRP6-207ENST00000545658 PDIA6Q15084 440 aa8.14□□□□□ -1.11
LRP6-207ENST00000545658 EPAS1Q99814 870 aa8.14□□□□□ -1.11
LRP6-207ENST00000545658 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
LRP6-207ENST00000545658 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
LRP6-207ENST00000545658 NESP48681 1621 aa8.13□□□□□ -1.11
LRP6-207ENST00000545658 THOC2Q8NI27 1593 aaKnown RBP8.13□□□□□ -1.11
LRP6-207ENST00000545658 PPP1R3GB7ZBB8 358 aa8.12□□□□□ -1.11
LRP6-207ENST00000545658 NBR1Q14596 966 aa8.12□□□□□ -1.11
LRP6-207ENST00000545658 PROX2Q3B8N5 592 aa8.12□□□□□ -1.11
LRP6-207ENST00000545658 HCSTQ9UBK5 93 aa8.12□□□□□ -1.11
LRP6-207ENST00000545658 C6orf132Q5T0Z8 1188 aa8.11□□□□□ -1.11
LRP6-207ENST00000545658 GOLGA8CPA6NN73 597 aa8.1□□□□□ -1.11
LRP6-207ENST00000545658 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
LRP6-207ENST00000545658 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
LRP6-207ENST00000545658 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
LRP6-207ENST00000545658 MAP3K7O43318 606 aa8.09□□□□□ -1.11
LRP6-207ENST00000545658 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
LRP6-207ENST00000545658 NBPF3Q9H094 633 aa8.08□□□□□ -1.12
LRP6-207ENST00000545658 PTPN5P54829 565 aa8.07□□□□□ -1.12
LRP6-207ENST00000545658 EN1Q05925 392 aaPredicted RBP8.07□□□□□ -1.12
LRP6-207ENST00000545658 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
LRP6-207ENST00000545658 WNT2BQ93097 391 aa8.06□□□□□ -1.12
LRP6-207ENST00000545658 KIAA1468Q9P260 1216 aa8.06□□□□□ -1.12
LRP6-207ENST00000545658 RABGEF1Q9UJ41 708 aa8.06□□□□□ -1.12
LRP6-207ENST00000545658 ATAD2BQ9ULI0 1458 aa8.06□□□□□ -1.12
LRP6-207ENST00000545658 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
LRP6-207ENST00000545658 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
LRP6-207ENST00000545658 THSD4Q6ZMP0 1018 aa8.04□□□□□ -1.12
LRP6-207ENST00000545658 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
LRP6-207ENST00000545658 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
LRP6-207ENST00000545658 PLA2G2EQ9NZK7 142 aa8.03□□□□□ -1.12
LRP6-207ENST00000545658 HMGXB3Q12766 1538 aa8.03□□□□□ -1.12
LRP6-207ENST00000545658 KCNV2Q8TDN2 545 aa8.02□□□□□ -1.13
LRP6-207ENST00000545658 SEPT9Q9UHD8 586 aaPredicted RBP8.02□□□□□ -1.13
LRP6-207ENST00000545658 OSBPP22059 807 aa8.01□□□□□ -1.13
LRP6-207ENST00000545658 ARHGEF1Q92888 912 aaKnown RBP8.01□□□□□ -1.13
LRP6-207ENST00000545658 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
LRP6-207ENST00000545658 ANKK1Q8NFD2 765 aa8□□□□□ -1.13
LRP6-207ENST00000545658 LAMC3Q9Y6N6 1575 aa8□□□□□ -1.13
LRP6-207ENST00000545658 LAPTM4BQ86VI4 370 aa7.99□□□□□ -1.13
LRP6-207ENST00000545658 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
LRP6-207ENST00000545658 TSKSQ9UJT2 592 aa7.99□□□□□ -1.13
LRP6-207ENST00000545658 BAZ1AQ9NRL2 1556 aaPredicted RBP7.98□□□□□ -1.13
LRP6-207ENST00000545658 PDS5BQ9NTI5 1447 aa7.98□□□□□ -1.13
LRP6-207ENST00000545658 BCAMP50895 628 aa7.98□□□□□ -1.13
LRP6-207ENST00000545658 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
LRP6-207ENST00000545658 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
LRP6-207ENST00000545658 ZFRQ96KR1 1074 aaKnown RBP7.98□□□□□ -1.13
LRP6-207ENST00000545658 MLLT3P42568 568 aaPredicted RBP7.97□□□□□ -1.13
LRP6-207ENST00000545658 PRSS12P56730 875 aa7.97□□□□□ -1.13
LRP6-207ENST00000545658 KIF21AQ7Z4S6 1674 aa7.97□□□□□ -1.13
LRP6-207ENST00000545658 HAP1P54257 671 aaPredicted RBP7.96□□□□□ -1.14
LRP6-207ENST00000545658 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
LRP6-207ENST00000545658 CERKQ8TCT0 537 aa7.96□□□□□ -1.14
LRP6-207ENST00000545658 SMAPO00193 183 aa7.95□□□□□ -1.14
LRP6-207ENST00000545658 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
LRP6-207ENST00000545658 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
LRP6-207ENST00000545658 SOWAHBA6NEL2 793 aa7.94□□□□□ -1.14
LRP6-207ENST00000545658 P3H3Q8IVL6 736 aa7.94□□□□□ -1.14
LRP6-207ENST00000545658 MRC2Q9UBG0 1479 aa7.94□□□□□ -1.14
LRP6-207ENST00000545658 WDR62O43379 1518 aa7.93□□□□□ -1.14
LRP6-207ENST00000545658 C3orf80F5H4A9 247 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 LRCH3Q96II8 777 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
LRP6-207ENST00000545658 PNMA3Q9UL41 463 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 RIMBP3CA6NJZ7 1639 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 RIMBP3BA6NNM3 1639 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 SMARCA4P51532 1647 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 RIMBP3Q9UFD9 1639 aa7.92□□□□□ -1.14
LRP6-207ENST00000545658 NBPF26B4DH59 902 aa7.91□□□□□ -1.14
LRP6-207ENST00000545658 TATDN2Q93075 761 aa7.91□□□□□ -1.14
LRP6-207ENST00000545658 NPDC1Q9NQX5 325 aaPredicted RBP7.91□□□□□ -1.14
LRP6-207ENST00000545658 WBP1LQ9NX94 342 aa7.91□□□□□ -1.14
LRP6-207ENST00000545658 SEMA3EO15041 775 aa7.9□□□□□ -1.14
LRP6-207ENST00000545658 PADI6Q6TGC4 694 aa7.9□□□□□ -1.14
LRP6-207ENST00000545658 NUDT18Q6ZVK8 323 aa7.9□□□□□ -1.14
LRP6-207ENST00000545658 HPS5Q9UPZ3 1129 aa7.9□□□□□ -1.14
LRP6-207ENST00000545658 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
LRP6-207ENST00000545658 SAMD7Q7Z3H4 446 aa7.88□□□□□ -1.15
LRP6-207ENST00000545658 RBM27Q9P2N5 1060 aaKnown RBP7.88□□□□□ -1.15
LRP6-207ENST00000545658 TSR3Q9UJK0 312 aaKnown RBP7.88□□□□□ -1.15
LRP6-207ENST00000545658 CADPSQ9ULU8 1353 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms