RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 SCAPERQ9BY12 1400 aa5.12□□□□□ -1.59
BRCA2-206ENST00000544455 GGT6Q6P531 493 aa5.12□□□□□ -1.59
BRCA2-206ENST00000544455 PANK3Q9H999 370 aa5.12□□□□□ -1.59
BRCA2-206ENST00000544455 CDC42BPAQ5VT25 1732 aa5.12□□□□□ -1.59
BRCA2-206ENST00000544455 ADCY10Q96PN6 1610 aa5.12□□□□□ -1.59
BRCA2-206ENST00000544455 RBM19Q9Y4C8 960 aaKnown RBP5.11□□□□□ -1.59
BRCA2-206ENST00000544455 ITSN2Q9NZM3 1697 aa5.11□□□□□ -1.59
BRCA2-206ENST00000544455 ABCC2Q92887 1545 aa5.11□□□□□ -1.59
BRCA2-206ENST00000544455 CHD1O14646 1710 aa5.11□□□□□ -1.59
BRCA2-206ENST00000544455 PLCH2O75038 1416 aa5.11□□□□□ -1.59
BRCA2-206ENST00000544455 RAPGEF3O95398 923 aa5.11□□□□□ -1.59
BRCA2-206ENST00000544455 A2MP01023 1474 aa5.11□□□□□ -1.59
BRCA2-206ENST00000544455 CDCA7LQ96GN5 454 aa5.1□□□□□ -1.59
BRCA2-206ENST00000544455 CFAP70Q5T0N1 1121 aa5.1□□□□□ -1.59
BRCA2-206ENST00000544455 SHANK2Q9UPX8 1470 aa5.1□□□□□ -1.59
BRCA2-206ENST00000544455 BCORL1Q5H9F3 1711 aa5.1□□□□□ -1.59
BRCA2-206ENST00000544455 PLIN1O60240 522 aa5.1□□□□□ -1.59
BRCA2-206ENST00000544455 SAFB2Q14151 953 aaKnown RBP eCLIP5.1□□□□□ -1.59
BRCA2-206ENST00000544455 SKAP1Q86WV1 359 aa5.1□□□□□ -1.59
BRCA2-206ENST00000544455 TNNT2P45379 298 aaPredicted RBP5.1□□□□□ -1.59
BRCA2-206ENST00000544455 RSPH4AQ5TD94 716 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 UHRF1BP1Q6BDS2 1440 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 ADGRF5Q8IZF2 1346 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 PNISRQ8TF01 805 aaKnown RBP5.09□□□□□ -1.59
BRCA2-206ENST00000544455 TESK2Q96S53 571 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 RALGAPBQ86X10 1494 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 PRAG1Q86YV5 1406 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 NPM1P06748 294 aaKnown RBP eCLIP5.09□□□□□ -1.59
BRCA2-206ENST00000544455 TMEM132EQ6IEE7 984 aa5.09□□□□□ -1.59
BRCA2-206ENST00000544455 ZBED9Q6R2W3 1325 aa5.09□□□□□ -1.6
BRCA2-206ENST00000544455 CROCC2H7BZ55 1655 aa5.09□□□□□ -1.6
BRCA2-206ENST00000544455 KDM5CP41229 1560 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 MYBBP1AQ9BQG0 1328 aaKnown RBP5.08□□□□□ -1.6
BRCA2-206ENST00000544455 UGGT1Q9NYU2 1555 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 CCDC146Q8IYE0 955 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 PER1O15534 1290 aaPredicted RBP5.08□□□□□ -1.6
BRCA2-206ENST00000544455 CYB5RLQ6IPT4 315 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 FANCAO15360 1455 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 TMF1P82094 1093 aa5.08□□□□□ -1.6
BRCA2-206ENST00000544455 TRAK1Q9UPV9 953 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 ARHGEF5Q12774 1597 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 ASXL2Q76L83 1435 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 ADGBQ8N7X0 1667 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 KDM5DQ9BY66 1539 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 KTN1Q86UP2 1357 aaKnown RBP5.07□□□□□ -1.6
BRCA2-206ENST00000544455 ZCCHC11Q5TAX3 1644 aaKnown RBP5.07□□□□□ -1.6
BRCA2-206ENST00000544455 OSCARQ8IYS5 282 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 EXOC6Q8TAG9 804 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 MSH5O43196 834 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 NUDCQ9Y266 331 aa5.07□□□□□ -1.6
BRCA2-206ENST00000544455 CDC42BPBQ9Y5S2 1711 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 ADGRL1O94910 1474 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 PPP4R2Q9NY27 417 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 ADAMTS8Q9UP79 889 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 WDR7Q9Y4E6 1490 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 ERBINQ96RT1 1412 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 NEUROD2Q15784 382 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 CLASP1Q7Z460 1538 aa5.06□□□□□ -1.6
BRCA2-206ENST00000544455 DUOX2Q9NRD8 1548 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 MLECQ14165 292 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 KNSTRNQ9Y448 316 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 SHROOM2Q13796 1616 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 ATP10AO60312 1499 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 CCDC136Q96JN2 1154 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 STK26Q9P289 416 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 PLPPR3Q6T4P5 718 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 ARID4BQ4LE39 1312 aaPredicted RBP5.05□□□□□ -1.6
BRCA2-206ENST00000544455 ABCC1P33527 1531 aa5.05□□□□□ -1.6
BRCA2-206ENST00000544455 RALBP1Q15311 655 aa5.04□□□□□ -1.6
BRCA2-206ENST00000544455 NLRP13Q86W25 1043 aa5.04□□□□□ -1.6
BRCA2-206ENST00000544455 WASHC2CQ9Y4E1 1318 aa5.04□□□□□ -1.6
BRCA2-206ENST00000544455 C20orf194Q5TEA3 1177 aa5.04□□□□□ -1.6
BRCA2-206ENST00000544455 KANK1Q14678 1352 aa5.04□□□□□ -1.6
BRCA2-206ENST00000544455 MAGI2Q86UL8 1455 aa5.04□□□□□ -1.6
BRCA2-206ENST00000544455 PPP2R1AP30153 589 aa5.03□□□□□ -1.6
BRCA2-206ENST00000544455 ZFYVE16Q7Z3T8 1539 aa5.03□□□□□ -1.6
BRCA2-206ENST00000544455 NOS1P29475 1434 aa5.03□□□□□ -1.6
BRCA2-206ENST00000544455 CD109Q6YHK3 1445 aa5.03□□□□□ -1.6
BRCA2-206ENST00000544455 PARD3Q8TEW0 1356 aa5.03□□□□□ -1.6
BRCA2-206ENST00000544455 WDR43Q15061 677 aaKnown RBP eCLIP5.03□□□□□ -1.6
BRCA2-206ENST00000544455 NPM2Q86SE8 214 aaKnown RBP5.03□□□□□ -1.6
BRCA2-206ENST00000544455 DMRT2Q9Y5R5 561 aa5.03□□□□□ -1.6
BRCA2-206ENST00000544455 BRD4O60885 1362 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-206ENST00000544455 RRP7AQ9Y3A4 280 aaKnown RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 SMG6Q86US8 1419 aaKnown RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 SLC12A5Q9H2X9 1139 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 MAST1Q9Y2H9 1570 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 UHRF1BP1LA0JNW5 1464 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 CARD14Q9BXL6 1004 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 COL17A1Q9UMD9 1497 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 RRP1P56182 461 aaKnown RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 FBXO31Q5XUX0 539 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 RCAN3Q9UKA8 241 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 LRPPRCP42704 1394 aaKnown RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 APAF1O14727 1248 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 CABP2Q9NPB3 220 aa5.02□□□□□ -1.61
BRCA2-206ENST00000544455 SPINK5Q9NQ38 1064 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-206ENST00000544455 ATP7AQ04656 1500 aa5.01□□□□□ -1.61
BRCA2-206ENST00000544455 GPRASP1Q5JY77 1395 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms