RNA–Protein interactions for RNA: ENST00000539835.1

PRB3-203, Transcript of proline rich protein BstNI subfamily 3, humanhuman

TSL 2

Gene PRB3, Length 476 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRB3-203ENST00000539835 ZCCHC11Q5TAX3 1644 aaKnown RBP7.55□□□□□ -1.2
PRB3-203ENST00000539835 ARID4BQ4LE39 1312 aaPredicted RBP7.54□□□□□ -1.2
PRB3-203ENST00000539835 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
PRB3-203ENST00000539835 CIZ1Q9ULV3 898 aaPredicted RBP7.54□□□□□ -1.2
PRB3-203ENST00000539835 HSPA1LP34931 641 aa7.53□□□□□ -1.2
PRB3-203ENST00000539835 PSEN1P49768 467 aa7.53□□□□□ -1.2
PRB3-203ENST00000539835 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
PRB3-203ENST00000539835 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
PRB3-203ENST00000539835 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.53□□□□□ -1.2
PRB3-203ENST00000539835 RGS17Q9UGC6 210 aaPredicted RBP7.53□□□□□ -1.2
PRB3-203ENST00000539835 CFAP43Q8NDM7 1665 aa7.53□□□□□ -1.2
PRB3-203ENST00000539835 UBAP1LF5GYI3 381 aa7.52□□□□□ -1.21
PRB3-203ENST00000539835 CARMIL2Q6F5E8 1435 aa7.52□□□□□ -1.21
PRB3-203ENST00000539835 DISP1Q96F81 1524 aa7.51□□□□□ -1.21
PRB3-203ENST00000539835 IGF1RP08069 1367 aa7.5□□□□□ -1.21
PRB3-203ENST00000539835 PHLDB1Q86UU1 1377 aa7.5□□□□□ -1.21
PRB3-203ENST00000539835 ST18O60284 1047 aa7.5□□□□□ -1.21
PRB3-203ENST00000539835 FRMPD1Q5SYB0 1578 aa7.5□□□□□ -1.21
PRB3-203ENST00000539835 CEBPAP49715 358 aaPredicted RBP7.49□□□□□ -1.21
PRB3-203ENST00000539835 L3MBTL3Q96JM7 780 aaPredicted RBP7.49□□□□□ -1.21
PRB3-203ENST00000539835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.49□□□□□ -1.21
PRB3-203ENST00000539835 SIGLEC1Q9BZZ2 1709 aa7.49□□□□□ -1.21
PRB3-203ENST00000539835 SNPHO15079 494 aa7.48□□□□□ -1.21
PRB3-203ENST00000539835 PDAP1Q13442 181 aaKnown RBP7.48□□□□□ -1.21
PRB3-203ENST00000539835 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
PRB3-203ENST00000539835 C3orf67Q6ZVT6 689 aa7.47□□□□□ -1.21
PRB3-203ENST00000539835 PDCD7Q8N8D1 485 aaKnown RBP7.47□□□□□ -1.21
PRB3-203ENST00000539835 BIVM-ERCC5R4GMW8 1640 aa7.47□□□□□ -1.21
PRB3-203ENST00000539835 TTC37Q6PGP7 1564 aa7.46□□□□□ -1.21
PRB3-203ENST00000539835 SETD1BQ9UPS6 1966 aaKnown RBP7.46□□□□□ -1.21
PRB3-203ENST00000539835 PREX1Q8TCU6 1659 aa7.46□□□□□ -1.22
PRB3-203ENST00000539835 ZNF335Q9H4Z2 1342 aaPredicted RBP7.45□□□□□ -1.22
PRB3-203ENST00000539835 CABP2Q9NPB3 220 aa7.44□□□□□ -1.22
PRB3-203ENST00000539835 ARHGEF40Q8TER5 1519 aa7.43□□□□□ -1.22
PRB3-203ENST00000539835 MLECQ14165 292 aa7.43□□□□□ -1.22
PRB3-203ENST00000539835 TMEM121BQ9BXQ6 578 aaPredicted RBP7.43□□□□□ -1.22
PRB3-203ENST00000539835 POGZQ7Z3K3 1410 aa7.43□□□□□ -1.22
PRB3-203ENST00000539835 NEO1Q92859 1461 aa7.43□□□□□ -1.22
PRB3-203ENST00000539835 G3V3G9 751 aa7.42□□□□□ -1.22
PRB3-203ENST00000539835 POTEAQ6S8J7 498 aa7.42□□□□□ -1.22
PRB3-203ENST00000539835 NCOA1Q15788 1441 aa7.42□□□□□ -1.22
PRB3-203ENST00000539835 UHRF1BP1Q6BDS2 1440 aa7.42□□□□□ -1.22
PRB3-203ENST00000539835 ARHGEF12Q9NZN5 1544 aa7.42□□□□□ -1.22
PRB3-203ENST00000539835 FHOD3Q2V2M9 1422 aa7.41□□□□□ -1.22
PRB3-203ENST00000539835 PIP4K2BP78356 416 aa7.4□□□□□ -1.22
PRB3-203ENST00000539835 FANCAO15360 1455 aa7.4□□□□□ -1.22
PRB3-203ENST00000539835 IQGAP2Q13576 1575 aa7.4□□□□□ -1.22
PRB3-203ENST00000539835 FER1L4A9Z1Z3 1794 aa7.4□□□□□ -1.23
PRB3-203ENST00000539835 AKNAQ7Z591 1439 aa7.39□□□□□ -1.23
PRB3-203ENST00000539835 DPY19L2Q6NUT2 758 aa7.39□□□□□ -1.23
PRB3-203ENST00000539835 MARVELD3Q96A59 401 aa7.39□□□□□ -1.23
PRB3-203ENST00000539835 ABCA9Q8IUA7 1624 aa7.38□□□□□ -1.23
PRB3-203ENST00000539835 ALKQ9UM73 1620 aa7.38□□□□□ -1.23
PRB3-203ENST00000539835 UGGT2Q9NYU1 1516 aa7.38□□□□□ -1.23
PRB3-203ENST00000539835 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
PRB3-203ENST00000539835 RICTORQ6R327 1708 aa7.38□□□□□ -1.23
PRB3-203ENST00000539835 ABCA8O94911 1581 aa7.37□□□□□ -1.23
PRB3-203ENST00000539835 CARMIL1Q5VZK9 1371 aa7.37□□□□□ -1.23
PRB3-203ENST00000539835 NCKAP5LQ9HCH0 1330 aa7.37□□□□□ -1.23
PRB3-203ENST00000539835 DENND4BO75064 1496 aaPredicted RBP7.36□□□□□ -1.23
PRB3-203ENST00000539835 TOM1O60784 492 aa7.36□□□□□ -1.23
PRB3-203ENST00000539835 UPF1Q92900 1129 aaKnown RBP eCLIP7.36□□□□□ -1.23
PRB3-203ENST00000539835 KIAA0556O60303 1618 aa7.35□□□□□ -1.23
PRB3-203ENST00000539835 ZMYM4Q5VZL5 1548 aa7.35□□□□□ -1.23
PRB3-203ENST00000539835 ATP10BO94823 1461 aa7.35□□□□□ -1.23
PRB3-203ENST00000539835 EFCAB3Q8N7B9 438 aa7.34□□□□□ -1.23
PRB3-203ENST00000539835 MAGI2Q86UL8 1455 aa7.33□□□□□ -1.24
PRB3-203ENST00000539835 EMP3P54852 163 aa7.33□□□□□ -1.24
PRB3-203ENST00000539835 TRAPPC8Q9Y2L5 1435 aa7.33□□□□□ -1.24
PRB3-203ENST00000539835 ZFYVE16Q7Z3T8 1539 aa7.32□□□□□ -1.24
PRB3-203ENST00000539835 CAMSAP1Q5T5Y3 1602 aa7.32□□□□□ -1.24
PRB3-203ENST00000539835 RIOK3O14730 519 aaKnown RBP7.31□□□□□ -1.24
PRB3-203ENST00000539835 EFCAB5A4FU69 1503 aa7.31□□□□□ -1.24
PRB3-203ENST00000539835 ATP10AO60312 1499 aa7.3□□□□□ -1.24
PRB3-203ENST00000539835 KIF27Q86VH2 1401 aa7.3□□□□□ -1.24
PRB3-203ENST00000539835 FAM205CA6NFA0 338 aa7.3□□□□□ -1.24
PRB3-203ENST00000539835 ARID3CA6NKF2 412 aa7.3□□□□□ -1.24
PRB3-203ENST00000539835 HECW1Q76N89 1606 aa7.3□□□□□ -1.24
PRB3-203ENST00000539835 TCOF1Q13428 1488 aaKnown RBP7.3□□□□□ -1.24
PRB3-203ENST00000539835 SETD1AO15047 1707 aaKnown RBP7.3□□□□□ -1.24
PRB3-203ENST00000539835 C3P01024 1663 aa7.29□□□□□ -1.24
PRB3-203ENST00000539835 PKD2Q13563 968 aa7.29□□□□□ -1.24
PRB3-203ENST00000539835 SPNS2Q8IVW8 549 aa7.29□□□□□ -1.24
PRB3-203ENST00000539835 VGFO15240 615 aaPredicted RBP7.28□□□□□ -1.24
PRB3-203ENST00000539835 SOX12O15370 315 aa7.28□□□□□ -1.24
PRB3-203ENST00000539835 ZNF710Q8N1W2 664 aa7.28□□□□□ -1.24
PRB3-203ENST00000539835 HS3ST6Q96QI5 342 aa7.28□□□□□ -1.24
PRB3-203ENST00000539835 C9orf84Q5VXU9 1444 aa7.27□□□□□ -1.24
PRB3-203ENST00000539835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.27□□□□□ -1.25
PRB3-203ENST00000539835 MMRN1Q13201 1228 aa7.27□□□□□ -1.25
PRB3-203ENST00000539835 ZFP91Q96JP5 570 aaPredicted RBP7.27□□□□□ -1.25
PRB3-203ENST00000539835 RAPGEF2Q9Y4G8 1499 aa7.27□□□□□ -1.25
PRB3-203ENST00000539835 PLA2R1Q13018 1463 aa7.26□□□□□ -1.25
PRB3-203ENST00000539835 HOXB3P14651 431 aaPredicted RBP7.26□□□□□ -1.25
PRB3-203ENST00000539835 DOK7Q18PE1 504 aa7.26□□□□□ -1.25
PRB3-203ENST00000539835 RNF25Q96BH1 459 aaPredicted RBP7.26□□□□□ -1.25
PRB3-203ENST00000539835 PTPRKQ15262 1439 aa7.26□□□□□ -1.25
PRB3-203ENST00000539835 SHANK2Q9UPX8 1470 aa7.24□□□□□ -1.25
PRB3-203ENST00000539835 CPS1P31327 1500 aa7.24□□□□□ -1.25
PRB3-203ENST00000539835 POTEB3A0JP26 581 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms