RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 E9PCH4 1651 aa18.95■□□□□ 0.62
CLPB-209ENST00000538039 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
CLPB-209ENST00000538039 PER1O15534 1290 aaPredicted RBP18.94■□□□□ 0.62
CLPB-209ENST00000538039 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
CLPB-209ENST00000538039 PLIN1O60240 522 aa18.93■□□□□ 0.62
CLPB-209ENST00000538039 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
CLPB-209ENST00000538039 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
CLPB-209ENST00000538039 BRD4O60885 1362 aaPredicted RBP18.92■□□□□ 0.62
CLPB-209ENST00000538039 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
CLPB-209ENST00000538039 ABCA8O94911 1581 aa18.91■□□□□ 0.62
CLPB-209ENST00000538039 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
CLPB-209ENST00000538039 PTPRGP23470 1445 aa18.91■□□□□ 0.62
CLPB-209ENST00000538039 KDM5DQ9BY66 1539 aa18.91■□□□□ 0.62
CLPB-209ENST00000538039 RCAN3Q9UKA8 241 aa18.89■□□□□ 0.62
CLPB-209ENST00000538039 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
CLPB-209ENST00000538039 PLA2R1Q13018 1463 aa18.89■□□□□ 0.61
CLPB-209ENST00000538039 TSPY4P0CV99 314 aa18.89■□□□□ 0.61
CLPB-209ENST00000538039 TSPY10P0CW01 314 aa18.89■□□□□ 0.61
CLPB-209ENST00000538039 CC2D1BQ5T0F9 858 aaKnown RBP18.89■□□□□ 0.61
CLPB-209ENST00000538039 RALBP1Q15311 655 aa18.88■□□□□ 0.61
CLPB-209ENST00000538039 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
CLPB-209ENST00000538039 DISP3Q9P2K9 1392 aa18.88■□□□□ 0.61
CLPB-209ENST00000538039 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
CLPB-209ENST00000538039 SHANK2Q9UPX8 1470 aa18.87■□□□□ 0.61
CLPB-209ENST00000538039 PRAG1Q86YV5 1406 aa18.86■□□□□ 0.61
CLPB-209ENST00000538039 FAM135AQ9P2D6 1515 aa18.86■□□□□ 0.61
CLPB-209ENST00000538039 TESK2Q96S53 571 aa18.86■□□□□ 0.61
CLPB-209ENST00000538039 NUP160Q12769 1436 aa18.86■□□□□ 0.61
CLPB-209ENST00000538039 TRPM1Q7Z4N2 1603 aa18.86■□□□□ 0.61
CLPB-209ENST00000538039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
CLPB-209ENST00000538039 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
CLPB-209ENST00000538039 CARMIL2Q6F5E8 1435 aa18.84■□□□□ 0.61
CLPB-209ENST00000538039 ANP32AP39687 249 aaKnown RBP18.83■□□□□ 0.61
CLPB-209ENST00000538039 NLRP13Q86W25 1043 aa18.83■□□□□ 0.61
CLPB-209ENST00000538039 CDC42BPBQ9Y5S2 1711 aa18.82■□□□□ 0.6
CLPB-209ENST00000538039 C20orf194Q5TEA3 1177 aa18.82■□□□□ 0.6
CLPB-209ENST00000538039 A2MP01023 1474 aa18.82■□□□□ 0.6
CLPB-209ENST00000538039 PANK3Q9H999 370 aa18.81■□□□□ 0.6
CLPB-209ENST00000538039 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
CLPB-209ENST00000538039 PDE4AP27815 886 aa18.81■□□□□ 0.6
CLPB-209ENST00000538039 KTN1Q86UP2 1357 aaKnown RBP18.8■□□□□ 0.6
CLPB-209ENST00000538039 CCDC144AA2RUR9 1427 aa18.78■□□□□ 0.6
CLPB-209ENST00000538039 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
CLPB-209ENST00000538039 BACH2Q9BYV9 841 aa18.77■□□□□ 0.59
CLPB-209ENST00000538039 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
CLPB-209ENST00000538039 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
CLPB-209ENST00000538039 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
CLPB-209ENST00000538039 COL17A1Q9UMD9 1497 aaPredicted RBP18.75■□□□□ 0.59
CLPB-209ENST00000538039 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
CLPB-209ENST00000538039 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
CLPB-209ENST00000538039 GPRASP1Q5JY77 1395 aa18.74■□□□□ 0.59
CLPB-209ENST00000538039 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
CLPB-209ENST00000538039 PLEKHH2Q8IVE3 1493 aa18.73■□□□□ 0.59
CLPB-209ENST00000538039 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
CLPB-209ENST00000538039 TCERG1O14776 1098 aaKnown RBP18.72■□□□□ 0.59
CLPB-209ENST00000538039 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
CLPB-209ENST00000538039 PRDM15P57071 1507 aaPredicted RBP18.72■□□□□ 0.59
CLPB-209ENST00000538039 ERBINQ96RT1 1412 aa18.71■□□□□ 0.58
CLPB-209ENST00000538039 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
CLPB-209ENST00000538039 MYT1LQ9UL68 1186 aa18.7■□□□□ 0.58
CLPB-209ENST00000538039 PREX2Q70Z35 1606 aa18.7■□□□□ 0.58
CLPB-209ENST00000538039 MAGI2Q86UL8 1455 aa18.69■□□□□ 0.58
CLPB-209ENST00000538039 PDE3BQ13370 1112 aa18.69■□□□□ 0.58
CLPB-209ENST00000538039 PLEKHH1Q9ULM0 1364 aa18.69■□□□□ 0.58
CLPB-209ENST00000538039 SLC4A3P48751 1232 aa18.66■□□□□ 0.58
CLPB-209ENST00000538039 UNC13BO14795 1591 aa18.66■□□□□ 0.58
CLPB-209ENST00000538039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.58
CLPB-209ENST00000538039 WDR7Q9Y4E6 1490 aa18.64■□□□□ 0.57
CLPB-209ENST00000538039 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
CLPB-209ENST00000538039 ARHGAP5Q13017 1502 aa18.63■□□□□ 0.57
CLPB-209ENST00000538039 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
CLPB-209ENST00000538039 ZMYM4Q5VZL5 1548 aa18.63■□□□□ 0.57
CLPB-209ENST00000538039 DUSP27Q5VZP5 1158 aa18.63■□□□□ 0.57
CLPB-209ENST00000538039 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
CLPB-209ENST00000538039 TMF1P82094 1093 aa18.61■□□□□ 0.57
CLPB-209ENST00000538039 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
CLPB-209ENST00000538039 NEFMP07197 916 aa18.61■□□□□ 0.57
CLPB-209ENST00000538039 MS4A1P11836 297 aa18.61■□□□□ 0.57
CLPB-209ENST00000538039 IQGAP3Q86VI3 1631 aa18.61■□□□□ 0.57
CLPB-209ENST00000538039 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
CLPB-209ENST00000538039 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
CLPB-209ENST00000538039 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
CLPB-209ENST00000538039 LAMC1P11047 1609 aa18.6■□□□□ 0.57
CLPB-209ENST00000538039 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
CLPB-209ENST00000538039 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
CLPB-209ENST00000538039 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
CLPB-209ENST00000538039 ZNF521Q96K83 1311 aa18.58■□□□□ 0.57
CLPB-209ENST00000538039 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
CLPB-209ENST00000538039 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
CLPB-209ENST00000538039 MAST1Q9Y2H9 1570 aa18.56■□□□□ 0.56
CLPB-209ENST00000538039 RNF17Q9BXT8 1623 aaKnown RBP18.55■□□□□ 0.56
CLPB-209ENST00000538039 RTN4Q9NQC3 1192 aaKnown RBP18.53■□□□□ 0.56
CLPB-209ENST00000538039 ATP10AO60312 1499 aa18.53■□□□□ 0.56
CLPB-209ENST00000538039 TRAPPC8Q9Y2L5 1435 aa18.53■□□□□ 0.56
CLPB-209ENST00000538039 C8orf34Q49A92 452 aa18.53■□□□□ 0.56
CLPB-209ENST00000538039 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
CLPB-209ENST00000538039 PLXNC1O60486 1568 aa18.52■□□□□ 0.56
CLPB-209ENST00000538039 BCAR3O75815 825 aa18.52■□□□□ 0.55
CLPB-209ENST00000538039 INSRP06213 1382 aa18.52■□□□□ 0.55
CLPB-209ENST00000538039 MADDQ8WXG6 1647 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms