RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
NECAP1-203ENST00000537796 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
NECAP1-203ENST00000537796 PLA2R1Q13018 1463 aa10.12□□□□□ -0.79
NECAP1-203ENST00000537796 KDM5CP41229 1560 aa10.12□□□□□ -0.79
NECAP1-203ENST00000537796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.12□□□□□ -0.79
NECAP1-203ENST00000537796 TRAPPC8Q9Y2L5 1435 aa10.1□□□□□ -0.79
NECAP1-203ENST00000537796 MSH5O43196 834 aa10.1□□□□□ -0.79
NECAP1-203ENST00000537796 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
NECAP1-203ENST00000537796 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
NECAP1-203ENST00000537796 PANK3Q9H999 370 aa10.1□□□□□ -0.79
NECAP1-203ENST00000537796 SHANK2Q9UPX8 1470 aa10.09□□□□□ -0.79
NECAP1-203ENST00000537796 DISP3Q9P2K9 1392 aa10.09□□□□□ -0.79
NECAP1-203ENST00000537796 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
NECAP1-203ENST00000537796 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
NECAP1-203ENST00000537796 UHRF1BP1Q6BDS2 1440 aa10.08□□□□□ -0.8
NECAP1-203ENST00000537796 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
NECAP1-203ENST00000537796 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
NECAP1-203ENST00000537796 PRAG1Q86YV5 1406 aa10.07□□□□□ -0.8
NECAP1-203ENST00000537796 A2MP01023 1474 aa10.07□□□□□ -0.8
NECAP1-203ENST00000537796 KIF3BO15066 747 aa10.07□□□□□ -0.8
NECAP1-203ENST00000537796 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
NECAP1-203ENST00000537796 RSPH4AQ5TD94 716 aa10.06□□□□□ -0.8
NECAP1-203ENST00000537796 TESK2Q96S53 571 aa10.06□□□□□ -0.8
NECAP1-203ENST00000537796 ANP32EQ9BTT0 268 aa10.06□□□□□ -0.8
NECAP1-203ENST00000537796 CHGAP10645 457 aaKnown RBP10.05□□□□□ -0.8
NECAP1-203ENST00000537796 ARHGEF5Q12774 1597 aa10.05□□□□□ -0.8
NECAP1-203ENST00000537796 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
NECAP1-203ENST00000537796 PLIN1O60240 522 aa10.05□□□□□ -0.8
NECAP1-203ENST00000537796 PER1O15534 1290 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-203ENST00000537796 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
NECAP1-203ENST00000537796 KDM5DQ9BY66 1539 aa10.04□□□□□ -0.8
NECAP1-203ENST00000537796 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
NECAP1-203ENST00000537796 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-203ENST00000537796 CCDC136Q96JN2 1154 aa10.04□□□□□ -0.8
NECAP1-203ENST00000537796 PLCH2O75038 1416 aa10.02□□□□□ -0.81
NECAP1-203ENST00000537796 KTN1Q86UP2 1357 aaKnown RBP10.02□□□□□ -0.81
NECAP1-203ENST00000537796 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.81
NECAP1-203ENST00000537796 POLR1AO95602 1720 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-203ENST00000537796 RALBP1Q15311 655 aa10.01□□□□□ -0.81
NECAP1-203ENST00000537796 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
NECAP1-203ENST00000537796 SMG6Q86US8 1419 aaKnown RBP10.01□□□□□ -0.81
NECAP1-203ENST00000537796 TMF1P82094 1093 aa10.01□□□□□ -0.81
NECAP1-203ENST00000537796 CFAP70Q5T0N1 1121 aa10.01□□□□□ -0.81
NECAP1-203ENST00000537796 NLRP13Q86W25 1043 aa10.01□□□□□ -0.81
NECAP1-203ENST00000537796 ARID4BQ4LE39 1312 aaPredicted RBP10□□□□□ -0.81
NECAP1-203ENST00000537796 ZCCHC11Q5TAX3 1644 aaKnown RBP10□□□□□ -0.81
NECAP1-203ENST00000537796 ERBINQ96RT1 1412 aa10□□□□□ -0.81
NECAP1-203ENST00000537796 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
NECAP1-203ENST00000537796 GGT6Q6P531 493 aa9.99□□□□□ -0.81
NECAP1-203ENST00000537796 CCDC146Q8IYE0 955 aa9.99□□□□□ -0.81
NECAP1-203ENST00000537796 ADAMTS8Q9UP79 889 aa9.99□□□□□ -0.81
NECAP1-203ENST00000537796 SHROOM2Q13796 1616 aa9.98□□□□□ -0.81
NECAP1-203ENST00000537796 TRPM1Q7Z4N2 1603 aa9.98□□□□□ -0.81
NECAP1-203ENST00000537796 TNNT2P45379 298 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-203ENST00000537796 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-203ENST00000537796 UGGT1Q9NYU2 1555 aa9.98□□□□□ -0.81
NECAP1-203ENST00000537796 RCAN3Q9UKA8 241 aa9.97□□□□□ -0.81
NECAP1-203ENST00000537796 ADGRF5Q8IZF2 1346 aa9.97□□□□□ -0.81
NECAP1-203ENST00000537796 LRPPRCP42704 1394 aaKnown RBP9.97□□□□□ -0.81
NECAP1-203ENST00000537796 DUOX2Q9NRD8 1548 aa9.97□□□□□ -0.81
NECAP1-203ENST00000537796 PARD3Q8TEW0 1356 aa9.97□□□□□ -0.81
NECAP1-203ENST00000537796 KNSTRNQ9Y448 316 aa9.97□□□□□ -0.81
NECAP1-203ENST00000537796 TMEM132EQ6IEE7 984 aa9.96□□□□□ -0.82
NECAP1-203ENST00000537796 RRP1P56182 461 aaKnown RBP9.95□□□□□ -0.82
NECAP1-203ENST00000537796 CFAP65Q6ZU64 1925 aaKnown RBP9.95□□□□□ -0.82
NECAP1-203ENST00000537796 UNC13BO14795 1591 aa9.95□□□□□ -0.82
NECAP1-203ENST00000537796 C20orf194Q5TEA3 1177 aa9.95□□□□□ -0.82
NECAP1-203ENST00000537796 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
NECAP1-203ENST00000537796 NPM2Q86SE8 214 aaKnown RBP9.95□□□□□ -0.82
NECAP1-203ENST00000537796 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
NECAP1-203ENST00000537796 GPRASP1Q5JY77 1395 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 ABCC1P33527 1531 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 FANCAO15360 1455 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
NECAP1-203ENST00000537796 TRAK1Q9UPV9 953 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 PPP2R1AP30153 589 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 ATP10AO60312 1499 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 ERICH6BQ5W0A0 696 aa9.94□□□□□ -0.82
NECAP1-203ENST00000537796 IQGAP3Q86VI3 1631 aa9.93□□□□□ -0.82
NECAP1-203ENST00000537796 MAST1Q9Y2H9 1570 aa9.93□□□□□ -0.82
NECAP1-203ENST00000537796 PAK3O75914 559 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-203ENST00000537796 RNF123Q5XPI4 1314 aa9.92□□□□□ -0.82
NECAP1-203ENST00000537796 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
NECAP1-203ENST00000537796 E9PCH4 1651 aa9.92□□□□□ -0.82
NECAP1-203ENST00000537796 ADGRL1O94910 1474 aa9.92□□□□□ -0.82
NECAP1-203ENST00000537796 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
NECAP1-203ENST00000537796 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
NECAP1-203ENST00000537796 WDR43Q15061 677 aaKnown RBP eCLIP9.91□□□□□ -0.82
NECAP1-203ENST00000537796 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
NECAP1-203ENST00000537796 PRDM15P57071 1507 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-203ENST00000537796 ASXL2Q76L83 1435 aa9.91□□□□□ -0.82
NECAP1-203ENST00000537796 WDR7Q9Y4E6 1490 aa9.91□□□□□ -0.82
NECAP1-203ENST00000537796 NEUROD2Q15784 382 aa9.91□□□□□ -0.82
NECAP1-203ENST00000537796 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
NECAP1-203ENST00000537796 NBR1Q14596 966 aa9.9□□□□□ -0.82
NECAP1-203ENST00000537796 ZFYVE16Q7Z3T8 1539 aa9.9□□□□□ -0.82
NECAP1-203ENST00000537796 CARD14Q9BXL6 1004 aa9.9□□□□□ -0.82
NECAP1-203ENST00000537796 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms