RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 MFSD10Q14728 455 aa7.32□□□□□ -1.24
KNTC1-212ENST00000541466 VSIG10Q8N0Z9 540 aa7.32□□□□□ -1.24
KNTC1-212ENST00000541466 MRPL50Q8N5N7 158 aaKnown RBP7.32□□□□□ -1.24
KNTC1-212ENST00000541466 ADAM33Q9BZ11 813 aa7.31□□□□□ -1.24
KNTC1-212ENST00000541466 LAPTM4AQ15012 233 aa7.3□□□□□ -1.24
KNTC1-212ENST00000541466 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
KNTC1-212ENST00000541466 EMILIN3Q9NT22 766 aa7.3□□□□□ -1.24
KNTC1-212ENST00000541466 CADPS2Q86UW7 1296 aa7.29□□□□□ -1.24
KNTC1-212ENST00000541466 NBPF3Q9H094 633 aa7.29□□□□□ -1.24
KNTC1-212ENST00000541466 BHMG1C9JSJ3 638 aaPredicted RBP7.28□□□□□ -1.24
KNTC1-212ENST00000541466 WNT2BQ93097 391 aa7.28□□□□□ -1.24
KNTC1-212ENST00000541466 TYW1BQ6NUM6 668 aa7.27□□□□□ -1.25
KNTC1-212ENST00000541466 PCDHGA10Q9Y5H3 936 aa7.27□□□□□ -1.25
KNTC1-212ENST00000541466 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
KNTC1-212ENST00000541466 FBXW7Q969H0 707 aa7.26□□□□□ -1.25
KNTC1-212ENST00000541466 KDM2AQ9Y2K7 1162 aa7.26□□□□□ -1.25
KNTC1-212ENST00000541466 PPP1R3GB7ZBB8 358 aa7.25□□□□□ -1.25
KNTC1-212ENST00000541466 PHF14O94880 888 aa7.25□□□□□ -1.25
KNTC1-212ENST00000541466 DPYSL4O14531 572 aa7.23□□□□□ -1.25
KNTC1-212ENST00000541466 GFRA3O60609 400 aa7.23□□□□□ -1.25
KNTC1-212ENST00000541466 PROX2Q3B8N5 592 aa7.23□□□□□ -1.25
KNTC1-212ENST00000541466 WDR70Q9NW82 654 aa7.23□□□□□ -1.25
KNTC1-212ENST00000541466 RABGEF1Q9UJ41 708 aa7.23□□□□□ -1.25
KNTC1-212ENST00000541466 COL9A1P20849 921 aa7.22□□□□□ -1.25
KNTC1-212ENST00000541466 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
KNTC1-212ENST00000541466 EPAS1Q99814 870 aa7.22□□□□□ -1.25
KNTC1-212ENST00000541466 ANKK1Q8NFD2 765 aa7.21□□□□□ -1.26
KNTC1-212ENST00000541466 RBM33Q96EV2 1170 aaKnown RBP7.21□□□□□ -1.26
KNTC1-212ENST00000541466 CAMK2BQ13554 666 aa7.2□□□□□ -1.26
KNTC1-212ENST00000541466 C6orf132Q5T0Z8 1188 aa7.2□□□□□ -1.26
KNTC1-212ENST00000541466 ZNF787Q6DD87 383 aa7.2□□□□□ -1.26
KNTC1-212ENST00000541466 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
KNTC1-212ENST00000541466 DDX12PQ92771 950 aa7.19□□□□□ -1.26
KNTC1-212ENST00000541466 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
KNTC1-212ENST00000541466 LAPTM4BQ86VI4 370 aa7.17□□□□□ -1.26
KNTC1-212ENST00000541466 P3H3Q8IVL6 736 aa7.16□□□□□ -1.26
KNTC1-212ENST00000541466 BCAMP50895 628 aa7.15□□□□□ -1.26
KNTC1-212ENST00000541466 ZFRQ96KR1 1074 aaKnown RBP7.15□□□□□ -1.26
KNTC1-212ENST00000541466 SEPT9Q9UHD8 586 aaPredicted RBP7.15□□□□□ -1.26
KNTC1-212ENST00000541466 SOWAHBA6NEL2 793 aa7.14□□□□□ -1.27
KNTC1-212ENST00000541466 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
KNTC1-212ENST00000541466 NRG2O14511 850 aaPredicted RBP7.14□□□□□ -1.27
KNTC1-212ENST00000541466 MAP3K7O43318 606 aa7.14□□□□□ -1.27
KNTC1-212ENST00000541466 NBR1Q14596 966 aa7.14□□□□□ -1.27
KNTC1-212ENST00000541466 SPDYE16A6NNV3 312 aaPredicted RBP7.13□□□□□ -1.27
KNTC1-212ENST00000541466 PACS2Q86VP3 889 aa7.13□□□□□ -1.27
KNTC1-212ENST00000541466 E2F4Q16254 413 aa7.12□□□□□ -1.27
KNTC1-212ENST00000541466 KCNV2Q8TDN2 545 aa7.12□□□□□ -1.27
KNTC1-212ENST00000541466 KCNC4Q03721 635 aa7.11□□□□□ -1.27
KNTC1-212ENST00000541466 FAM98CQ17RN3 349 aaKnown RBP7.11□□□□□ -1.27
KNTC1-212ENST00000541466 NYAP1Q6ZVC0 841 aa7.11□□□□□ -1.27
KNTC1-212ENST00000541466 BCANQ96GW7 911 aa7.11□□□□□ -1.27
KNTC1-212ENST00000541466 WBP1LQ9NX94 342 aa7.11□□□□□ -1.27
KNTC1-212ENST00000541466 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.11□□□□□ -1.27
KNTC1-212ENST00000541466 GRXCR2A6NFK2 248 aa7.1□□□□□ -1.27
KNTC1-212ENST00000541466 EN1Q05925 392 aaPredicted RBP7.1□□□□□ -1.27
KNTC1-212ENST00000541466 PDIA6Q15084 440 aa7.1□□□□□ -1.27
KNTC1-212ENST00000541466 TSR1Q2NL82 804 aaKnown RBP7.1□□□□□ -1.27
KNTC1-212ENST00000541466 LRCH3Q96II8 777 aa7.1□□□□□ -1.27
KNTC1-212ENST00000541466 TSR3Q9UJK0 312 aaKnown RBP7.09□□□□□ -1.27
KNTC1-212ENST00000541466 HPS5Q9UPZ3 1129 aa7.09□□□□□ -1.27
KNTC1-212ENST00000541466 PPP4CP60510 307 aa7.07□□□□□ -1.28
KNTC1-212ENST00000541466 CDCA7LQ96GN5 454 aa7.07□□□□□ -1.28
KNTC1-212ENST00000541466 TSKSQ9UJT2 592 aa7.07□□□□□ -1.28
KNTC1-212ENST00000541466 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
KNTC1-212ENST00000541466 CERKQ8TCT0 537 aa7.06□□□□□ -1.28
KNTC1-212ENST00000541466 KRTAP4-6Q9BYQ5 205 aa7.06□□□□□ -1.28
KNTC1-212ENST00000541466 SMAPO00193 183 aa7.05□□□□□ -1.28
KNTC1-212ENST00000541466 HDGFP51858 240 aaKnown RBP7.05□□□□□ -1.28
KNTC1-212ENST00000541466 PRSS12P56730 875 aa7.05□□□□□ -1.28
KNTC1-212ENST00000541466 ARHGEF1Q92888 912 aaKnown RBP7.05□□□□□ -1.28
KNTC1-212ENST00000541466 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
KNTC1-212ENST00000541466 SAMD7Q7Z3H4 446 aa7.03□□□□□ -1.28
KNTC1-212ENST00000541466 PRKD2Q9BZL6 878 aa7.03□□□□□ -1.28
KNTC1-212ENST00000541466 NBPF26B4DH59 902 aa7.02□□□□□ -1.29
KNTC1-212ENST00000541466 TATDN2Q93075 761 aa7.02□□□□□ -1.29
KNTC1-212ENST00000541466 ARIH1Q9Y4X5 557 aaPredicted RBP7.02□□□□□ -1.29
KNTC1-212ENST00000541466 RNF40O75150 1001 aa7□□□□□ -1.29
KNTC1-212ENST00000541466 OSBPP22059 807 aa7□□□□□ -1.29
KNTC1-212ENST00000541466 PRIM1P49642 420 aaKnown RBP6.99□□□□□ -1.29
KNTC1-212ENST00000541466 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
KNTC1-212ENST00000541466 NUDT18Q6ZVK8 323 aa6.99□□□□□ -1.29
KNTC1-212ENST00000541466 FAM198AQ9UFP1 575 aa6.99□□□□□ -1.29
KNTC1-212ENST00000541466 CDHR5Q9HBB8 845 aa6.98□□□□□ -1.29
KNTC1-212ENST00000541466 V9GY48 417 aaPredicted RBP6.98□□□□□ -1.29
KNTC1-212ENST00000541466 TULP1O00294 542 aaPredicted RBP6.97□□□□□ -1.29
KNTC1-212ENST00000541466 C3orf80F5H4A9 247 aa6.96□□□□□ -1.3
KNTC1-212ENST00000541466 SEMA3EO15041 775 aa6.96□□□□□ -1.3
KNTC1-212ENST00000541466 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
KNTC1-212ENST00000541466 PDZRN3Q9UPQ7 1066 aa6.96□□□□□ -1.3
KNTC1-212ENST00000541466 SLC4A3P48751 1232 aa6.95□□□□□ -1.3
KNTC1-212ENST00000541466 IL21Q9HBE4 155 aa6.95□□□□□ -1.3
KNTC1-212ENST00000541466 POTECB2RU33 542 aa6.94□□□□□ -1.3
KNTC1-212ENST00000541466 TJAP1Q5JTD0 557 aa6.94□□□□□ -1.3
KNTC1-212ENST00000541466 MTRQ99707 1265 aa6.94□□□□□ -1.3
KNTC1-212ENST00000541466 RBM27Q9P2N5 1060 aaKnown RBP6.94□□□□□ -1.3
KNTC1-212ENST00000541466 PADI6Q6TGC4 694 aa6.93□□□□□ -1.3
KNTC1-212ENST00000541466 NECTIN2Q92692 538 aa6.93□□□□□ -1.3
KNTC1-212ENST00000541466 TESPA1A2RU30 521 aaPredicted RBP6.92□□□□□ -1.3
KNTC1-212ENST00000541466 SWT1Q5T5J6 900 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms