RNA–Protein interactions for RNA: ENST00000536189.6

TIMP2-202, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 2 BASIC

Gene TIMP2, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-202ENST00000536189 KIF3BO15066 747 aa13.42□□□□□ -0.26
TIMP2-202ENST00000536189 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
TIMP2-202ENST00000536189 ADGRL1O94910 1474 aa13.41□□□□□ -0.26
TIMP2-202ENST00000536189 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
TIMP2-202ENST00000536189 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
TIMP2-202ENST00000536189 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
TIMP2-202ENST00000536189 ABCC1P33527 1531 aa13.39□□□□□ -0.27
TIMP2-202ENST00000536189 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
TIMP2-202ENST00000536189 SENP3-EIF4A1A0A087X0R7 540 aa13.38□□□□□ -0.27
TIMP2-202ENST00000536189 NUTM2DQ5VT03 806 aaPredicted RBP13.36□□□□□ -0.27
TIMP2-202ENST00000536189 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
TIMP2-202ENST00000536189 CENPBP07199 599 aaPredicted RBP13.35□□□□□ -0.27
TIMP2-202ENST00000536189 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
TIMP2-202ENST00000536189 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
TIMP2-202ENST00000536189 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
TIMP2-202ENST00000536189 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
TIMP2-202ENST00000536189 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
TIMP2-202ENST00000536189 ERBINQ96RT1 1412 aa13.31□□□□□ -0.28
TIMP2-202ENST00000536189 BCANQ96GW7 911 aa13.31□□□□□ -0.28
TIMP2-202ENST00000536189 ARAP3Q8WWN8 1544 aa13.31□□□□□ -0.28
TIMP2-202ENST00000536189 C11orf95C9JLR9 678 aaPredicted RBP13.31□□□□□ -0.28
TIMP2-202ENST00000536189 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
TIMP2-202ENST00000536189 RTEL1-TNFRSF6BF6WH68 1400 aa13.31□□□□□ -0.28
TIMP2-202ENST00000536189 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
TIMP2-202ENST00000536189 ANP32CO43423 234 aa13.29□□□□□ -0.28
TIMP2-202ENST00000536189 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
TIMP2-202ENST00000536189 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
TIMP2-202ENST00000536189 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
TIMP2-202ENST00000536189 KDM5DQ9BY66 1539 aa13.28□□□□□ -0.28
TIMP2-202ENST00000536189 DHX29Q7Z478 1369 aaKnown RBP13.28□□□□□ -0.28
TIMP2-202ENST00000536189 KANK1Q14678 1352 aa13.28□□□□□ -0.28
TIMP2-202ENST00000536189 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
TIMP2-202ENST00000536189 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
TIMP2-202ENST00000536189 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
TIMP2-202ENST00000536189 PLA2R1Q13018 1463 aa13.27□□□□□ -0.28
TIMP2-202ENST00000536189 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
TIMP2-202ENST00000536189 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.29
TIMP2-202ENST00000536189 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
TIMP2-202ENST00000536189 NBPF1Q3BBV0 1214 aa13.25□□□□□ -0.29
TIMP2-202ENST00000536189 USP47Q96K76 1375 aa13.24□□□□□ -0.29
TIMP2-202ENST00000536189 POGZQ7Z3K3 1410 aa13.24□□□□□ -0.29
TIMP2-202ENST00000536189 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
TIMP2-202ENST00000536189 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
TIMP2-202ENST00000536189 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
TIMP2-202ENST00000536189 UNC13BO14795 1591 aa13.23□□□□□ -0.29
TIMP2-202ENST00000536189 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
TIMP2-202ENST00000536189 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
TIMP2-202ENST00000536189 A2MP01023 1474 aa13.21□□□□□ -0.29
TIMP2-202ENST00000536189 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
TIMP2-202ENST00000536189 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
TIMP2-202ENST00000536189 IQGAP3Q86VI3 1631 aa13.19□□□□□ -0.3
TIMP2-202ENST00000536189 INO80Q9ULG1 1556 aaPredicted RBP13.19□□□□□ -0.3
TIMP2-202ENST00000536189 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
TIMP2-202ENST00000536189 MAGI2Q86UL8 1455 aa13.18□□□□□ -0.3
TIMP2-202ENST00000536189 SPATA31E1Q6ZUB1 1445 aa13.18□□□□□ -0.3
TIMP2-202ENST00000536189 ARXQ96QS3 562 aa13.17□□□□□ -0.3
TIMP2-202ENST00000536189 NEO1Q92859 1461 aa13.17□□□□□ -0.3
TIMP2-202ENST00000536189 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
TIMP2-202ENST00000536189 YEATS2Q9ULM3 1422 aa13.17□□□□□ -0.3
TIMP2-202ENST00000536189 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
TIMP2-202ENST00000536189 KCNA4P22459 653 aa13.16□□□□□ -0.3
TIMP2-202ENST00000536189 UHRF1BP1Q6BDS2 1440 aa13.16□□□□□ -0.3
TIMP2-202ENST00000536189 ATP10AO60312 1499 aa13.16□□□□□ -0.3
TIMP2-202ENST00000536189 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
TIMP2-202ENST00000536189 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
TIMP2-202ENST00000536189 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
TIMP2-202ENST00000536189 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
TIMP2-202ENST00000536189 UGGT1Q9NYU2 1555 aa13.12□□□□□ -0.31
TIMP2-202ENST00000536189 TSPOAP1O95153 1857 aa13.12□□□□□ -0.31
TIMP2-202ENST00000536189 HECW2Q9P2P5 1572 aa13.12□□□□□ -0.31
TIMP2-202ENST00000536189 E9PCH4 1651 aa13.12□□□□□ -0.31
TIMP2-202ENST00000536189 KDM5CP41229 1560 aa13.12□□□□□ -0.31
TIMP2-202ENST00000536189 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
TIMP2-202ENST00000536189 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
TIMP2-202ENST00000536189 PTPRTO14522 1441 aa13.1□□□□□ -0.31
TIMP2-202ENST00000536189 CFAP70Q5T0N1 1121 aa13.1□□□□□ -0.31
TIMP2-202ENST00000536189 STK26Q9P289 416 aa13.1□□□□□ -0.31
TIMP2-202ENST00000536189 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
TIMP2-202ENST00000536189 ADGRF5Q8IZF2 1346 aa13.09□□□□□ -0.31
TIMP2-202ENST00000536189 FRMPD1Q5SYB0 1578 aa13.09□□□□□ -0.31
TIMP2-202ENST00000536189 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
TIMP2-202ENST00000536189 DIP2BQ9P265 1576 aa13.09□□□□□ -0.31
TIMP2-202ENST00000536189 NPATQ14207 1427 aa13.09□□□□□ -0.31
TIMP2-202ENST00000536189 ABCA6Q8N139 1617 aa13.09□□□□□ -0.31
TIMP2-202ENST00000536189 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.31
TIMP2-202ENST00000536189 MROH1Q8NDA8 1641 aa13.08□□□□□ -0.32
TIMP2-202ENST00000536189 CFAP65Q6ZU64 1925 aaKnown RBP13.08□□□□□ -0.32
TIMP2-202ENST00000536189 MAP3K4Q9Y6R4 1608 aa13.08□□□□□ -0.32
TIMP2-202ENST00000536189 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
TIMP2-202ENST00000536189 FBXO31Q5XUX0 539 aaPredicted RBP13.07□□□□□ -0.32
TIMP2-202ENST00000536189 TRPM2O94759 1503 aa13.07□□□□□ -0.32
TIMP2-202ENST00000536189 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
TIMP2-202ENST00000536189 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
TIMP2-202ENST00000536189 TET3O43151 1660 aa13.07□□□□□ -0.32
TIMP2-202ENST00000536189 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
TIMP2-202ENST00000536189 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
TIMP2-202ENST00000536189 GLI2P10070 1586 aa13.06□□□□□ -0.32
TIMP2-202ENST00000536189 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
TIMP2-202ENST00000536189 CEBPAP49715 358 aaPredicted RBP13.05□□□□□ -0.32
TIMP2-202ENST00000536189 IDI1Q13907 227 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms