RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.89
GABARAPL1-208ENST00000540424 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
GABARAPL1-208ENST00000540424 C11orf95C9JLR9 678 aaPredicted RBP20.6■□□□□ 0.89
GABARAPL1-208ENST00000540424 ARID4BQ4LE39 1312 aaPredicted RBP20.6■□□□□ 0.89
GABARAPL1-208ENST00000540424 KIF7Q2M1P5 1343 aa20.59■□□□□ 0.89
GABARAPL1-208ENST00000540424 TTC37Q6PGP7 1564 aa20.59■□□□□ 0.89
GABARAPL1-208ENST00000540424 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.88
GABARAPL1-208ENST00000540424 IRX6P78412 446 aaPredicted RBP20.58■□□□□ 0.88
GABARAPL1-208ENST00000540424 MYO5CQ9NQX4 1742 aa20.57■□□□□ 0.88
GABARAPL1-208ENST00000540424 USP47Q96K76 1375 aa20.57■□□□□ 0.88
GABARAPL1-208ENST00000540424 RALGAPBQ86X10 1494 aa20.57■□□□□ 0.88
GABARAPL1-208ENST00000540424 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
GABARAPL1-208ENST00000540424 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
GABARAPL1-208ENST00000540424 FAM135AQ9P2D6 1515 aa20.55■□□□□ 0.88
GABARAPL1-208ENST00000540424 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
GABARAPL1-208ENST00000540424 HNRNPUQ00839 825 aaKnown RBP eCLIP20.54■□□□□ 0.88
GABARAPL1-208ENST00000540424 PLXNC1O60486 1568 aa20.54■□□□□ 0.88
GABARAPL1-208ENST00000540424 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
GABARAPL1-208ENST00000540424 KDM5CP41229 1560 aa20.52■□□□□ 0.88
GABARAPL1-208ENST00000540424 UNC13BO14795 1591 aa20.52■□□□□ 0.88
GABARAPL1-208ENST00000540424 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
GABARAPL1-208ENST00000540424 ROCK2O75116 1388 aaKnown RBP20.5■□□□□ 0.87
GABARAPL1-208ENST00000540424 PLCH2O75038 1416 aa20.5■□□□□ 0.87
GABARAPL1-208ENST00000540424 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.49■□□□□ 0.87
GABARAPL1-208ENST00000540424 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
GABARAPL1-208ENST00000540424 DUOX2Q9NRD8 1548 aa20.49■□□□□ 0.87
GABARAPL1-208ENST00000540424 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
GABARAPL1-208ENST00000540424 CARD11Q9BXL7 1154 aa20.48■□□□□ 0.87
GABARAPL1-208ENST00000540424 CCDC144AA2RUR9 1427 aa20.48■□□□□ 0.87
GABARAPL1-208ENST00000540424 ANP32AP39687 249 aaKnown RBP20.47■□□□□ 0.87
GABARAPL1-208ENST00000540424 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
GABARAPL1-208ENST00000540424 ERBINQ96RT1 1412 aa20.47■□□□□ 0.87
GABARAPL1-208ENST00000540424 RTN4Q9NQC3 1192 aaKnown RBP20.45■□□□□ 0.87
GABARAPL1-208ENST00000540424 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
GABARAPL1-208ENST00000540424 IQGAP3Q86VI3 1631 aa20.44■□□□□ 0.86
GABARAPL1-208ENST00000540424 ZBTB47Q9UFB7 747 aaPredicted RBP20.43■□□□□ 0.86
GABARAPL1-208ENST00000540424 BCORL1Q5H9F3 1711 aa20.43■□□□□ 0.86
GABARAPL1-208ENST00000540424 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
GABARAPL1-208ENST00000540424 ARAP3Q8WWN8 1544 aa20.42■□□□□ 0.86
GABARAPL1-208ENST00000540424 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
GABARAPL1-208ENST00000540424 ABCC1P33527 1531 aa20.41■□□□□ 0.86
GABARAPL1-208ENST00000540424 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
GABARAPL1-208ENST00000540424 DHX29Q7Z478 1369 aaKnown RBP20.4■□□□□ 0.86
GABARAPL1-208ENST00000540424 USP35Q9P2H5 1018 aa20.39■□□□□ 0.86
GABARAPL1-208ENST00000540424 WASHC2CQ9Y4E1 1318 aa20.39■□□□□ 0.85
GABARAPL1-208ENST00000540424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
GABARAPL1-208ENST00000540424 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
GABARAPL1-208ENST00000540424 ATP10AO60312 1499 aa20.38■□□□□ 0.85
GABARAPL1-208ENST00000540424 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
GABARAPL1-208ENST00000540424 POLR3GLQ9BT43 218 aa20.38■□□□□ 0.85
GABARAPL1-208ENST00000540424 PRAG1Q86YV5 1406 aa20.37■□□□□ 0.85
GABARAPL1-208ENST00000540424 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
GABARAPL1-208ENST00000540424 RTEL1-TNFRSF6BF6WH68 1400 aa20.36■□□□□ 0.85
GABARAPL1-208ENST00000540424 PLA2R1Q13018 1463 aa20.35■□□□□ 0.85
GABARAPL1-208ENST00000540424 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
GABARAPL1-208ENST00000540424 ST20-MTHFSA0A0A6YYL1 179 aa20.34■□□□□ 0.85
GABARAPL1-208ENST00000540424 TRPM1Q7Z4N2 1603 aa20.33■□□□□ 0.85
GABARAPL1-208ENST00000540424 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
GABARAPL1-208ENST00000540424 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
GABARAPL1-208ENST00000540424 GPRASP1Q5JY77 1395 aa20.31■□□□□ 0.84
GABARAPL1-208ENST00000540424 TRAPPC8Q9Y2L5 1435 aa20.31■□□□□ 0.84
GABARAPL1-208ENST00000540424 LAMC1P11047 1609 aa20.31■□□□□ 0.84
GABARAPL1-208ENST00000540424 A2MP01023 1474 aa20.3■□□□□ 0.84
GABARAPL1-208ENST00000540424 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
GABARAPL1-208ENST00000540424 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
GABARAPL1-208ENST00000540424 RGL3Q3MIN7 710 aa20.28■□□□□ 0.84
GABARAPL1-208ENST00000540424 ZFYVE16Q7Z3T8 1539 aa20.26■□□□□ 0.83
GABARAPL1-208ENST00000540424 RALBP1Q15311 655 aa20.26■□□□□ 0.83
GABARAPL1-208ENST00000540424 STAC3Q96MF2 364 aa20.24■□□□□ 0.83
GABARAPL1-208ENST00000540424 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
GABARAPL1-208ENST00000540424 PKNOX2Q96KN3 472 aa20.23■□□□□ 0.83
GABARAPL1-208ENST00000540424 E9PCH4 1651 aa20.23■□□□□ 0.83
GABARAPL1-208ENST00000540424 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
GABARAPL1-208ENST00000540424 ABCA9Q8IUA7 1624 aa20.22■□□□□ 0.83
GABARAPL1-208ENST00000540424 FANCAO15360 1455 aa20.22■□□□□ 0.83
GABARAPL1-208ENST00000540424 NEFMP07197 916 aa20.22■□□□□ 0.83
GABARAPL1-208ENST00000540424 KANK1Q14678 1352 aa20.21■□□□□ 0.83
GABARAPL1-208ENST00000540424 MYBBP1AQ9BQG0 1328 aaKnown RBP20.21■□□□□ 0.83
GABARAPL1-208ENST00000540424 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
GABARAPL1-208ENST00000540424 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
GABARAPL1-208ENST00000540424 PPM1GO15355 546 aaPredicted RBP20.2■□□□□ 0.82
GABARAPL1-208ENST00000540424 DEPDC5O75140 1603 aa20.19■□□□□ 0.82
GABARAPL1-208ENST00000540424 TRPM2O94759 1503 aa20.19■□□□□ 0.82
GABARAPL1-208ENST00000540424 EIF5BO60841 1220 aaKnown RBP20.19■□□□□ 0.82
GABARAPL1-208ENST00000540424 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
GABARAPL1-208ENST00000540424 ATP7AQ04656 1500 aa20.19■□□□□ 0.82
GABARAPL1-208ENST00000540424 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
GABARAPL1-208ENST00000540424 COL17A1Q9UMD9 1497 aaPredicted RBP20.18■□□□□ 0.82
GABARAPL1-208ENST00000540424 PNISRQ8TF01 805 aaKnown RBP20.18■□□□□ 0.82
GABARAPL1-208ENST00000540424 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
GABARAPL1-208ENST00000540424 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
GABARAPL1-208ENST00000540424 PTPRTO14522 1441 aa20.16■□□□□ 0.82
GABARAPL1-208ENST00000540424 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
GABARAPL1-208ENST00000540424 ADGRL1O94910 1474 aa20.16■□□□□ 0.82
GABARAPL1-208ENST00000540424 TET3O43151 1660 aa20.15■□□□□ 0.82
GABARAPL1-208ENST00000540424 TMF1P82094 1093 aa20.15■□□□□ 0.82
GABARAPL1-208ENST00000540424 ASXL2Q76L83 1435 aa20.15■□□□□ 0.82
GABARAPL1-208ENST00000540424 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
GABARAPL1-208ENST00000540424 BRPF3Q9ULD4 1205 aa20.14■□□□□ 0.81
GABARAPL1-208ENST00000540424 SCAPERQ9BY12 1400 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms