RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
KPNB1-203ENST00000540627 PLB1Q6P1J6 1458 aa9.88□□□□□ -0.83
KPNB1-203ENST00000540627 ADGRL2O95490 1459 aa9.87□□□□□ -0.83
KPNB1-203ENST00000540627 CARMIL2Q6F5E8 1435 aa9.87□□□□□ -0.83
KPNB1-203ENST00000540627 USP47Q96K76 1375 aa9.87□□□□□ -0.83
KPNB1-203ENST00000540627 POLR3GLQ9BT43 218 aa9.87□□□□□ -0.83
KPNB1-203ENST00000540627 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
KPNB1-203ENST00000540627 MBD5Q9P267 1494 aa9.86□□□□□ -0.83
KPNB1-203ENST00000540627 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
KPNB1-203ENST00000540627 ANKRD50Q9ULJ7 1429 aa9.85□□□□□ -0.83
KPNB1-203ENST00000540627 KIF14Q15058 1648 aa9.85□□□□□ -0.83
KPNB1-203ENST00000540627 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
KPNB1-203ENST00000540627 ARID4BQ4LE39 1312 aaPredicted RBP9.85□□□□□ -0.83
KPNB1-203ENST00000540627 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
KPNB1-203ENST00000540627 PLEKHD1A6NEE1 506 aa9.84□□□□□ -0.83
KPNB1-203ENST00000540627 CROCC2H7BZ55 1655 aa9.84□□□□□ -0.83
KPNB1-203ENST00000540627 CNGB1Q14028 1251 aaPredicted RBP9.84□□□□□ -0.83
KPNB1-203ENST00000540627 CEP170Q5SW79 1584 aa9.84□□□□□ -0.83
KPNB1-203ENST00000540627 DHX29Q7Z478 1369 aaKnown RBP9.84□□□□□ -0.83
KPNB1-203ENST00000540627 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
KPNB1-203ENST00000540627 NUP155O75694 1391 aa9.83□□□□□ -0.84
KPNB1-203ENST00000540627 ROCK2O75116 1388 aaKnown RBP9.82□□□□□ -0.84
KPNB1-203ENST00000540627 TSPY4P0CV99 314 aa9.82□□□□□ -0.84
KPNB1-203ENST00000540627 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
KPNB1-203ENST00000540627 B4GALNT3Q6L9W6 998 aa9.82□□□□□ -0.84
KPNB1-203ENST00000540627 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
KPNB1-203ENST00000540627 PROM2Q8N271 834 aa9.82□□□□□ -0.84
KPNB1-203ENST00000540627 MSH5O43196 834 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 CARD11Q9BXL7 1154 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 C9orf84Q5VXU9 1444 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 SMG6Q86US8 1419 aaKnown RBP9.81□□□□□ -0.84
KPNB1-203ENST00000540627 BCORL1Q5H9F3 1711 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 UHRF1BP1Q6BDS2 1440 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 KDM5CP41229 1560 aa9.81□□□□□ -0.84
KPNB1-203ENST00000540627 TRHP20396 242 aaPredicted RBP9.81□□□□□ -0.84
KPNB1-203ENST00000540627 RALGAPBQ86X10 1494 aa9.8□□□□□ -0.84
KPNB1-203ENST00000540627 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
KPNB1-203ENST00000540627 NUP160Q12769 1436 aa9.8□□□□□ -0.84
KPNB1-203ENST00000540627 ARHGEF12Q9NZN5 1544 aa9.8□□□□□ -0.84
KPNB1-203ENST00000540627 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
KPNB1-203ENST00000540627 NUDCQ9Y266 331 aa9.79□□□□□ -0.84
KPNB1-203ENST00000540627 CDC42BPAQ5VT25 1732 aa9.79□□□□□ -0.84
KPNB1-203ENST00000540627 ABCC10Q5T3U5 1492 aa9.78□□□□□ -0.84
KPNB1-203ENST00000540627 ATP10BO94823 1461 aa9.78□□□□□ -0.84
KPNB1-203ENST00000540627 KIF15Q9NS87 1388 aa9.78□□□□□ -0.84
KPNB1-203ENST00000540627 ABCA8O94911 1581 aa9.77□□□□□ -0.84
KPNB1-203ENST00000540627 PNISRQ8TF01 805 aaKnown RBP9.77□□□□□ -0.85
KPNB1-203ENST00000540627 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.85
KPNB1-203ENST00000540627 DCAF11Q8TEB1 546 aa9.77□□□□□ -0.85
KPNB1-203ENST00000540627 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
KPNB1-203ENST00000540627 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
KPNB1-203ENST00000540627 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
KPNB1-203ENST00000540627 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
KPNB1-203ENST00000540627 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
KPNB1-203ENST00000540627 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
KPNB1-203ENST00000540627 RNF123Q5XPI4 1314 aa9.75□□□□□ -0.85
KPNB1-203ENST00000540627 RALBP1Q15311 655 aa9.75□□□□□ -0.85
KPNB1-203ENST00000540627 CCDC136Q96JN2 1154 aa9.75□□□□□ -0.85
KPNB1-203ENST00000540627 PTPRGP23470 1445 aa9.74□□□□□ -0.85
KPNB1-203ENST00000540627 MYBBP1AQ9BQG0 1328 aaKnown RBP9.74□□□□□ -0.85
KPNB1-203ENST00000540627 ARHGEF5Q12774 1597 aa9.74□□□□□ -0.85
KPNB1-203ENST00000540627 BRD4O60885 1362 aaPredicted RBP9.74□□□□□ -0.85
KPNB1-203ENST00000540627 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
KPNB1-203ENST00000540627 HOXD11P31277 338 aaPredicted RBP9.73□□□□□ -0.85
KPNB1-203ENST00000540627 CCDC141Q6ZP82 1450 aa9.72□□□□□ -0.85
KPNB1-203ENST00000540627 SENP3-EIF4A1A0A087X0R7 540 aa9.72□□□□□ -0.85
KPNB1-203ENST00000540627 ARID3AQ99856 593 aa9.72□□□□□ -0.85
KPNB1-203ENST00000540627 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
KPNB1-203ENST00000540627 CCDC144AA2RUR9 1427 aa9.71□□□□□ -0.85
KPNB1-203ENST00000540627 FAM135AQ9P2D6 1515 aa9.71□□□□□ -0.85
KPNB1-203ENST00000540627 SPOCK2Q92563 424 aa9.71□□□□□ -0.86
KPNB1-203ENST00000540627 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
KPNB1-203ENST00000540627 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
KPNB1-203ENST00000540627 PRAG1Q86YV5 1406 aa9.69□□□□□ -0.86
KPNB1-203ENST00000540627 SAMD9LQ8IVG5 1584 aa9.69□□□□□ -0.86
KPNB1-203ENST00000540627 PREX2Q70Z35 1606 aa9.68□□□□□ -0.86
KPNB1-203ENST00000540627 E9PCH4 1651 aa9.68□□□□□ -0.86
KPNB1-203ENST00000540627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.67□□□□□ -0.868e-8■■□□□ 12.2
KPNB1-203ENST00000540627 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
KPNB1-203ENST00000540627 CDC42BPBQ9Y5S2 1711 aa9.67□□□□□ -0.86
KPNB1-203ENST00000540627 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
KPNB1-203ENST00000540627 BCL11AQ9H165 835 aa9.66□□□□□ -0.86
KPNB1-203ENST00000540627 NOP58Q9Y2X3 529 aaKnown RBP9.66□□□□□ -0.86
KPNB1-203ENST00000540627 TRPM1Q7Z4N2 1603 aa9.66□□□□□ -0.86
KPNB1-203ENST00000540627 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
KPNB1-203ENST00000540627 NBPF1Q3BBV0 1214 aa9.66□□□□□ -0.86
KPNB1-203ENST00000540627 ANP32AP39687 249 aaKnown RBP9.66□□□□□ -0.86
KPNB1-203ENST00000540627 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
KPNB1-203ENST00000540627 RCAN3Q9UKA8 241 aa9.66□□□□□ -0.86
KPNB1-203ENST00000540627 ARHGAP5Q13017 1502 aa9.65□□□□□ -0.86
KPNB1-203ENST00000540627 SYCP2Q9BX26 1530 aa9.65□□□□□ -0.86
KPNB1-203ENST00000540627 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
KPNB1-203ENST00000540627 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
KPNB1-203ENST00000540627 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
KPNB1-203ENST00000540627 WASHC2CQ9Y4E1 1318 aa9.65□□□□□ -0.86
KPNB1-203ENST00000540627 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
KPNB1-203ENST00000540627 UNC13BO14795 1591 aa9.64□□□□□ -0.87
KPNB1-203ENST00000540627 PLA2R1Q13018 1463 aa9.64□□□□□ -0.87
KPNB1-203ENST00000540627 MAST1Q9Y2H9 1570 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms