RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 SPOCK2Q92563 424 aa10.21□□□□□ -0.77
SP140-212ENST00000538494 UHRF1BP1LA0JNW5 1464 aa10.21□□□□□ -0.78
SP140-212ENST00000538494 KIAA0586Q9BVV6 1533 aa10.21□□□□□ -0.78
SP140-212ENST00000538494 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
SP140-212ENST00000538494 PTPRGP23470 1445 aa10.2□□□□□ -0.78
SP140-212ENST00000538494 ADAMTSL3P82987 1691 aa10.19□□□□□ -0.78
SP140-212ENST00000538494 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
SP140-212ENST00000538494 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
SP140-212ENST00000538494 ERBB3P21860 1342 aa10.17□□□□□ -0.78
SP140-212ENST00000538494 DOK7Q18PE1 504 aa10.16□□□□□ -0.78
SP140-212ENST00000538494 KDM5BQ9UGL1 1544 aa10.16□□□□□ -0.78
SP140-212ENST00000538494 SPATA31D1Q6ZQQ2 1576 aa10.15□□□□□ -0.78
SP140-212ENST00000538494 MAGI3Q5TCQ9 1506 aa10.14□□□□□ -0.79
SP140-212ENST00000538494 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
SP140-212ENST00000538494 KIF21BO75037 1637 aa10.12□□□□□ -0.79
SP140-212ENST00000538494 EFCAB3Q8N7B9 438 aa10.12□□□□□ -0.79
SP140-212ENST00000538494 CUL7Q14999 1698 aa10.12□□□□□ -0.79
SP140-212ENST00000538494 UACAQ9BZF9 1416 aa10.11□□□□□ -0.79
SP140-212ENST00000538494 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
SP140-212ENST00000538494 RIMBP2O15034 1052 aa10.1□□□□□ -0.79
SP140-212ENST00000538494 ARAP3Q8WWN8 1544 aa10.1□□□□□ -0.79
SP140-212ENST00000538494 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
SP140-212ENST00000538494 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
SP140-212ENST00000538494 CARMIL2Q6F5E8 1435 aa10.07□□□□□ -0.8
SP140-212ENST00000538494 HSPA2P54652 639 aa10.06□□□□□ -0.8
SP140-212ENST00000538494 BCORL1Q5H9F3 1711 aa10.06□□□□□ -0.8
SP140-212ENST00000538494 CD109Q6YHK3 1445 aa10.06□□□□□ -0.8
SP140-212ENST00000538494 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
SP140-212ENST00000538494 CFAP43Q8NDM7 1665 aa10.05□□□□□ -0.8
SP140-212ENST00000538494 IGF1RP08069 1367 aa10.04□□□□□ -0.8
SP140-212ENST00000538494 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
SP140-212ENST00000538494 MICALL2Q8IY33 904 aa10.04□□□□□ -0.8
SP140-212ENST00000538494 ZCCHC11Q5TAX3 1644 aaKnown RBP10.04□□□□□ -0.8
SP140-212ENST00000538494 MADDQ8WXG6 1647 aa10.03□□□□□ -0.8
SP140-212ENST00000538494 PHLDB1Q86UU1 1377 aa10.02□□□□□ -0.8
SP140-212ENST00000538494 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
SP140-212ENST00000538494 DISP1Q96F81 1524 aa10.01□□□□□ -0.81
SP140-212ENST00000538494 ZNF687Q8N1G0 1237 aa10□□□□□ -0.81
SP140-212ENST00000538494 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
SP140-212ENST00000538494 IQSEC2Q5JU85 1478 aa9.99□□□□□ -0.81
SP140-212ENST00000538494 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
SP140-212ENST00000538494 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
SP140-212ENST00000538494 SOX12O15370 315 aa9.98□□□□□ -0.81
SP140-212ENST00000538494 MS4A4AQ96JQ5 239 aa9.96□□□□□ -0.82
SP140-212ENST00000538494 STRCQ7RTU9 1775 aa9.96□□□□□ -0.82
SP140-212ENST00000538494 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
SP140-212ENST00000538494 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
SP140-212ENST00000538494 TTBK1Q5TCY1 1321 aaPredicted RBP9.95□□□□□ -0.82
SP140-212ENST00000538494 IQGAP2Q13576 1575 aa9.94□□□□□ -0.82
SP140-212ENST00000538494 RIMS1Q86UR5 1692 aaKnown RBP9.93□□□□□ -0.82
SP140-212ENST00000538494 LTBP4Q8N2S1 1624 aa9.93□□□□□ -0.82
SP140-212ENST00000538494 PTPRTO14522 1441 aa9.93□□□□□ -0.82
SP140-212ENST00000538494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.93□□□□□ -0.82
SP140-212ENST00000538494 RIOK3O14730 519 aaKnown RBP9.93□□□□□ -0.82
SP140-212ENST00000538494 ANKRD13DQ6ZTN6 518 aa9.93□□□□□ -0.82
SP140-212ENST00000538494 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
SP140-212ENST00000538494 UGGT2Q9NYU1 1516 aa9.92□□□□□ -0.82
SP140-212ENST00000538494 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
SP140-212ENST00000538494 KCNH8Q96L42 1107 aa9.91□□□□□ -0.82
SP140-212ENST00000538494 NEO1Q92859 1461 aa9.91□□□□□ -0.82
SP140-212ENST00000538494 CARMIL1Q5VZK9 1371 aa9.9□□□□□ -0.82
SP140-212ENST00000538494 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
SP140-212ENST00000538494 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.82
SP140-212ENST00000538494 RNF25Q96BH1 459 aaPredicted RBP9.9□□□□□ -0.82
SP140-212ENST00000538494 SETD1BQ9UPS6 1966 aaKnown RBP9.9□□□□□ -0.83
SP140-212ENST00000538494 ARID4BQ4LE39 1312 aaPredicted RBP9.89□□□□□ -0.83
SP140-212ENST00000538494 VGFO15240 615 aaPredicted RBP9.89□□□□□ -0.83
SP140-212ENST00000538494 PTGER2P43116 358 aa9.89□□□□□ -0.83
SP140-212ENST00000538494 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
SP140-212ENST00000538494 KIF27Q86VH2 1401 aa9.88□□□□□ -0.83
SP140-212ENST00000538494 KIAA0556O60303 1618 aa9.87□□□□□ -0.83
SP140-212ENST00000538494 ZNF316A6NFI3 1004 aaPredicted RBP9.87□□□□□ -0.83
SP140-212ENST00000538494 ARHGEF40Q8TER5 1519 aa9.87□□□□□ -0.83
SP140-212ENST00000538494 ABCA9Q8IUA7 1624 aa9.86□□□□□ -0.83
SP140-212ENST00000538494 ABCA8O94911 1581 aa9.86□□□□□ -0.83
SP140-212ENST00000538494 POGZQ7Z3K3 1410 aa9.86□□□□□ -0.83
SP140-212ENST00000538494 PREX1Q8TCU6 1659 aa9.86□□□□□ -0.83
SP140-212ENST00000538494 FHOD3Q2V2M9 1422 aa9.85□□□□□ -0.83
SP140-212ENST00000538494 NLRP6P59044 892 aa9.84□□□□□ -0.83
SP140-212ENST00000538494 SIGLEC1Q9BZZ2 1709 aa9.83□□□□□ -0.84
SP140-212ENST00000538494 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
SP140-212ENST00000538494 FANCAO15360 1455 aa9.83□□□□□ -0.84
SP140-212ENST00000538494 MED1Q15648 1581 aaPredicted RBP9.82□□□□□ -0.84
SP140-212ENST00000538494 ARHGEF12Q9NZN5 1544 aa9.82□□□□□ -0.84
SP140-212ENST00000538494 RICTORQ6R327 1708 aa9.81□□□□□ -0.84
SP140-212ENST00000538494 AKNAQ7Z591 1439 aa9.81□□□□□ -0.84
SP140-212ENST00000538494 MAGI2Q86UL8 1455 aa9.8□□□□□ -0.84
SP140-212ENST00000538494 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
SP140-212ENST00000538494 NUDT7P0C024 238 aa9.79□□□□□ -0.84
SP140-212ENST00000538494 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
SP140-212ENST00000538494 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
SP140-212ENST00000538494 DENND4BO75064 1496 aaPredicted RBP9.79□□□□□ -0.84
SP140-212ENST00000538494 ATP10BO94823 1461 aa9.79□□□□□ -0.84
SP140-212ENST00000538494 FER1L4A9Z1Z3 1794 aa9.78□□□□□ -0.84
SP140-212ENST00000538494 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
SP140-212ENST00000538494 STK24Q9Y6E0 443 aa9.77□□□□□ -0.85
SP140-212ENST00000538494 NCOA1Q15788 1441 aa9.76□□□□□ -0.85
SP140-212ENST00000538494 C2orf72A6NCS6 295 aa9.76□□□□□ -0.85
SP140-212ENST00000538494 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
SP140-212ENST00000538494 CEBPAP49715 358 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms