RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	CHMP5	Q9NZZ3	219 aa		13.44	□□□□□ -0.26
POLE-210	ENST00000537064	NUP155	O75694	1391 aa		13.44	□□□□□ -0.26
POLE-210	ENST00000537064	SENP3-EIF4A1	A0A087X0R7	540 aa		13.44	□□□□□ -0.26
POLE-210	ENST00000537064	BACH2	Q9BYV9	841 aa		13.44	□□□□□ -0.26
POLE-210	ENST00000537064	KIF7	Q2M1P5	1343 aa		13.43	□□□□□ -0.26
POLE-210	ENST00000537064	RSPH4A	Q5TD94	716 aa		13.43	□□□□□ -0.26
POLE-210	ENST00000537064	CRBN	Q96SW2	442 aa		13.43	□□□□□ -0.26
POLE-210	ENST00000537064	KANK1	Q14678	1352 aa		13.42	□□□□□ -0.26
POLE-210	ENST00000537064	NINL	Q9Y2I6	1382 aa		13.42	□□□□□ -0.26
POLE-210	ENST00000537064	EHBP1L1	Q8N3D4	1523 aa		13.42	□□□□□ -0.26
POLE-210	ENST00000537064	RRP9	O43818	475 aa	Known RBP	13.42	□□□□□ -0.26
POLE-210	ENST00000537064	CALR	P27797	417 aa	Known RBP	13.42	□□□□□ -0.26
POLE-210	ENST00000537064	PLEKHH2	Q8IVE3	1493 aa		13.41	□□□□□ -0.26
POLE-210	ENST00000537064	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-210	ENST00000537064	PAK3	O75914	559 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-210	ENST00000537064	FOXD1	Q16676	465 aa		13.4	□□□□□ -0.26
POLE-210	ENST00000537064	NEUROD2	Q15784	382 aa		13.39	□□□□□ -0.27
POLE-210	ENST00000537064	MORC1	Q86VD1	984 aa		13.39	□□□□□ -0.27
POLE-210	ENST00000537064	C14orf37	Q86TY3	774 aa		13.39	□□□□□ -0.27
POLE-210	ENST00000537064	SPRYD3	Q8NCJ5	442 aa		13.39	□□□□□ -0.27
POLE-210	ENST00000537064	PKNOX2	Q96KN3	472 aa		13.38	□□□□□ -0.27
POLE-210	ENST00000537064	TNNT3	P45378	269 aa	Predicted RBP	13.37	□□□□□ -0.27
POLE-210	ENST00000537064	MFAP1	P55081	439 aa	Known RBP	13.37	□□□□□ -0.27
POLE-210	ENST00000537064	CARMIL2	Q6F5E8	1435 aa		13.37	□□□□□ -0.27
POLE-210	ENST00000537064	ST18	O60284	1047 aa		13.37	□□□□□ -0.27
POLE-210	ENST00000537064	CCDC144A	A2RUR9	1427 aa		13.36	□□□□□ -0.27
POLE-210	ENST00000537064	NCOA2	Q15596	1464 aa		13.36	□□□□□ -0.27
POLE-210	ENST00000537064	IL27	Q8NEV9	243 aa		13.36	□□□□□ -0.27
POLE-210	ENST00000537064	CADPS	Q9ULU8	1353 aa		13.36	□□□□□ -0.27
POLE-210	ENST00000537064	AKNA	Q7Z591	1439 aa		13.36	□□□□□ -0.27
POLE-210	ENST00000537064	UBE2Q2	Q8WVN8	375 aa		13.36	□□□□□ -0.27
POLE-210	ENST00000537064	FGD5	Q6ZNL6	1462 aa		13.35	□□□□□ -0.27
POLE-210	ENST00000537064	GOLGA6L4	A6NEF3	574 aa		13.35	□□□□□ -0.27
POLE-210	ENST00000537064	IGF1R	P08069	1367 aa		13.35	□□□□□ -0.27
POLE-210	ENST00000537064	ST20-MTHFS	A0A0A6YYL1	179 aa		13.34	□□□□□ -0.27
POLE-210	ENST00000537064	AQR	O60306	1485 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	4e-7	■■■■■ 31.1
POLE-210	ENST00000537064	HTATSF1	O43719	755 aa	Known RBP	13.34	□□□□□ -0.27
POLE-210	ENST00000537064	ITPRIP	Q8IWB1	547 aa		13.34	□□□□□ -0.27
POLE-210	ENST00000537064	STAC3	Q96MF2	364 aa		13.34	□□□□□ -0.27
POLE-210	ENST00000537064	PLCB2	Q00722	1185 aa		13.34	□□□□□ -0.27
POLE-210	ENST00000537064	BRPF3	Q9ULD4	1205 aa		13.33	□□□□□ -0.28
POLE-210	ENST00000537064	CLSTN1	O94985	981 aa		13.32	□□□□□ -0.28
POLE-210	ENST00000537064	DDX49	Q9Y6V7	483 aa	Known RBP	13.32	□□□□□ -0.28
POLE-210	ENST00000537064	SLC4A3	P48751	1232 aa		13.32	□□□□□ -0.28
POLE-210	ENST00000537064	KIF16B	Q96L93	1317 aa		13.32	□□□□□ -0.28
POLE-210	ENST00000537064	DRC7	Q8IY82	874 aa		13.31	□□□□□ -0.28
POLE-210	ENST00000537064	BIVM-ERCC5	R4GMW8	1640 aa		13.31	□□□□□ -0.28
POLE-210	ENST00000537064	PDS5B	Q9NTI5	1447 aa		13.3	□□□□□ -0.28
POLE-210	ENST00000537064	NUCB2	P80303	420 aa		13.3	□□□□□ -0.28
POLE-210	ENST00000537064	SMC4	Q9NTJ3	1288 aa		13.3	□□□□□ -0.28
POLE-210	ENST00000537064	HECW1	Q76N89	1606 aa		13.3	□□□□□ -0.28
POLE-210	ENST00000537064	C11orf95	C9JLR9	678 aa	Predicted RBP	13.3	□□□□□ -0.28
POLE-210	ENST00000537064	PNISR	Q8TF01	805 aa	Known RBP	13.3	□□□□□ -0.28
POLE-210	ENST00000537064	PLIN1	O60240	522 aa		13.29	□□□□□ -0.28
POLE-210	ENST00000537064	CCDC173	Q0VFZ6	552 aa		13.29	□□□□□ -0.28
POLE-210	ENST00000537064	ZKSCAN2	Q63HK3	967 aa		13.29	□□□□□ -0.28
POLE-210	ENST00000537064	U2SURP	O15042	1029 aa	Known RBP	13.29	□□□□□ -0.28
POLE-210	ENST00000537064	PANK3	Q9H999	370 aa		13.29	□□□□□ -0.28
POLE-210	ENST00000537064	DDX19B	Q9UMR2	479 aa		13.29	□□□□□ -0.28
POLE-210	ENST00000537064	ATP6V1D	Q9Y5K8	247 aa		13.29	□□□□□ -0.28
POLE-210	ENST00000537064	PDE3A	Q14432	1141 aa		13.28	□□□□□ -0.28
POLE-210	ENST00000537064	CLUAP1	Q96AJ1	413 aa		13.28	□□□□□ -0.28
POLE-210	ENST00000537064	HMMR	O75330	724 aa		13.27	□□□□□ -0.29
POLE-210	ENST00000537064	MAPKBP1	O60336	1514 aa		13.27	□□□□□ -0.29
POLE-210	ENST00000537064	NCOA1	Q15788	1441 aa		13.27	□□□□□ -0.29
POLE-210	ENST00000537064	TRAK2	O60296	914 aa		13.26	□□□□□ -0.29
POLE-210	ENST00000537064	NPHP1	O15259	732 aa		13.26	□□□□□ -0.29
POLE-210	ENST00000537064	FRAT2	O75474	233 aa	Predicted RBP	13.26	□□□□□ -0.29
POLE-210	ENST00000537064	CCDC39	Q9UFE4	941 aa		13.26	□□□□□ -0.29
POLE-210	ENST00000537064	NASP	P49321	788 aa	Predicted RBP	13.26	□□□□□ -0.29
POLE-210	ENST00000537064	CHMP4A	Q9BY43	222 aa		13.26	□□□□□ -0.29
POLE-210	ENST00000537064	C22orf23	Q9BZE7	217 aa		13.26	□□□□□ -0.29
POLE-210	ENST00000537064	CUL7	Q14999	1698 aa		13.25	□□□□□ -0.29
POLE-210	ENST00000537064	KIAA1211	Q6ZU35	1233 aa		13.25	□□□□□ -0.29
POLE-210	ENST00000537064	SCAPER	Q9BY12	1400 aa		13.25	□□□□□ -0.29
POLE-210	ENST00000537064	HMGN5	P82970	282 aa	Known RBP	13.25	□□□□□ -0.29
POLE-210	ENST00000537064	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-210	ENST00000537064	PCF11	O94913	1555 aa	Known RBP	13.24	□□□□□ -0.29
POLE-210	ENST00000537064	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-210	ENST00000537064	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.24	□□□□□ -0.29	1e-7	■■■□□ 18.7
POLE-210	ENST00000537064	PTPN23	Q9H3S7	1636 aa		13.24	□□□□□ -0.29
POLE-210	ENST00000537064	PEG3	Q9GZU2	1588 aa		13.24	□□□□□ -0.29
POLE-210	ENST00000537064	LMOD3	Q0VAK6	560 aa		13.24	□□□□□ -0.29
POLE-210	ENST00000537064	TPM3	P06753	285 aa		13.23	□□□□□ -0.29
POLE-210	ENST00000537064	ROCK1	Q13464	1354 aa		13.23	□□□□□ -0.29
POLE-210	ENST00000537064	NAIP	Q13075	1403 aa		13.23	□□□□□ -0.29
POLE-210	ENST00000537064	REC8	O95072	547 aa		13.23	□□□□□ -0.29
POLE-210	ENST00000537064	PRM3	Q9NNZ6	103 aa		13.23	□□□□□ -0.29
POLE-210	ENST00000537064	HMGXB3	Q12766	1538 aa		13.23	□□□□□ -0.29
POLE-210	ENST00000537064	KIAA1107	Q9UPP5	1409 aa		13.22	□□□□□ -0.29
POLE-210	ENST00000537064	TPM4	P67936	248 aa		13.22	□□□□□ -0.29
POLE-210	ENST00000537064	PRDM2	Q13029	1718 aa		13.22	□□□□□ -0.29
POLE-210	ENST00000537064	FANCD2	Q9BXW9	1451 aa		13.22	□□□□□ -0.29
POLE-210	ENST00000537064	PODXL2	Q9NZ53	605 aa		13.22	□□□□□ -0.29
POLE-210	ENST00000537064	KCNJ4	P48050	445 aa		13.21	□□□□□ -0.29
POLE-210	ENST00000537064	DIAPH3	Q9NSV4	1193 aa		13.21	□□□□□ -0.29
POLE-210	ENST00000537064	FAM13B	Q9NYF5	915 aa		13.21	□□□□□ -0.29
POLE-210	ENST00000537064	CFAP43	Q8NDM7	1665 aa		13.21	□□□□□ -0.29
POLE-210	ENST00000537064	NCAPD3	P42695	1498 aa		13.21	□□□□□ -0.3
POLE-210	ENST00000537064	CFTR	P13569	1480 aa		13.2	□□□□□ -0.3

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