RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 ADGRL1O94910 1474 aa11.77□□□□□ -0.52
COL21A1-212ENST00000535941 TRPM2O94759 1503 aa11.76□□□□□ -0.53
COL21A1-212ENST00000535941 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
COL21A1-212ENST00000535941 RRP7BPQ9NSQ0 103 aa11.75□□□□□ -0.53
COL21A1-212ENST00000535941 TRPM1Q7Z4N2 1603 aa11.75□□□□□ -0.53
COL21A1-212ENST00000535941 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
COL21A1-212ENST00000535941 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
COL21A1-212ENST00000535941 PIK3C2BO00750 1634 aa11.73□□□□□ -0.53
COL21A1-212ENST00000535941 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
COL21A1-212ENST00000535941 EFCAB6Q5THR3 1501 aa11.73□□□□□ -0.53
COL21A1-212ENST00000535941 HNRNPMP52272 730 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL21A1-212ENST00000535941 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
COL21A1-212ENST00000535941 PTPRTO14522 1441 aa11.72□□□□□ -0.53
COL21A1-212ENST00000535941 CD109Q6YHK3 1445 aa11.72□□□□□ -0.53
COL21A1-212ENST00000535941 CHIC2Q9UKJ5 165 aa11.71□□□□□ -0.53
COL21A1-212ENST00000535941 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.53
COL21A1-212ENST00000535941 CLTCL1P53675 1640 aa11.71□□□□□ -0.53
COL21A1-212ENST00000535941 EFCAB2Q5VUJ9 269 aa11.71□□□□□ -0.53
COL21A1-212ENST00000535941 PRKCSHP14314 528 aaPredicted RBP11.7□□□□□ -0.54
COL21A1-212ENST00000535941 MROH2AA6NES4 1674 aa11.7□□□□□ -0.54
COL21A1-212ENST00000535941 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
COL21A1-212ENST00000535941 SCAPERQ9BY12 1400 aa11.68□□□□□ -0.54
COL21A1-212ENST00000535941 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
COL21A1-212ENST00000535941 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
COL21A1-212ENST00000535941 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
COL21A1-212ENST00000535941 SPATA31E1Q6ZUB1 1445 aa11.67□□□□□ -0.54
COL21A1-212ENST00000535941 KIF1BO60333 1816 aa11.67□□□□□ -0.54
COL21A1-212ENST00000535941 DHX29Q7Z478 1369 aaKnown RBP11.66□□□□□ -0.54
COL21A1-212ENST00000535941 AGLP35573 1532 aa11.66□□□□□ -0.54
COL21A1-212ENST00000535941 IQGAP1P46940 1657 aa11.66□□□□□ -0.54
COL21A1-212ENST00000535941 PPLO60437 1756 aa11.66□□□□□ -0.54
COL21A1-212ENST00000535941 RALGAPBQ86X10 1494 aa11.65□□□□□ -0.54
COL21A1-212ENST00000535941 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.54
COL21A1-212ENST00000535941 TSPOAP1O95153 1857 aa11.65□□□□□ -0.54
COL21A1-212ENST00000535941 A2MP01023 1474 aa11.64□□□□□ -0.55
COL21A1-212ENST00000535941 ZNF777Q9ULD5 760 aaPredicted RBP11.64□□□□□ -0.55
COL21A1-212ENST00000535941 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
COL21A1-212ENST00000535941 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
COL21A1-212ENST00000535941 ABCC3O15438 1527 aa11.64□□□□□ -0.55
COL21A1-212ENST00000535941 ADGRB3O60242 1522 aa11.62□□□□□ -0.55
COL21A1-212ENST00000535941 PREX1Q8TCU6 1659 aa11.62□□□□□ -0.55
COL21A1-212ENST00000535941 NUP155O75694 1391 aa11.62□□□□□ -0.55
COL21A1-212ENST00000535941 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
COL21A1-212ENST00000535941 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
COL21A1-212ENST00000535941 SYNMO15061 1565 aa11.61□□□□□ -0.55
COL21A1-212ENST00000535941 MYO3AQ8NEV4 1616 aa11.6□□□□□ -0.55
COL21A1-212ENST00000535941 TONSLQ96HA7 1378 aa11.6□□□□□ -0.55
COL21A1-212ENST00000535941 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
COL21A1-212ENST00000535941 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
COL21A1-212ENST00000535941 ARHGAP31Q2M1Z3 1444 aa11.59□□□□□ -0.55
COL21A1-212ENST00000535941 MYOM2P54296 1465 aa11.57□□□□□ -0.56
COL21A1-212ENST00000535941 AFAP1Q8N556 730 aa11.57□□□□□ -0.56
COL21A1-212ENST00000535941 GPRASP1Q5JY77 1395 aa11.57□□□□□ -0.56
COL21A1-212ENST00000535941 MYO5BQ9ULV0 1848 aa11.57□□□□□ -0.56
COL21A1-212ENST00000535941 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
COL21A1-212ENST00000535941 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
COL21A1-212ENST00000535941 PKD2Q13563 968 aa11.55□□□□□ -0.56
COL21A1-212ENST00000535941 NOS1P29475 1434 aa11.55□□□□□ -0.56
COL21A1-212ENST00000535941 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL21A1-212ENST00000535941 FOXD1Q16676 465 aa11.54□□□□□ -0.56
COL21A1-212ENST00000535941 SETD1AO15047 1707 aaKnown RBP11.54□□□□□ -0.56
COL21A1-212ENST00000535941 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
COL21A1-212ENST00000535941 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
COL21A1-212ENST00000535941 L3MBTL2Q969R5 705 aa11.53□□□□□ -0.56
COL21A1-212ENST00000535941 TRIM52Q96A61 297 aa11.53□□□□□ -0.56
COL21A1-212ENST00000535941 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
COL21A1-212ENST00000535941 TMEM131LA2VDJ0 1609 aa11.53□□□□□ -0.56
COL21A1-212ENST00000535941 YEATS2Q9ULM3 1422 aa11.53□□□□□ -0.56
COL21A1-212ENST00000535941 CLTCQ00610 1675 aaKnown RBP11.53□□□□□ -0.56
COL21A1-212ENST00000535941 SPATA31D1Q6ZQQ2 1576 aa11.52□□□□□ -0.56
COL21A1-212ENST00000535941 NBPF8Q3BBV2 869 aa11.52□□□□□ -0.57
COL21A1-212ENST00000535941 NPATQ14207 1427 aa11.51□□□□□ -0.57
COL21A1-212ENST00000535941 CNTLNQ9NXG0 1405 aa11.51□□□□□ -0.57
COL21A1-212ENST00000535941 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
COL21A1-212ENST00000535941 UGGT1Q9NYU2 1555 aa11.51□□□□□ -0.57
COL21A1-212ENST00000535941 MYOM1P52179 1685 aa11.51□□□□□ -0.57
COL21A1-212ENST00000535941 DIEXFQ68CQ4 756 aaKnown RBP11.5□□□□□ -0.57
COL21A1-212ENST00000535941 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
COL21A1-212ENST00000535941 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
COL21A1-212ENST00000535941 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
COL21A1-212ENST00000535941 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
COL21A1-212ENST00000535941 ADGRB1O14514 1584 aa11.46□□□□□ -0.58
COL21A1-212ENST00000535941 ARHGEF28Q8N1W1 1705 aaKnown RBP11.45□□□□□ -0.58
COL21A1-212ENST00000535941 KANK1Q14678 1352 aa11.45□□□□□ -0.58
COL21A1-212ENST00000535941 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
COL21A1-212ENST00000535941 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
COL21A1-212ENST00000535941 ERVK-7P63135 1459 aa11.42□□□□□ -0.58
COL21A1-212ENST00000535941 ZFYVE9O95405 1425 aa11.42□□□□□ -0.58
COL21A1-212ENST00000535941 KNDC1Q76NI1 1749 aa11.41□□□□□ -0.58
COL21A1-212ENST00000535941 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
COL21A1-212ENST00000535941 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
COL21A1-212ENST00000535941 PIK3C2GO75747 1445 aa11.41□□□□□ -0.58
COL21A1-212ENST00000535941 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
COL21A1-212ENST00000535941 ARID4BQ4LE39 1312 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-212ENST00000535941 C3P01024 1663 aa11.4□□□□□ -0.58
COL21A1-212ENST00000535941 ASXL1Q8IXJ9 1541 aa11.4□□□□□ -0.58
COL21A1-212ENST00000535941 CENPBP07199 599 aaPredicted RBP11.4□□□□□ -0.58
COL21A1-212ENST00000535941 WASHC2AQ641Q2 1341 aa11.4□□□□□ -0.59
COL21A1-212ENST00000535941 CCDC7Q96M83 1385 aa11.4□□□□□ -0.59
COL21A1-212ENST00000535941 FER1L4A9Z1Z3 1794 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms