RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 KIF3BO15066 747 aa25.6■■□□□ 1.69
HTATSF1-204ENST00000535601 CCDC144AA2RUR9 1427 aa25.59■■□□□ 1.69
HTATSF1-204ENST00000535601 CD109Q6YHK3 1445 aa25.57■■□□□ 1.68
HTATSF1-204ENST00000535601 ERBINQ96RT1 1412 aa25.56■■□□□ 1.68
HTATSF1-204ENST00000535601 ATP7AQ04656 1500 aa25.55■■□□□ 1.68
HTATSF1-204ENST00000535601 USP47Q96K76 1375 aa25.55■■□□□ 1.68
HTATSF1-204ENST00000535601 IQGAP3Q86VI3 1631 aa25.54■■□□□ 1.68
HTATSF1-204ENST00000535601 CARD11Q9BXL7 1154 aa25.54■■□□□ 1.68
HTATSF1-204ENST00000535601 ARAP3Q8WWN8 1544 aa25.54■■□□□ 1.68
HTATSF1-204ENST00000535601 KIF7Q2M1P5 1343 aa25.54■■□□□ 1.68
HTATSF1-204ENST00000535601 CCDC7Q96M83 1385 aa25.53■■□□□ 1.68
HTATSF1-204ENST00000535601 SPATA31E1Q6ZUB1 1445 aa25.53■■□□□ 1.68
HTATSF1-204ENST00000535601 RAPGEF3O95398 923 aa25.53■■□□□ 1.68
HTATSF1-204ENST00000535601 NBPF1Q3BBV0 1214 aa25.5■■□□□ 1.67
HTATSF1-204ENST00000535601 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
HTATSF1-204ENST00000535601 BCORL1Q5H9F3 1711 aa25.48■■□□□ 1.67
HTATSF1-204ENST00000535601 RTEL1-TNFRSF6BF6WH68 1400 aa25.47■■□□□ 1.67
HTATSF1-204ENST00000535601 MAGI2Q86UL8 1455 aa25.46■■□□□ 1.67
HTATSF1-204ENST00000535601 CFAP65Q6ZU64 1925 aaKnown RBP25.45■■□□□ 1.67
HTATSF1-204ENST00000535601 ST20-MTHFSA0A0A6YYL1 179 aa25.45■■□□□ 1.67
HTATSF1-204ENST00000535601 E9PCH4 1651 aa25.45■■□□□ 1.66
HTATSF1-204ENST00000535601 KIDINS220Q9ULH0 1771 aa25.44■■□□□ 1.66
HTATSF1-204ENST00000535601 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
HTATSF1-204ENST00000535601 A2MP01023 1474 aa25.43■■□□□ 1.66
HTATSF1-204ENST00000535601 ROCK2O75116 1388 aaKnown RBP25.43■■□□□ 1.66
HTATSF1-204ENST00000535601 GGT6Q6P531 493 aa25.42■■□□□ 1.66
HTATSF1-204ENST00000535601 KDM5CP41229 1560 aa25.41■■□□□ 1.66
HTATSF1-204ENST00000535601 UHRF1BP1Q6BDS2 1440 aa25.41■■□□□ 1.66
HTATSF1-204ENST00000535601 CNTLNQ9NXG0 1405 aa25.41■■□□□ 1.66
HTATSF1-204ENST00000535601 RALGAPBQ86X10 1494 aa25.41■■□□□ 1.66
HTATSF1-204ENST00000535601 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
HTATSF1-204ENST00000535601 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
HTATSF1-204ENST00000535601 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
HTATSF1-204ENST00000535601 DHX29Q7Z478 1369 aaKnown RBP25.39■■□□□ 1.66
HTATSF1-204ENST00000535601 ZNF518AQ6AHZ1 1483 aa25.38■■□□□ 1.65
HTATSF1-204ENST00000535601 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
HTATSF1-204ENST00000535601 ATP10AO60312 1499 aa25.37■■□□□ 1.65
HTATSF1-204ENST00000535601 UGGT1Q9NYU2 1555 aa25.36■■□□□ 1.65
HTATSF1-204ENST00000535601 CCER2I3L3R5 266 aa25.35■■□□□ 1.65
HTATSF1-204ENST00000535601 POGZQ7Z3K3 1410 aa25.35■■□□□ 1.65
HTATSF1-204ENST00000535601 FAM69CQ0P6D2 419 aa25.34■■□□□ 1.65
HTATSF1-204ENST00000535601 KANK1Q14678 1352 aa25.33■■□□□ 1.65
HTATSF1-204ENST00000535601 DEPDC5O75140 1603 aa25.32■■□□□ 1.64
HTATSF1-204ENST00000535601 MROH1Q8NDA8 1641 aa25.32■■□□□ 1.64
HTATSF1-204ENST00000535601 TSPOAP1O95153 1857 aa25.31■■□□□ 1.64
HTATSF1-204ENST00000535601 TRPM1Q7Z4N2 1603 aa25.3■■□□□ 1.64
HTATSF1-204ENST00000535601 PRKRIP1Q9H875 184 aaPredicted RBP25.29■■□□□ 1.64
HTATSF1-204ENST00000535601 CLTCL1P53675 1640 aa25.29■■□□□ 1.64
HTATSF1-204ENST00000535601 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
HTATSF1-204ENST00000535601 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
HTATSF1-204ENST00000535601 CEP152O94986 1710 aa25.28■■□□□ 1.64
HTATSF1-204ENST00000535601 POLR1AO95602 1720 aaPredicted RBP25.28■■□□□ 1.64
HTATSF1-204ENST00000535601 CHGAP10645 457 aaKnown RBP25.28■■□□□ 1.64
HTATSF1-204ENST00000535601 SENP3-EIF4A1A0A087X0R7 540 aa25.27■■□□□ 1.64
HTATSF1-204ENST00000535601 TET3O43151 1660 aa25.26■■□□□ 1.63
HTATSF1-204ENST00000535601 ABCA6Q8N139 1617 aa25.25■■□□□ 1.63
HTATSF1-204ENST00000535601 FRMPD1Q5SYB0 1578 aa25.25■■□□□ 1.63
HTATSF1-204ENST00000535601 FAM9BQ8IZU0 186 aa25.24■■□□□ 1.63
HTATSF1-204ENST00000535601 HECW2Q9P2P5 1572 aa25.24■■□□□ 1.63
HTATSF1-204ENST00000535601 TRPM2O94759 1503 aa25.23■■□□□ 1.63
HTATSF1-204ENST00000535601 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
HTATSF1-204ENST00000535601 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
HTATSF1-204ENST00000535601 CFAP74Q9C0B2 1584 aa25.22■■□□□ 1.63
HTATSF1-204ENST00000535601 YEATS2Q9ULM3 1422 aa25.22■■□□□ 1.63
HTATSF1-204ENST00000535601 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
HTATSF1-204ENST00000535601 HNRNPUQ00839 825 aaKnown RBP eCLIP25.21■■□□□ 1.63
HTATSF1-204ENST00000535601 MRS2Q9HD23 443 aa25.2■■□□□ 1.62
HTATSF1-204ENST00000535601 PTPRTO14522 1441 aa25.2■■□□□ 1.62
HTATSF1-204ENST00000535601 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
HTATSF1-204ENST00000535601 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
HTATSF1-204ENST00000535601 NUTM2DQ5VT03 806 aaPredicted RBP25.18■■□□□ 1.62
HTATSF1-204ENST00000535601 MLH3Q9UHC1 1453 aa25.18■■□□□ 1.62
HTATSF1-204ENST00000535601 MAP3K4Q9Y6R4 1608 aa25.17■■□□□ 1.62
HTATSF1-204ENST00000535601 NEO1Q92859 1461 aa25.16■■□□□ 1.62
HTATSF1-204ENST00000535601 EFCAB6Q5THR3 1501 aa25.15■■□□□ 1.62
HTATSF1-204ENST00000535601 DISP3Q9P2K9 1392 aa25.15■■□□□ 1.62
HTATSF1-204ENST00000535601 ADGRF5Q8IZF2 1346 aa25.13■■□□□ 1.61
HTATSF1-204ENST00000535601 RICTORQ6R327 1708 aa25.13■■□□□ 1.61
HTATSF1-204ENST00000535601 CFAP70Q5T0N1 1121 aa25.12■■□□□ 1.61
HTATSF1-204ENST00000535601 TESK2Q96S53 571 aa25.12■■□□□ 1.61
HTATSF1-204ENST00000535601 NPATQ14207 1427 aa25.12■■□□□ 1.61
HTATSF1-204ENST00000535601 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
HTATSF1-204ENST00000535601 DIP2CQ9Y2E4 1556 aa25.11■■□□□ 1.61
HTATSF1-204ENST00000535601 GPRASP1Q5JY77 1395 aa25.1■■□□□ 1.61
HTATSF1-204ENST00000535601 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
HTATSF1-204ENST00000535601 DIP2BQ9P265 1576 aa25.09■■□□□ 1.61
HTATSF1-204ENST00000535601 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.61
HTATSF1-204ENST00000535601 KIF1BO60333 1816 aa25.05■■□□□ 1.6
HTATSF1-204ENST00000535601 MLECQ14165 292 aa25.05■■□□□ 1.6
HTATSF1-204ENST00000535601 BCANQ96GW7 911 aa25.04■■□□□ 1.6
HTATSF1-204ENST00000535601 ABCC3O15438 1527 aa25.03■■□□□ 1.6
HTATSF1-204ENST00000535601 SUPT16HQ9Y5B9 1047 aaKnown RBP25.03■■□□□ 1.6
HTATSF1-204ENST00000535601 SIGLEC1Q9BZZ2 1709 aa25.02■■□□□ 1.6
HTATSF1-204ENST00000535601 ARID4BQ4LE39 1312 aaPredicted RBP25.01■■□□□ 1.59
HTATSF1-204ENST00000535601 NOS1P29475 1434 aa25.01■■□□□ 1.59
HTATSF1-204ENST00000535601 CC2D1BQ5T0F9 858 aaKnown RBP25.01■■□□□ 1.59
HTATSF1-204ENST00000535601 GLI2P10070 1586 aa24.99■■□□□ 1.59
HTATSF1-204ENST00000535601 PANK3Q9H999 370 aa24.99■■□□□ 1.59
HTATSF1-204ENST00000535601 COL17A1Q9UMD9 1497 aaPredicted RBP24.98■■□□□ 1.59
HTATSF1-204ENST00000535601 FBXO31Q5XUX0 539 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms