RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.23
CPSF7-218ENST00000537641 E9PCH4 1651 aa16.46■□□□□ 0.23
CPSF7-218ENST00000537641 RSPH4AQ5TD94 716 aa16.45■□□□□ 0.22
CPSF7-218ENST00000537641 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
CPSF7-218ENST00000537641 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
CPSF7-218ENST00000537641 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
CPSF7-218ENST00000537641 ZCCHC11Q5TAX3 1644 aaKnown RBP16.43■□□□□ 0.22
CPSF7-218ENST00000537641 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
CPSF7-218ENST00000537641 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
CPSF7-218ENST00000537641 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.22
CPSF7-218ENST00000537641 PKD2Q13563 968 aa16.42■□□□□ 0.22
CPSF7-218ENST00000537641 PLEKHH2Q8IVE3 1493 aa16.41■□□□□ 0.22
CPSF7-218ENST00000537641 NOP58Q9Y2X3 529 aaKnown RBP16.41■□□□□ 0.22
CPSF7-218ENST00000537641 NUP155O75694 1391 aa16.41■□□□□ 0.22
CPSF7-218ENST00000537641 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
CPSF7-218ENST00000537641 UNC13BO14795 1591 aa16.38■□□□□ 0.21
CPSF7-218ENST00000537641 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
CPSF7-218ENST00000537641 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
CPSF7-218ENST00000537641 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
CPSF7-218ENST00000537641 CCDC136Q96JN2 1154 aa16.36■□□□□ 0.21
CPSF7-218ENST00000537641 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
CPSF7-218ENST00000537641 PLCH2O75038 1416 aa16.33■□□□□ 0.2
CPSF7-218ENST00000537641 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
CPSF7-218ENST00000537641 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
CPSF7-218ENST00000537641 IQGAP3Q86VI3 1631 aa16.31■□□□□ 0.2
CPSF7-218ENST00000537641 RALBP1Q15311 655 aa16.31■□□□□ 0.2
CPSF7-218ENST00000537641 ARAP3Q8WWN8 1544 aa16.31■□□□□ 0.2
CPSF7-218ENST00000537641 DUOX2Q9NRD8 1548 aa16.31■□□□□ 0.2
CPSF7-218ENST00000537641 DEKP35659 375 aaKnown RBP16.31■□□□□ 0.2
CPSF7-218ENST00000537641 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
CPSF7-218ENST00000537641 LAMC1P11047 1609 aa16.3■□□□□ 0.2
CPSF7-218ENST00000537641 ABCC1P33527 1531 aa16.3■□□□□ 0.2
CPSF7-218ENST00000537641 IPO9Q96P70 1041 aaKnown RBP16.3■□□□□ 0.2
CPSF7-218ENST00000537641 ZMYM4Q5VZL5 1548 aa16.3■□□□□ 0.2
CPSF7-218ENST00000537641 TRPM1Q7Z4N2 1603 aa16.29■□□□□ 0.2
CPSF7-218ENST00000537641 INSRP06213 1382 aa16.28■□□□□ 0.2
CPSF7-218ENST00000537641 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
CPSF7-218ENST00000537641 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
CPSF7-218ENST00000537641 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
CPSF7-218ENST00000537641 MAGI2Q86UL8 1455 aa16.27■□□□□ 0.2
CPSF7-218ENST00000537641 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.19
CPSF7-218ENST00000537641 EFCAB2Q5VUJ9 269 aa16.26■□□□□ 0.19
CPSF7-218ENST00000537641 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
CPSF7-218ENST00000537641 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
CPSF7-218ENST00000537641 PDE3BQ13370 1112 aa16.25■□□□□ 0.19
CPSF7-218ENST00000537641 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
CPSF7-218ENST00000537641 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-218ENST00000537641 CCDC144AA2RUR9 1427 aa16.22■□□□□ 0.19
CPSF7-218ENST00000537641 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
CPSF7-218ENST00000537641 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
CPSF7-218ENST00000537641 ABCA9Q8IUA7 1624 aa16.21■□□□□ 0.19
CPSF7-218ENST00000537641 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
CPSF7-218ENST00000537641 ATP10AO60312 1499 aa16.2■□□□□ 0.18
CPSF7-218ENST00000537641 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
CPSF7-218ENST00000537641 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
CPSF7-218ENST00000537641 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
CPSF7-218ENST00000537641 NLRP13Q86W25 1043 aa16.19■□□□□ 0.18
CPSF7-218ENST00000537641 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-218ENST00000537641 PLA2R1Q13018 1463 aa16.19■□□□□ 0.18
CPSF7-218ENST00000537641 COL17A1Q9UMD9 1497 aaPredicted RBP16.19■□□□□ 0.18
CPSF7-218ENST00000537641 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
CPSF7-218ENST00000537641 GPRASP1Q5JY77 1395 aa16.19■□□□□ 0.18
CPSF7-218ENST00000537641 ZFYVE16Q7Z3T8 1539 aa16.18■□□□□ 0.18
CPSF7-218ENST00000537641 MS4A1P11836 297 aa16.18■□□□□ 0.18
CPSF7-218ENST00000537641 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-218ENST00000537641 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
CPSF7-218ENST00000537641 BLMP54132 1417 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-218ENST00000537641 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-218ENST00000537641 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
CPSF7-218ENST00000537641 NBR1Q14596 966 aa16.16■□□□□ 0.18
CPSF7-218ENST00000537641 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
CPSF7-218ENST00000537641 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
CPSF7-218ENST00000537641 INO80Q9ULG1 1556 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-218ENST00000537641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.182e-8■□□□□ 11
CPSF7-218ENST00000537641 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
CPSF7-218ENST00000537641 EXOC6Q8TAG9 804 aa16.14■□□□□ 0.17
CPSF7-218ENST00000537641 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
CPSF7-218ENST00000537641 RNF17Q9BXT8 1623 aaKnown RBP16.13■□□□□ 0.17
CPSF7-218ENST00000537641 FANCAO15360 1455 aa16.13■□□□□ 0.17
CPSF7-218ENST00000537641 A2MP01023 1474 aa16.13■□□□□ 0.17
CPSF7-218ENST00000537641 ATP7AQ04656 1500 aa16.12■□□□□ 0.17
CPSF7-218ENST00000537641 TET3O43151 1660 aa16.1■□□□□ 0.17
CPSF7-218ENST00000537641 SPHKAPQ2M3C7 1700 aa16.1■□□□□ 0.17
CPSF7-218ENST00000537641 CEP152O94986 1710 aa16.09■□□□□ 0.17
CPSF7-218ENST00000537641 PDE4AP27815 886 aa16.09■□□□□ 0.17
CPSF7-218ENST00000537641 BACH2Q9BYV9 841 aa16.09■□□□□ 0.17
CPSF7-218ENST00000537641 PER1O15534 1290 aaPredicted RBP16.08■□□□□ 0.17
CPSF7-218ENST00000537641 ASXL2Q76L83 1435 aa16.08■□□□□ 0.17
CPSF7-218ENST00000537641 USP35Q9P2H5 1018 aa16.08■□□□□ 0.17
CPSF7-218ENST00000537641 TRPM2O94759 1503 aa16.08■□□□□ 0.16
CPSF7-218ENST00000537641 ADGRL1O94910 1474 aa16.08■□□□□ 0.16
CPSF7-218ENST00000537641 VWDEQ8N2E2 1590 aa16.07■□□□□ 0.16
CPSF7-218ENST00000537641 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
CPSF7-218ENST00000537641 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
CPSF7-218ENST00000537641 RGL3Q3MIN7 710 aa16.05■□□□□ 0.16
CPSF7-218ENST00000537641 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
CPSF7-218ENST00000537641 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-218ENST00000537641 DDRGK1Q96HY6 314 aa16.04■□□□□ 0.16
CPSF7-218ENST00000537641 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
CPSF7-218ENST00000537641 PTPRTO14522 1441 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms