RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 APAF1O14727 1248 aa20.29■□□□□ 0.84
ATP2A2-204ENST00000539276 MS4A1P11836 297 aa20.29■□□□□ 0.84
ATP2A2-204ENST00000539276 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
ATP2A2-204ENST00000539276 PTPRGP23470 1445 aa20.29■□□□□ 0.84
ATP2A2-204ENST00000539276 C9orf84Q5VXU9 1444 aa20.29■□□□□ 0.84
ATP2A2-204ENST00000539276 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
ATP2A2-204ENST00000539276 CFAP53Q96M91 514 aa20.28■□□□□ 0.84
ATP2A2-204ENST00000539276 MORC1Q86VD1 984 aa20.28■□□□□ 0.84
ATP2A2-204ENST00000539276 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
ATP2A2-204ENST00000539276 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.84
ATP2A2-204ENST00000539276 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
ATP2A2-204ENST00000539276 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
ATP2A2-204ENST00000539276 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATP2A2-204ENST00000539276 CLUAP1Q96AJ1 413 aa20.26■□□□□ 0.83
ATP2A2-204ENST00000539276 CENPQQ7L2Z9 268 aaPredicted RBP20.25■□□□□ 0.83
ATP2A2-204ENST00000539276 RRP7AQ9Y3A4 280 aaKnown RBP20.25■□□□□ 0.83
ATP2A2-204ENST00000539276 KIF3BO15066 747 aa20.25■□□□□ 0.83
ATP2A2-204ENST00000539276 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
ATP2A2-204ENST00000539276 BACH2Q9BYV9 841 aa20.24■□□□□ 0.83
ATP2A2-204ENST00000539276 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
ATP2A2-204ENST00000539276 NPM1P06748 294 aaKnown RBP eCLIP20.24■□□□□ 0.83
ATP2A2-204ENST00000539276 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
ATP2A2-204ENST00000539276 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
ATP2A2-204ENST00000539276 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
ATP2A2-204ENST00000539276 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
ATP2A2-204ENST00000539276 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
ATP2A2-204ENST00000539276 SPAG9O60271 1321 aaKnown RBP20.21■□□□□ 0.83
ATP2A2-204ENST00000539276 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
ATP2A2-204ENST00000539276 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
ATP2A2-204ENST00000539276 TCOF1Q13428 1488 aaKnown RBP20.2■□□□□ 0.82
ATP2A2-204ENST00000539276 COG6Q9Y2V7 657 aa20.19■□□□□ 0.82
ATP2A2-204ENST00000539276 MAGI3Q5TCQ9 1506 aa20.19■□□□□ 0.82
ATP2A2-204ENST00000539276 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
ATP2A2-204ENST00000539276 KANK1Q14678 1352 aa20.18■□□□□ 0.82
ATP2A2-204ENST00000539276 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
ATP2A2-204ENST00000539276 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
ATP2A2-204ENST00000539276 GGT6Q6P531 493 aa20.18■□□□□ 0.82
ATP2A2-204ENST00000539276 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
ATP2A2-204ENST00000539276 DHX29Q7Z478 1369 aaKnown RBP20.17■□□□□ 0.82
ATP2A2-204ENST00000539276 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
ATP2A2-204ENST00000539276 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
ATP2A2-204ENST00000539276 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
ATP2A2-204ENST00000539276 TRAK1Q9UPV9 953 aa20.16■□□□□ 0.82
ATP2A2-204ENST00000539276 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
ATP2A2-204ENST00000539276 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
ATP2A2-204ENST00000539276 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.82
ATP2A2-204ENST00000539276 GSE1Q14687 1217 aa20.14■□□□□ 0.81
ATP2A2-204ENST00000539276 MAPK8IP3Q9UPT6 1336 aa20.14■□□□□ 0.81
ATP2A2-204ENST00000539276 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
ATP2A2-204ENST00000539276 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
ATP2A2-204ENST00000539276 NFKBIBQ15653 356 aa20.13■□□□□ 0.81
ATP2A2-204ENST00000539276 KDM6BO15054 1643 aa20.12■□□□□ 0.81
ATP2A2-204ENST00000539276 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
ATP2A2-204ENST00000539276 GPATCH8Q9UKJ3 1502 aaKnown RBP20.11■□□□□ 0.81
ATP2A2-204ENST00000539276 E9PSI1 815 aa20.11■□□□□ 0.81
ATP2A2-204ENST00000539276 STK26Q9P289 416 aa20.11■□□□□ 0.81
ATP2A2-204ENST00000539276 EIF3AQ14152 1382 aaKnown RBP20.11■□□□□ 0.81
ATP2A2-204ENST00000539276 TEX14Q8IWB6 1497 aa20.11■□□□□ 0.81
ATP2A2-204ENST00000539276 BCAR3O75815 825 aa20.1■□□□□ 0.81
ATP2A2-204ENST00000539276 WASHC2CQ9Y4E1 1318 aa20.09■□□□□ 0.81
ATP2A2-204ENST00000539276 AFAP1Q8N556 730 aa20.09■□□□□ 0.81
ATP2A2-204ENST00000539276 PANK1Q8TE04 598 aa20.09■□□□□ 0.81
ATP2A2-204ENST00000539276 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
ATP2A2-204ENST00000539276 GZF1Q9H116 711 aaPredicted RBP20.08■□□□□ 0.81
ATP2A2-204ENST00000539276 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
ATP2A2-204ENST00000539276 SAMD9Q5K651 1589 aa20.07■□□□□ 0.8
ATP2A2-204ENST00000539276 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
ATP2A2-204ENST00000539276 PZPP20742 1482 aa20.05■□□□□ 0.8
ATP2A2-204ENST00000539276 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
ATP2A2-204ENST00000539276 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
ATP2A2-204ENST00000539276 RWDD1Q9H446 243 aaPredicted RBP20.05■□□□□ 0.8
ATP2A2-204ENST00000539276 POGKQ9P215 609 aa20.05■□□□□ 0.8
ATP2A2-204ENST00000539276 WDR62O43379 1518 aa20.04■□□□□ 0.8
ATP2A2-204ENST00000539276 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
ATP2A2-204ENST00000539276 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
ATP2A2-204ENST00000539276 MFAP1P55081 439 aaKnown RBP20.04■□□□□ 0.8
ATP2A2-204ENST00000539276 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
ATP2A2-204ENST00000539276 PMFBP1Q8TBY8 1022 aa20.03■□□□□ 0.8
ATP2A2-204ENST00000539276 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
ATP2A2-204ENST00000539276 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
ATP2A2-204ENST00000539276 DISP3Q9P2K9 1392 aa20.02■□□□□ 0.8
ATP2A2-204ENST00000539276 SMC4Q9NTJ3 1288 aa20.02■□□□□ 0.8
ATP2A2-204ENST00000539276 BRPF3Q9ULD4 1205 aa20.02■□□□□ 0.8
ATP2A2-204ENST00000539276 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
ATP2A2-204ENST00000539276 FRAT2O75474 233 aaPredicted RBP20.01■□□□□ 0.79
ATP2A2-204ENST00000539276 ANP32BQ92688 251 aaKnown RBP20.01■□□□□ 0.79
ATP2A2-204ENST00000539276 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
ATP2A2-204ENST00000539276 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
ATP2A2-204ENST00000539276 HSCBQ8IWL3 235 aa19.97■□□□□ 0.79
ATP2A2-204ENST00000539276 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
ATP2A2-204ENST00000539276 RAPGEF6Q8TEU7 1601 aa19.96■□□□□ 0.79
ATP2A2-204ENST00000539276 DENND4BO75064 1496 aaPredicted RBP19.96■□□□□ 0.79
ATP2A2-204ENST00000539276 HSP90AB1P08238 724 aaKnown RBP19.96■□□□□ 0.79
ATP2A2-204ENST00000539276 DUSP27Q5VZP5 1158 aa19.96■□□□□ 0.79
ATP2A2-204ENST00000539276 TMEM132EQ6IEE7 984 aa19.96■□□□□ 0.79
ATP2A2-204ENST00000539276 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
ATP2A2-204ENST00000539276 PER1O15534 1290 aaPredicted RBP19.94■□□□□ 0.78
ATP2A2-204ENST00000539276 SLFN5Q08AF3 891 aa19.94■□□□□ 0.78
ATP2A2-204ENST00000539276 TRIM44Q96DX7 344 aaPredicted RBP19.94■□□□□ 0.78
ATP2A2-204ENST00000539276 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms