RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
C12orf56-205ENST00000542397 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
C12orf56-205ENST00000542397 PDIA6Q15084 440 aa10.26□□□□□ -0.77
C12orf56-205ENST00000542397 ARIH1Q9Y4X5 557 aaPredicted RBP10.26□□□□□ -0.77
C12orf56-205ENST00000542397 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
C12orf56-205ENST00000542397 EPAS1Q99814 870 aa10.25□□□□□ -0.77
C12orf56-205ENST00000542397 ZBED2Q9BTP6 218 aa10.25□□□□□ -0.77
C12orf56-205ENST00000542397 STAC3Q96MF2 364 aa10.24□□□□□ -0.77
C12orf56-205ENST00000542397 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
C12orf56-205ENST00000542397 DDX12PQ92771 950 aa10.23□□□□□ -0.77
C12orf56-205ENST00000542397 RGS20O76081 388 aa10.22□□□□□ -0.77
C12orf56-205ENST00000542397 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
C12orf56-205ENST00000542397 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
C12orf56-205ENST00000542397 COL9A1P20849 921 aa10.19□□□□□ -0.78
C12orf56-205ENST00000542397 C6orf132Q5T0Z8 1188 aa10.18□□□□□ -0.78
C12orf56-205ENST00000542397 NBR1Q14596 966 aa10.17□□□□□ -0.78
C12orf56-205ENST00000542397 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
C12orf56-205ENST00000542397 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
C12orf56-205ENST00000542397 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
C12orf56-205ENST00000542397 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
C12orf56-205ENST00000542397 EN1Q05925 392 aaPredicted RBP10.15□□□□□ -0.78
C12orf56-205ENST00000542397 PROX2Q3B8N5 592 aa10.15□□□□□ -0.78
C12orf56-205ENST00000542397 MRPL50Q8N5N7 158 aaKnown RBP10.14□□□□□ -0.79
C12orf56-205ENST00000542397 NBPF3Q9H094 633 aa10.14□□□□□ -0.79
C12orf56-205ENST00000542397 RABGEF1Q9UJ41 708 aa10.14□□□□□ -0.79
C12orf56-205ENST00000542397 GRXCR2A6NFK2 248 aa10.13□□□□□ -0.79
C12orf56-205ENST00000542397 MAP3K7O43318 606 aa10.13□□□□□ -0.79
C12orf56-205ENST00000542397 GOLGA8CPA6NN73 597 aa10.11□□□□□ -0.79
C12orf56-205ENST00000542397 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
C12orf56-205ENST00000542397 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
C12orf56-205ENST00000542397 TSR1Q2NL82 804 aaKnown RBP10.1□□□□□ -0.79
C12orf56-205ENST00000542397 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
C12orf56-205ENST00000542397 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
C12orf56-205ENST00000542397 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
C12orf56-205ENST00000542397 OSBPP22059 807 aa10.08□□□□□ -0.8
C12orf56-205ENST00000542397 PRIM1P49642 420 aaKnown RBP10.08□□□□□ -0.8
C12orf56-205ENST00000542397 BCANQ96GW7 911 aa10.08□□□□□ -0.8
C12orf56-205ENST00000542397 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
C12orf56-205ENST00000542397 WNT2BQ93097 391 aa10.07□□□□□ -0.8
C12orf56-205ENST00000542397 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
C12orf56-205ENST00000542397 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
C12orf56-205ENST00000542397 PTPN5P54829 565 aa10.05□□□□□ -0.8
C12orf56-205ENST00000542397 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
C12orf56-205ENST00000542397 CERKQ8TCT0 537 aa10.04□□□□□ -0.8
C12orf56-205ENST00000542397 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
C12orf56-205ENST00000542397 PRSS12P56730 875 aa10.01□□□□□ -0.81
C12orf56-205ENST00000542397 PACS2Q86VP3 889 aa10.01□□□□□ -0.81
C12orf56-205ENST00000542397 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
C12orf56-205ENST00000542397 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
C12orf56-205ENST00000542397 CDHR5Q9HBB8 845 aa10.01□□□□□ -0.81
C12orf56-205ENST00000542397 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
C12orf56-205ENST00000542397 UNC13AQ9UPW8 1703 aa10.01□□□□□ -0.81
C12orf56-205ENST00000542397 MLLT3P42568 568 aaPredicted RBP10□□□□□ -0.81
C12orf56-205ENST00000542397 ZFRQ96KR1 1074 aaKnown RBP10□□□□□ -0.81
C12orf56-205ENST00000542397 FAM98CQ17RN3 349 aaKnown RBP9.99□□□□□ -0.81
C12orf56-205ENST00000542397 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
C12orf56-205ENST00000542397 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
C12orf56-205ENST00000542397 SOWAHBA6NEL2 793 aa9.96□□□□□ -0.82
C12orf56-205ENST00000542397 BCAMP50895 628 aa9.96□□□□□ -0.82
C12orf56-205ENST00000542397 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
C12orf56-205ENST00000542397 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
C12orf56-205ENST00000542397 KDM2AQ9Y2K7 1162 aa9.95□□□□□ -0.82
C12orf56-205ENST00000542397 Q6ZNB5 142 aa9.94□□□□□ -0.82
C12orf56-205ENST00000542397 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
C12orf56-205ENST00000542397 SEMA3EO15041 775 aa9.93□□□□□ -0.82
C12orf56-205ENST00000542397 TATDN2Q93075 761 aa9.93□□□□□ -0.82
C12orf56-205ENST00000542397 SMAPO00193 183 aa9.92□□□□□ -0.82
C12orf56-205ENST00000542397 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
C12orf56-205ENST00000542397 PNMA3Q9UL41 463 aa9.92□□□□□ -0.82
C12orf56-205ENST00000542397 C3orf80F5H4A9 247 aa9.91□□□□□ -0.82
C12orf56-205ENST00000542397 LRCH3Q96II8 777 aa9.91□□□□□ -0.82
C12orf56-205ENST00000542397 A0A0G2JS52 829 aa9.9□□□□□ -0.82
C12orf56-205ENST00000542397 PADI6Q6TGC4 694 aa9.9□□□□□ -0.82
C12orf56-205ENST00000542397 TTC13Q8NBP0 860 aa9.9□□□□□ -0.82
C12orf56-205ENST00000542397 NYAP1Q6ZVC0 841 aa9.89□□□□□ -0.83
C12orf56-205ENST00000542397 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
C12orf56-205ENST00000542397 WBP1LQ9NX94 342 aa9.89□□□□□ -0.83
C12orf56-205ENST00000542397 BICRAQ9NZM4 1560 aa9.88□□□□□ -0.83
C12orf56-205ENST00000542397 CECR2Q9BXF3 1484 aa9.88□□□□□ -0.83
C12orf56-205ENST00000542397 TSR3Q9UJK0 312 aaKnown RBP9.88□□□□□ -0.83
C12orf56-205ENST00000542397 PTGDRQ13258 359 aa9.87□□□□□ -0.83
C12orf56-205ENST00000542397 SAMD7Q7Z3H4 446 aa9.87□□□□□ -0.83
C12orf56-205ENST00000542397 HPS5Q9UPZ3 1129 aa9.87□□□□□ -0.83
C12orf56-205ENST00000542397 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
C12orf56-205ENST00000542397 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
C12orf56-205ENST00000542397 TESPA1A2RU30 521 aaPredicted RBP9.85□□□□□ -0.83
C12orf56-205ENST00000542397 NACADO15069 1562 aa9.84□□□□□ -0.83
C12orf56-205ENST00000542397 HDGFP51858 240 aaKnown RBP9.83□□□□□ -0.84
C12orf56-205ENST00000542397 PPP4CP60510 307 aa9.83□□□□□ -0.84
C12orf56-205ENST00000542397 SMYD5Q6GMV2 418 aa9.83□□□□□ -0.84
C12orf56-205ENST00000542397 ITGBL1O95965 494 aaPredicted RBP9.82□□□□□ -0.84
C12orf56-205ENST00000542397 FCHSD2O94868 740 aa9.81□□□□□ -0.84
C12orf56-205ENST00000542397 EYA1Q99502 592 aa9.81□□□□□ -0.84
C12orf56-205ENST00000542397 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
C12orf56-205ENST00000542397 SWT1Q5T5J6 900 aaKnown RBP9.78□□□□□ -0.84
C12orf56-205ENST00000542397 RBM26Q5T8P6 1007 aaKnown RBP9.78□□□□□ -0.84
C12orf56-205ENST00000542397 RNF40O75150 1001 aa9.77□□□□□ -0.85
C12orf56-205ENST00000542397 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.85
C12orf56-205ENST00000542397 KCNC4Q03721 635 aa9.76□□□□□ -0.85
C12orf56-205ENST00000542397 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms