RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
SMG8-202ENST00000543872 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
SMG8-202ENST00000543872 CLCN1P35523 988 aa16.29■□□□□ 0.2
SMG8-202ENST00000543872 USP19O94966 1318 aa16.28■□□□□ 0.2
SMG8-202ENST00000543872 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.2
SMG8-202ENST00000543872 PDE4CQ08493 712 aa16.27■□□□□ 0.19
SMG8-202ENST00000543872 IGHDP01880 384 aa16.26■□□□□ 0.19
SMG8-202ENST00000543872 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
SMG8-202ENST00000543872 DUSP27Q5VZP5 1158 aa16.25■□□□□ 0.19
SMG8-202ENST00000543872 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
SMG8-202ENST00000543872 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMG8-202ENST00000543872 PANK3Q9H999 370 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 BCAR3O75815 825 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 DAPK1P53355 1430 aa16.23■□□□□ 0.19
SMG8-202ENST00000543872 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
SMG8-202ENST00000543872 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
SMG8-202ENST00000543872 ABCC5O15440 1437 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 KDM5CP41229 1560 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 MCM4P33991 863 aa16.21■□□□□ 0.19
SMG8-202ENST00000543872 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
SMG8-202ENST00000543872 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
SMG8-202ENST00000543872 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.18
SMG8-202ENST00000543872 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.18
SMG8-202ENST00000543872 ANTXR1Q9H6X2 564 aa16.21■□□□□ 0.18
SMG8-202ENST00000543872 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
SMG8-202ENST00000543872 ESPNB1AK53 854 aa16.2■□□□□ 0.18
SMG8-202ENST00000543872 TRAK2O60296 914 aa16.2■□□□□ 0.18
SMG8-202ENST00000543872 TRIM44Q96DX7 344 aaPredicted RBP16.2■□□□□ 0.18
SMG8-202ENST00000543872 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 PZPP20742 1482 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 CDK13Q14004 1512 aaKnown RBP16.19■□□□□ 0.18
SMG8-202ENST00000543872 FSD2A1L4K1 749 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
SMG8-202ENST00000543872 MRE11P49959 708 aa16.17■□□□□ 0.18
SMG8-202ENST00000543872 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
SMG8-202ENST00000543872 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
SMG8-202ENST00000543872 GRPEL1Q9HAV7 217 aa16.15■□□□□ 0.18
SMG8-202ENST00000543872 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
SMG8-202ENST00000543872 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
SMG8-202ENST00000543872 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
SMG8-202ENST00000543872 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 NUP155O75694 1391 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
SMG8-202ENST00000543872 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
SMG8-202ENST00000543872 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
SMG8-202ENST00000543872 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
SMG8-202ENST00000543872 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
SMG8-202ENST00000543872 POLA1P09884 1462 aaPredicted RBP16.13■□□□□ 0.17
SMG8-202ENST00000543872 KIF14Q15058 1648 aa16.13■□□□□ 0.17
SMG8-202ENST00000543872 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
SMG8-202ENST00000543872 APAF1O14727 1248 aa16.12■□□□□ 0.17
SMG8-202ENST00000543872 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 TBC1D32Q96NH3 1257 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
SMG8-202ENST00000543872 ARID3AQ99856 593 aa16.1■□□□□ 0.17
SMG8-202ENST00000543872 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
SMG8-202ENST00000543872 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.17
SMG8-202ENST00000543872 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
SMG8-202ENST00000543872 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
SMG8-202ENST00000543872 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
SMG8-202ENST00000543872 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
SMG8-202ENST00000543872 CUL7Q14999 1698 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
SMG8-202ENST00000543872 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 PLEKHH2Q8IVE3 1493 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 TPM2P07951 284 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 TMF1P82094 1093 aa16.05■□□□□ 0.16
SMG8-202ENST00000543872 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
SMG8-202ENST00000543872 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
SMG8-202ENST00000543872 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
SMG8-202ENST00000543872 ZNF521Q96K83 1311 aa16.04■□□□□ 0.16
SMG8-202ENST00000543872 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
SMG8-202ENST00000543872 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 C22orf23Q9BZE7 217 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 NESP48681 1621 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 CENPJQ9HC77 1338 aaPredicted RBP16.03■□□□□ 0.16
SMG8-202ENST00000543872 TNNQ9UQP3 1299 aa16.02■□□□□ 0.16
SMG8-202ENST00000543872 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms