RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
CACNB3-203ENST00000540990 SYCP2Q9BX26 1530 aa22.9■■□□□ 1.26
CACNB3-203ENST00000540990 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
CACNB3-203ENST00000540990 CHD1O14646 1710 aa22.9■■□□□ 1.26
CACNB3-203ENST00000540990 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.25
CACNB3-203ENST00000540990 RNF123Q5XPI4 1314 aa22.89■■□□□ 1.25
CACNB3-203ENST00000540990 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.25
CACNB3-203ENST00000540990 IQGAP3Q86VI3 1631 aa22.89■■□□□ 1.25
CACNB3-203ENST00000540990 ABCC2Q92887 1545 aa22.89■■□□□ 1.25
CACNB3-203ENST00000540990 IRX6P78412 446 aaPredicted RBP22.88■■□□□ 1.25
CACNB3-203ENST00000540990 ATP10AO60312 1499 aa22.88■■□□□ 1.25
CACNB3-203ENST00000540990 PLA2R1Q13018 1463 aa22.87■■□□□ 1.25
CACNB3-203ENST00000540990 MAGI2Q86UL8 1455 aa22.87■■□□□ 1.25
CACNB3-203ENST00000540990 PNISRQ8TF01 805 aaKnown RBP22.87■■□□□ 1.25
CACNB3-203ENST00000540990 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
CACNB3-203ENST00000540990 FANCIQ9NVI1 1328 aa22.85■■□□□ 1.25
CACNB3-203ENST00000540990 ARHGAP5Q13017 1502 aa22.85■■□□□ 1.25
CACNB3-203ENST00000540990 BRD4O60885 1362 aaPredicted RBP22.85■■□□□ 1.25
CACNB3-203ENST00000540990 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
CACNB3-203ENST00000540990 MYO5CQ9NQX4 1742 aa22.84■■□□□ 1.25
CACNB3-203ENST00000540990 ST20-MTHFSA0A0A6YYL1 179 aa22.84■■□□□ 1.25
CACNB3-203ENST00000540990 DCAF11Q8TEB1 546 aa22.84■■□□□ 1.25
CACNB3-203ENST00000540990 RALBP1Q15311 655 aa22.83■■□□□ 1.25
CACNB3-203ENST00000540990 NUDCQ9Y266 331 aa22.83■■□□□ 1.25
CACNB3-203ENST00000540990 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
CACNB3-203ENST00000540990 A2MP01023 1474 aa22.8■■□□□ 1.24
CACNB3-203ENST00000540990 ERBINQ96RT1 1412 aa22.8■■□□□ 1.24
CACNB3-203ENST00000540990 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
CACNB3-203ENST00000540990 PRDM15P57071 1507 aaPredicted RBP22.79■■□□□ 1.24
CACNB3-203ENST00000540990 EIF2AK4Q9P2K8 1649 aaKnown RBP22.78■■□□□ 1.24
CACNB3-203ENST00000540990 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
CACNB3-203ENST00000540990 UHRF1BP1LA0JNW5 1464 aa22.77■■□□□ 1.24
CACNB3-203ENST00000540990 POLR3GLQ9BT43 218 aa22.76■■□□□ 1.23
CACNB3-203ENST00000540990 PLCH2O75038 1416 aa22.76■■□□□ 1.23
CACNB3-203ENST00000540990 PARD3Q8TEW0 1356 aa22.75■■□□□ 1.23
CACNB3-203ENST00000540990 COL17A1Q9UMD9 1497 aaPredicted RBP22.75■■□□□ 1.23
CACNB3-203ENST00000540990 TMC1Q8TDI8 760 aa22.75■■□□□ 1.23
CACNB3-203ENST00000540990 ERCC6L2Q5T890 1561 aa22.74■■□□□ 1.23
CACNB3-203ENST00000540990 INSRP06213 1382 aa22.73■■□□□ 1.23
CACNB3-203ENST00000540990 WASHC2CQ9Y4E1 1318 aa22.73■■□□□ 1.23
CACNB3-203ENST00000540990 ABCC1P33527 1531 aa22.71■■□□□ 1.23
CACNB3-203ENST00000540990 ZMYM4Q5VZL5 1548 aa22.71■■□□□ 1.23
CACNB3-203ENST00000540990 ARAP3Q8WWN8 1544 aa22.7■■□□□ 1.22
CACNB3-203ENST00000540990 RNF17Q9BXT8 1623 aaKnown RBP22.69■■□□□ 1.22
CACNB3-203ENST00000540990 CLASP1Q7Z460 1538 aa22.69■■□□□ 1.22
CACNB3-203ENST00000540990 PER1O15534 1290 aaPredicted RBP22.69■■□□□ 1.22
CACNB3-203ENST00000540990 B4GALNT3Q6L9W6 998 aa22.68■■□□□ 1.22
CACNB3-203ENST00000540990 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
CACNB3-203ENST00000540990 MSH5O43196 834 aa22.68■■□□□ 1.22
CACNB3-203ENST00000540990 NLRP13Q86W25 1043 aa22.67■■□□□ 1.22
CACNB3-203ENST00000540990 TESK2Q96S53 571 aa22.67■■□□□ 1.22
CACNB3-203ENST00000540990 NBPF1Q3BBV0 1214 aa22.66■■□□□ 1.22
CACNB3-203ENST00000540990 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
CACNB3-203ENST00000540990 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.22
CACNB3-203ENST00000540990 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
CACNB3-203ENST00000540990 PDE3BQ13370 1112 aa22.6■■□□□ 1.21
CACNB3-203ENST00000540990 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
CACNB3-203ENST00000540990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.21
CACNB3-203ENST00000540990 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
CACNB3-203ENST00000540990 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
CACNB3-203ENST00000540990 TRPM2O94759 1503 aa22.58■■□□□ 1.21
CACNB3-203ENST00000540990 DEPDC5O75140 1603 aa22.58■■□□□ 1.2
CACNB3-203ENST00000540990 PTPRTO14522 1441 aa22.58■■□□□ 1.2
CACNB3-203ENST00000540990 MADDQ8WXG6 1647 aa22.57■■□□□ 1.2
CACNB3-203ENST00000540990 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
CACNB3-203ENST00000540990 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
CACNB3-203ENST00000540990 BLMP54132 1417 aaPredicted RBP22.56■■□□□ 1.2
CACNB3-203ENST00000540990 NEURL4Q96JN8 1562 aa22.55■■□□□ 1.2
CACNB3-203ENST00000540990 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
CACNB3-203ENST00000540990 TMF1P82094 1093 aa22.54■■□□□ 1.2
CACNB3-203ENST00000540990 SCAPERQ9BY12 1400 aa22.53■■□□□ 1.2
CACNB3-203ENST00000540990 VWDEQ8N2E2 1590 aa22.53■■□□□ 1.2
CACNB3-203ENST00000540990 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
CACNB3-203ENST00000540990 CEP152O94986 1710 aa22.52■■□□□ 1.2
CACNB3-203ENST00000540990 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
CACNB3-203ENST00000540990 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
CACNB3-203ENST00000540990 TET3O43151 1660 aa22.49■■□□□ 1.19
CACNB3-203ENST00000540990 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
CACNB3-203ENST00000540990 PANK3Q9H999 370 aa22.48■■□□□ 1.19
CACNB3-203ENST00000540990 INO80Q9ULG1 1556 aaPredicted RBP22.48■■□□□ 1.19
CACNB3-203ENST00000540990 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
CACNB3-203ENST00000540990 ABCA9Q8IUA7 1624 aa22.47■■□□□ 1.19
CACNB3-203ENST00000540990 KIAA1210Q9ULL0 1709 aa22.46■■□□□ 1.19
CACNB3-203ENST00000540990 CLTCL1P53675 1640 aa22.46■■□□□ 1.19
CACNB3-203ENST00000540990 SCAF11Q99590 1463 aaKnown RBP22.45■■□□□ 1.18
CACNB3-203ENST00000540990 SYNMO15061 1565 aa22.45■■□□□ 1.18
CACNB3-203ENST00000540990 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.18
CACNB3-203ENST00000540990 ATP7AQ04656 1500 aa22.42■■□□□ 1.18
CACNB3-203ENST00000540990 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
CACNB3-203ENST00000540990 CDCA8Q53HL2 280 aa22.39■■□□□ 1.17
CACNB3-203ENST00000540990 CC2D1BQ5T0F9 858 aaKnown RBP22.39■■□□□ 1.17
CACNB3-203ENST00000540990 AFAP1Q8N556 730 aa22.38■■□□□ 1.17
CACNB3-203ENST00000540990 MROH1Q8NDA8 1641 aa22.37■■□□□ 1.17
CACNB3-203ENST00000540990 FANCAO15360 1455 aa22.37■■□□□ 1.17
CACNB3-203ENST00000540990 MYOM2P54296 1465 aa22.37■■□□□ 1.17
CACNB3-203ENST00000540990 KANK1Q14678 1352 aa22.36■■□□□ 1.17
CACNB3-203ENST00000540990 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
CACNB3-203ENST00000540990 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
CACNB3-203ENST00000540990 AMER1Q5JTC6 1135 aaPredicted RBP22.35■■□□□ 1.17
CACNB3-203ENST00000540990 PIK3C2GO75747 1445 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms