RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 KIF15Q9NS87 1388 aa11.98□□□□□ -0.49
KPNB1-202ENST00000535458 SMG6Q86US8 1419 aaKnown RBP11.98□□□□□ -0.49
KPNB1-202ENST00000535458 ROCK2O75116 1388 aaKnown RBP11.98□□□□□ -0.49
KPNB1-202ENST00000535458 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
KPNB1-202ENST00000535458 DCAF11Q8TEB1 546 aa11.98□□□□□ -0.49
KPNB1-202ENST00000535458 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
KPNB1-202ENST00000535458 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
KPNB1-202ENST00000535458 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
KPNB1-202ENST00000535458 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
KPNB1-202ENST00000535458 PNISRQ8TF01 805 aaKnown RBP11.96□□□□□ -0.5
KPNB1-202ENST00000535458 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.5
KPNB1-202ENST00000535458 PTPRGP23470 1445 aa11.95□□□□□ -0.5
KPNB1-202ENST00000535458 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
KPNB1-202ENST00000535458 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
KPNB1-202ENST00000535458 ARHGEF5Q12774 1597 aa11.94□□□□□ -0.5
KPNB1-202ENST00000535458 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
KPNB1-202ENST00000535458 RTL5Q5HYW3 569 aaPredicted RBP11.93□□□□□ -0.5
KPNB1-202ENST00000535458 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
KPNB1-202ENST00000535458 RNF123Q5XPI4 1314 aa11.92□□□□□ -0.5
KPNB1-202ENST00000535458 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
KPNB1-202ENST00000535458 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
KPNB1-202ENST00000535458 SAMD9LQ8IVG5 1584 aa11.91□□□□□ -0.5
KPNB1-202ENST00000535458 NOP58Q9Y2X3 529 aaKnown RBP11.91□□□□□ -0.5
KPNB1-202ENST00000535458 FAM135AQ9P2D6 1515 aa11.91□□□□□ -0.5
KPNB1-202ENST00000535458 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
KPNB1-202ENST00000535458 MYBBP1AQ9BQG0 1328 aaKnown RBP11.9□□□□□ -0.5
KPNB1-202ENST00000535458 CDC42BPBQ9Y5S2 1711 aa11.9□□□□□ -0.5
KPNB1-202ENST00000535458 RALBP1Q15311 655 aa11.9□□□□□ -0.5
KPNB1-202ENST00000535458 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
KPNB1-202ENST00000535458 RGL3Q3MIN7 710 aa11.89□□□□□ -0.51
KPNB1-202ENST00000535458 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
KPNB1-202ENST00000535458 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
KPNB1-202ENST00000535458 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
KPNB1-202ENST00000535458 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
KPNB1-202ENST00000535458 CCDC136Q96JN2 1154 aa11.88□□□□□ -0.51
KPNB1-202ENST00000535458 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
KPNB1-202ENST00000535458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.518e-8■■□□□ 11.8
KPNB1-202ENST00000535458 ANP32AP39687 249 aaKnown RBP11.87□□□□□ -0.51
KPNB1-202ENST00000535458 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
KPNB1-202ENST00000535458 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
KPNB1-202ENST00000535458 E9PCH4 1651 aa11.87□□□□□ -0.51
KPNB1-202ENST00000535458 SYCP2Q9BX26 1530 aa11.86□□□□□ -0.51
KPNB1-202ENST00000535458 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
KPNB1-202ENST00000535458 ANO8Q9HCE9 1232 aaPredicted RBP11.85□□□□□ -0.51
KPNB1-202ENST00000535458 PLA2R1Q13018 1463 aa11.85□□□□□ -0.51
KPNB1-202ENST00000535458 ARHGAP5Q13017 1502 aa11.85□□□□□ -0.51
KPNB1-202ENST00000535458 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
KPNB1-202ENST00000535458 ZBTB47Q9UFB7 747 aaPredicted RBP11.83□□□□□ -0.52
KPNB1-202ENST00000535458 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
KPNB1-202ENST00000535458 A2MP01023 1474 aa11.83□□□□□ -0.52
KPNB1-202ENST00000535458 UNC13BO14795 1591 aa11.83□□□□□ -0.52
KPNB1-202ENST00000535458 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
KPNB1-202ENST00000535458 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
KPNB1-202ENST00000535458 PARD3Q8TEW0 1356 aa11.83□□□□□ -0.52
KPNB1-202ENST00000535458 GPRASP1Q5JY77 1395 aa11.82□□□□□ -0.52
KPNB1-202ENST00000535458 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
KPNB1-202ENST00000535458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.525e-25■□□□□ 10.7
KPNB1-202ENST00000535458 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
KPNB1-202ENST00000535458 RRP1P56182 461 aaKnown RBP11.8□□□□□ -0.52
KPNB1-202ENST00000535458 TESK2Q96S53 571 aa11.8□□□□□ -0.52
KPNB1-202ENST00000535458 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
KPNB1-202ENST00000535458 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
KPNB1-202ENST00000535458 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
KPNB1-202ENST00000535458 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
KPNB1-202ENST00000535458 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
KPNB1-202ENST00000535458 IQGAP3Q86VI3 1631 aa11.79□□□□□ -0.52
KPNB1-202ENST00000535458 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
KPNB1-202ENST00000535458 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
KPNB1-202ENST00000535458 PRDM15P57071 1507 aaPredicted RBP11.78□□□□□ -0.52
KPNB1-202ENST00000535458 PLXNC1O60486 1568 aa11.78□□□□□ -0.52
KPNB1-202ENST00000535458 CYB5RLQ6IPT4 315 aa11.78□□□□□ -0.52
KPNB1-202ENST00000535458 PANK3Q9H999 370 aa11.78□□□□□ -0.52
KPNB1-202ENST00000535458 LAMC1P11047 1609 aa11.78□□□□□ -0.52
KPNB1-202ENST00000535458 MYO5CQ9NQX4 1742 aa11.77□□□□□ -0.52
KPNB1-202ENST00000535458 ERBINQ96RT1 1412 aa11.77□□□□□ -0.52
KPNB1-202ENST00000535458 WASHC2CQ9Y4E1 1318 aa11.77□□□□□ -0.52
KPNB1-202ENST00000535458 PDE3BQ13370 1112 aa11.77□□□□□ -0.52
KPNB1-202ENST00000535458 DUOX2Q9NRD8 1548 aa11.77□□□□□ -0.53
KPNB1-202ENST00000535458 EXOC6Q8TAG9 804 aa11.77□□□□□ -0.53
KPNB1-202ENST00000535458 TMF1P82094 1093 aa11.77□□□□□ -0.53
KPNB1-202ENST00000535458 ABCC2Q92887 1545 aa11.76□□□□□ -0.53
KPNB1-202ENST00000535458 EIF2AK4Q9P2K8 1649 aaKnown RBP11.76□□□□□ -0.53
KPNB1-202ENST00000535458 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
KPNB1-202ENST00000535458 UHRF1BP1LA0JNW5 1464 aa11.75□□□□□ -0.53
KPNB1-202ENST00000535458 ATP10AO60312 1499 aa11.75□□□□□ -0.53
KPNB1-202ENST00000535458 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
KPNB1-202ENST00000535458 EFCAB2Q5VUJ9 269 aa11.73□□□□□ -0.53
KPNB1-202ENST00000535458 IPO9Q96P70 1041 aaKnown RBP11.73□□□□□ -0.53
KPNB1-202ENST00000535458 ZCCHC11Q5TAX3 1644 aaKnown RBP11.73□□□□□ -0.53
KPNB1-202ENST00000535458 PLCH2O75038 1416 aa11.73□□□□□ -0.53
KPNB1-202ENST00000535458 PLPPR3Q6T4P5 718 aa11.73□□□□□ -0.53
KPNB1-202ENST00000535458 NEFMP07197 916 aa11.72□□□□□ -0.53
KPNB1-202ENST00000535458 BLMP54132 1417 aaPredicted RBP11.72□□□□□ -0.53
KPNB1-202ENST00000535458 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
KPNB1-202ENST00000535458 INSRP06213 1382 aa11.71□□□□□ -0.53
KPNB1-202ENST00000535458 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.53
KPNB1-202ENST00000535458 RNF17Q9BXT8 1623 aaKnown RBP11.7□□□□□ -0.54
KPNB1-202ENST00000535458 EIF5BO60841 1220 aaKnown RBP11.7□□□□□ -0.54
KPNB1-202ENST00000535458 ZMYM4Q5VZL5 1548 aa11.69□□□□□ -0.54
KPNB1-202ENST00000535458 PLIN1O60240 522 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms