RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
PDZD4-209ENST00000544474 ST20-MTHFSA0A0A6YYL1 179 aa16.62■□□□□ 0.25
PDZD4-209ENST00000544474 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
PDZD4-209ENST00000544474 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
PDZD4-209ENST00000544474 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
PDZD4-209ENST00000544474 DHX29Q7Z478 1369 aaKnown RBP16.61■□□□□ 0.25
PDZD4-209ENST00000544474 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
PDZD4-209ENST00000544474 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
PDZD4-209ENST00000544474 TEX14Q8IWB6 1497 aa16.6■□□□□ 0.25
PDZD4-209ENST00000544474 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
PDZD4-209ENST00000544474 ROCK2O75116 1388 aaKnown RBP16.59■□□□□ 0.25
PDZD4-209ENST00000544474 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
PDZD4-209ENST00000544474 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
PDZD4-209ENST00000544474 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
PDZD4-209ENST00000544474 ABCC5O15440 1437 aa16.58■□□□□ 0.25
PDZD4-209ENST00000544474 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.25
PDZD4-209ENST00000544474 RALBP1Q15311 655 aa16.58■□□□□ 0.24
PDZD4-209ENST00000544474 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
PDZD4-209ENST00000544474 AAMPQ13685 434 aa16.57■□□□□ 0.24
PDZD4-209ENST00000544474 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
PDZD4-209ENST00000544474 PDE4CQ08493 712 aa16.56■□□□□ 0.24
PDZD4-209ENST00000544474 FGD1P98174 961 aa16.56■□□□□ 0.24
PDZD4-209ENST00000544474 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
PDZD4-209ENST00000544474 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
PDZD4-209ENST00000544474 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
PDZD4-209ENST00000544474 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
PDZD4-209ENST00000544474 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
PDZD4-209ENST00000544474 NUP155O75694 1391 aa16.53■□□□□ 0.24
PDZD4-209ENST00000544474 MS4A1P11836 297 aa16.52■□□□□ 0.24
PDZD4-209ENST00000544474 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
PDZD4-209ENST00000544474 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.24
PDZD4-209ENST00000544474 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.23
PDZD4-209ENST00000544474 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.23
PDZD4-209ENST00000544474 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
PDZD4-209ENST00000544474 TSPY4P0CV99 314 aa16.51■□□□□ 0.23
PDZD4-209ENST00000544474 TSPY10P0CW01 314 aa16.51■□□□□ 0.23
PDZD4-209ENST00000544474 PDE3BQ13370 1112 aa16.51■□□□□ 0.23
PDZD4-209ENST00000544474 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
PDZD4-209ENST00000544474 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
PDZD4-209ENST00000544474 ANKRD30AQ9BXX3 1397 aa16.5■□□□□ 0.23
PDZD4-209ENST00000544474 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDZD4-209ENST00000544474 TPRNQ4KMQ1 711 aa16.5■□□□□ 0.23
PDZD4-209ENST00000544474 KTN1Q86UP2 1357 aaKnown RBP16.5■□□□□ 0.23
PDZD4-209ENST00000544474 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
PDZD4-209ENST00000544474 FAM161AQ3B820 660 aa16.48■□□□□ 0.23
PDZD4-209ENST00000544474 IQGAP2Q13576 1575 aa16.48■□□□□ 0.23
PDZD4-209ENST00000544474 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
PDZD4-209ENST00000544474 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
PDZD4-209ENST00000544474 PZPP20742 1482 aa16.45■□□□□ 0.22
PDZD4-209ENST00000544474 SEC24BO95487 1268 aa16.44■□□□□ 0.22
PDZD4-209ENST00000544474 ANKRD50Q9ULJ7 1429 aa16.44■□□□□ 0.22
PDZD4-209ENST00000544474 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
PDZD4-209ENST00000544474 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
PDZD4-209ENST00000544474 BCAR3O75815 825 aa16.43■□□□□ 0.22
PDZD4-209ENST00000544474 CLCN1P35523 988 aa16.43■□□□□ 0.22
PDZD4-209ENST00000544474 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
PDZD4-209ENST00000544474 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
PDZD4-209ENST00000544474 KIF21AQ7Z4S6 1674 aa16.42■□□□□ 0.22
PDZD4-209ENST00000544474 WDR62O43379 1518 aa16.42■□□□□ 0.22
PDZD4-209ENST00000544474 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
PDZD4-209ENST00000544474 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
PDZD4-209ENST00000544474 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
PDZD4-209ENST00000544474 DNMT1P26358 1616 aaKnown RBP16.42■□□□□ 0.22
PDZD4-209ENST00000544474 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
PDZD4-209ENST00000544474 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
PDZD4-209ENST00000544474 BECN1Q14457 450 aa16.41■□□□□ 0.22
PDZD4-209ENST00000544474 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
PDZD4-209ENST00000544474 RRP7AQ9Y3A4 280 aaKnown RBP16.4■□□□□ 0.22
PDZD4-209ENST00000544474 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.22
PDZD4-209ENST00000544474 PANK1Q8TE04 598 aa16.39■□□□□ 0.22
PDZD4-209ENST00000544474 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
PDZD4-209ENST00000544474 NBPF1Q3BBV0 1214 aa16.39■□□□□ 0.21
PDZD4-209ENST00000544474 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.39■□□□□ 0.21
PDZD4-209ENST00000544474 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
PDZD4-209ENST00000544474 PANK3Q9H999 370 aa16.39■□□□□ 0.21
PDZD4-209ENST00000544474 CAMSAP2Q08AD1 1489 aa16.39■□□□□ 0.21
PDZD4-209ENST00000544474 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
PDZD4-209ENST00000544474 POLR1AO95602 1720 aaPredicted RBP16.37■□□□□ 0.21
PDZD4-209ENST00000544474 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
PDZD4-209ENST00000544474 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
PDZD4-209ENST00000544474 C8orf34Q49A92 452 aa16.36■□□□□ 0.21
PDZD4-209ENST00000544474 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
PDZD4-209ENST00000544474 MBD5Q9P267 1494 aa16.35■□□□□ 0.21
PDZD4-209ENST00000544474 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
PDZD4-209ENST00000544474 KDM5CP41229 1560 aa16.35■□□□□ 0.21
PDZD4-209ENST00000544474 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
PDZD4-209ENST00000544474 APAF1O14727 1248 aa16.34■□□□□ 0.21
PDZD4-209ENST00000544474 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
PDZD4-209ENST00000544474 BCL11BQ9C0K0 894 aaPredicted RBP16.34■□□□□ 0.21
PDZD4-209ENST00000544474 KIF14Q15058 1648 aa16.34■□□□□ 0.21
PDZD4-209ENST00000544474 PRDM4Q9UKN5 801 aa16.33■□□□□ 0.21
PDZD4-209ENST00000544474 TMF1P82094 1093 aa16.33■□□□□ 0.2
PDZD4-209ENST00000544474 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
PDZD4-209ENST00000544474 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
PDZD4-209ENST00000544474 IGHDP01880 384 aa16.31■□□□□ 0.2
PDZD4-209ENST00000544474 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
PDZD4-209ENST00000544474 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
PDZD4-209ENST00000544474 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
PDZD4-209ENST00000544474 CENPJQ9HC77 1338 aaPredicted RBP16.3■□□□□ 0.2
PDZD4-209ENST00000544474 TPM2P07951 284 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms