RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
LINC00943-203ENST00000535544 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
LINC00943-203ENST00000535544 BCORL1Q5H9F3 1711 aa12.83□□□□□ -0.36
LINC00943-203ENST00000535544 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.36
LINC00943-203ENST00000535544 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
LINC00943-203ENST00000535544 PLXNC1O60486 1568 aa12.83□□□□□ -0.36
LINC00943-203ENST00000535544 USP47Q96K76 1375 aa12.83□□□□□ -0.36
LINC00943-203ENST00000535544 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
LINC00943-203ENST00000535544 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
LINC00943-203ENST00000535544 ZFYVE16Q7Z3T8 1539 aa12.81□□□□□ -0.36
LINC00943-203ENST00000535544 UNC13BO14795 1591 aa12.81□□□□□ -0.36
LINC00943-203ENST00000535544 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
LINC00943-203ENST00000535544 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
LINC00943-203ENST00000535544 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
LINC00943-203ENST00000535544 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
LINC00943-203ENST00000535544 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
LINC00943-203ENST00000535544 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
LINC00943-203ENST00000535544 A2MP01023 1474 aa12.77□□□□□ -0.36
LINC00943-203ENST00000535544 UHRF1BP1Q6BDS2 1440 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 GGT6Q6P531 493 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 KDM5CP41229 1560 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 RTEL1-TNFRSF6BF6WH68 1400 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 CNTLNQ9NXG0 1405 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 ROCK2O75116 1388 aaKnown RBP12.76□□□□□ -0.37
LINC00943-203ENST00000535544 E9PCH4 1651 aa12.76□□□□□ -0.37
LINC00943-203ENST00000535544 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
LINC00943-203ENST00000535544 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
LINC00943-203ENST00000535544 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
LINC00943-203ENST00000535544 KIDINS220Q9ULH0 1771 aa12.75□□□□□ -0.37
LINC00943-203ENST00000535544 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
LINC00943-203ENST00000535544 PRAG1Q86YV5 1406 aa12.74□□□□□ -0.37
LINC00943-203ENST00000535544 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
LINC00943-203ENST00000535544 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
LINC00943-203ENST00000535544 RALGAPBQ86X10 1494 aa12.74□□□□□ -0.37
LINC00943-203ENST00000535544 INO80Q9ULG1 1556 aaPredicted RBP12.74□□□□□ -0.37
LINC00943-203ENST00000535544 ATP10AO60312 1499 aa12.73□□□□□ -0.37
LINC00943-203ENST00000535544 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
LINC00943-203ENST00000535544 FAM69CQ0P6D2 419 aa12.7□□□□□ -0.38
LINC00943-203ENST00000535544 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
LINC00943-203ENST00000535544 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
LINC00943-203ENST00000535544 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
LINC00943-203ENST00000535544 TRPM1Q7Z4N2 1603 aa12.69□□□□□ -0.38
LINC00943-203ENST00000535544 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
LINC00943-203ENST00000535544 HNRNPUQ00839 825 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00943-203ENST00000535544 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
LINC00943-203ENST00000535544 NUTM2DQ5VT03 806 aaPredicted RBP12.68□□□□□ -0.38
LINC00943-203ENST00000535544 CLTCL1P53675 1640 aa12.68□□□□□ -0.38
LINC00943-203ENST00000535544 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
LINC00943-203ENST00000535544 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
LINC00943-203ENST00000535544 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
LINC00943-203ENST00000535544 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
LINC00943-203ENST00000535544 TESK2Q96S53 571 aa12.67□□□□□ -0.38
LINC00943-203ENST00000535544 FRMPD1Q5SYB0 1578 aa12.66□□□□□ -0.38
LINC00943-203ENST00000535544 POLR1AO95602 1720 aaPredicted RBP12.66□□□□□ -0.38
LINC00943-203ENST00000535544 TSPOAP1O95153 1857 aa12.66□□□□□ -0.38
LINC00943-203ENST00000535544 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
LINC00943-203ENST00000535544 PTPRTO14522 1441 aa12.66□□□□□ -0.38
LINC00943-203ENST00000535544 YEATS2Q9ULM3 1422 aa12.66□□□□□ -0.38
LINC00943-203ENST00000535544 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
LINC00943-203ENST00000535544 SUPT16HQ9Y5B9 1047 aaKnown RBP12.66□□□□□ -0.38
LINC00943-203ENST00000535544 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
LINC00943-203ENST00000535544 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
LINC00943-203ENST00000535544 CEP152O94986 1710 aa12.65□□□□□ -0.38
LINC00943-203ENST00000535544 KANK1Q14678 1352 aa12.65□□□□□ -0.38
LINC00943-203ENST00000535544 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
LINC00943-203ENST00000535544 BCANQ96GW7 911 aa12.65□□□□□ -0.38
LINC00943-203ENST00000535544 VWDEQ8N2E2 1590 aa12.65□□□□□ -0.39
LINC00943-203ENST00000535544 WASHC2CQ9Y4E1 1318 aa12.63□□□□□ -0.39
LINC00943-203ENST00000535544 ABCA6Q8N139 1617 aa12.63□□□□□ -0.39
LINC00943-203ENST00000535544 TET3O43151 1660 aa12.63□□□□□ -0.39
LINC00943-203ENST00000535544 TRPM2O94759 1503 aa12.63□□□□□ -0.39
LINC00943-203ENST00000535544 PPRC1Q5VV67 1664 aaKnown RBP12.63□□□□□ -0.39
LINC00943-203ENST00000535544 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
LINC00943-203ENST00000535544 MLH3Q9UHC1 1453 aa12.61□□□□□ -0.39
LINC00943-203ENST00000535544 NPATQ14207 1427 aa12.61□□□□□ -0.39
LINC00943-203ENST00000535544 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
LINC00943-203ENST00000535544 FKBP8Q14318 412 aa12.59□□□□□ -0.39
LINC00943-203ENST00000535544 PER1O15534 1290 aaPredicted RBP12.59□□□□□ -0.39
LINC00943-203ENST00000535544 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
LINC00943-203ENST00000535544 CC2D1BQ5T0F9 858 aaKnown RBP12.59□□□□□ -0.39
LINC00943-203ENST00000535544 PANK3Q9H999 370 aa12.59□□□□□ -0.39
LINC00943-203ENST00000535544 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.4
LINC00943-203ENST00000535544 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.4
LINC00943-203ENST00000535544 FBXO31Q5XUX0 539 aaPredicted RBP12.58□□□□□ -0.4
LINC00943-203ENST00000535544 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
LINC00943-203ENST00000535544 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
LINC00943-203ENST00000535544 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
LINC00943-203ENST00000535544 EIF2AK4Q9P2K8 1649 aaKnown RBP12.57□□□□□ -0.4
LINC00943-203ENST00000535544 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
LINC00943-203ENST00000535544 MLECQ14165 292 aa12.57□□□□□ -0.4
LINC00943-203ENST00000535544 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
LINC00943-203ENST00000535544 SIGLEC1Q9BZZ2 1709 aa12.56□□□□□ -0.4
LINC00943-203ENST00000535544 NEO1Q92859 1461 aa12.56□□□□□ -0.4
LINC00943-203ENST00000535544 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
LINC00943-203ENST00000535544 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
LINC00943-203ENST00000535544 IDI1Q13907 227 aa12.55□□□□□ -0.4
LINC00943-203ENST00000535544 NOS1P29475 1434 aa12.55□□□□□ -0.4
LINC00943-203ENST00000535544 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
LINC00943-203ENST00000535544 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms